| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923354
Identifier: 238923354
GI number: 238923354
Start: 870559
End: 871599
Strand: Direct
Name: 238923354
Synonym: EUBREC_0973
Alternate gene names: NA
Gene position: 870559-871599 (Clockwise)
Preceding gene: 238923353
Following gene: 238923357
Centisome position: 25.24
GC content: 41.5
Gene sequence:
>1041_bases ATGCAGGCTTACAAGGATTTAGTAAAAGCACTTCCCGGCTTAAAAGAGAATATGCCACGCGCATTTTACATGCTCGCAGA ACTCTTTGATTACGGTTCATTTGATATATGCAGAAGTGATGACAAATATATAATCCCATATATCATGAATGACGCGGTGG AATGCTATCTGACTGTGGAAAATGCAGTGTTAAAGGGCGATTATCAGAGTGAGGAAGAAATCATTTCGGCATCGTTGGTT TTAGGAAGTGAAAAAGGTTATGGACTCATTCTGCACCAACAGGACAATGTGATCACACTCTGGTTTGATAATTTGCATGT GCATGAGGCATGCTTTAAATACCATGAAATAGGACATTTCTGGGTAAAGGGACAGGAGCAGTGGCGCATGCTTGTATATA TGGTAGGAACAATCGCTGATAAGTATATGTACATGGGAAAGGAATACTGCAACGAGACAGAATGCTTTATACAGAGCCTT ATTTACTTTGCACCGTTTCGCAGATGGACACCGGTACCTGGCGATTTGATGGAGTATCATTTTCCGGCCCGTGTAGAGGG AATAGACATTATGGAGGAGCTTTGCAGGGAGGTTTCGGACATTGATTATCTTAAGCTCATTGCACGCTACAGGGCAAATC CATGTGAGAAAACGGAAAAGCTTTTGAGCAGACATTTAGCCGATGCAAAAAGAGTACCGCTTTATCAGTATATTTATAAG CTTGTGATAAAGGCATCAAAGGATTATCCTGAGAGAAATTACGGAAATCAGATAAATGAACGCATAAAAGAAAAGCGTAA AGCGCTTGAAAAGGAGCTGCTTCAAAAGGGATACACCGGAAAATACCCTGTGTTTTCAAAGAAAAATACGACTGTGCGTG TAATGGAGGAACAGCCCTACGTCACAGCAATTCTCGAGTGGGATGATTACAAATATAAGCAGCAGCTCATGGTTTCTGAG TGCAGTGCCAAAAAGTATGATGGAATAAATGCGGGATTTTTTAAAGGAATAGGCAGACACGGACGCATTGTGCAGGTGTA G
Upstream 100 bases:
>100_bases AAGTCCTGTTGCCCGTACTATTTACAAGGGTTTCAGAGGTTTTTATTACTTCTGAAATTCTTATTTTTTTATCATTTTTC CTATACGAAAGGATACCACA
Downstream 100 bases:
>100_bases ATACACATAAAACAAAAGCCACGGAGCAATCCGTGGCTTTCATAATACGCTTATTACAAGGATGGGCTTGAGAAGACTCG AACTTCCGACCTCACGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MQAYKDLVKALPGLKENMPRAFYMLAELFDYGSFDICRSDDKYIIPYIMNDAVECYLTVENAVLKGDYQSEEEIISASLV LGSEKGYGLILHQQDNVITLWFDNLHVHEACFKYHEIGHFWVKGQEQWRMLVYMVGTIADKYMYMGKEYCNETECFIQSL IYFAPFRRWTPVPGDLMEYHFPARVEGIDIMEELCREVSDIDYLKLIARYRANPCEKTEKLLSRHLADAKRVPLYQYIYK LVIKASKDYPERNYGNQINERIKEKRKALEKELLQKGYTGKYPVFSKKNTTVRVMEEQPYVTAILEWDDYKYKQQLMVSE CSAKKYDGINAGFFKGIGRHGRIVQV
Sequences:
>Translated_346_residues MQAYKDLVKALPGLKENMPRAFYMLAELFDYGSFDICRSDDKYIIPYIMNDAVECYLTVENAVLKGDYQSEEEIISASLV LGSEKGYGLILHQQDNVITLWFDNLHVHEACFKYHEIGHFWVKGQEQWRMLVYMVGTIADKYMYMGKEYCNETECFIQSL IYFAPFRRWTPVPGDLMEYHFPARVEGIDIMEELCREVSDIDYLKLIARYRANPCEKTEKLLSRHLADAKRVPLYQYIYK LVIKASKDYPERNYGNQINERIKEKRKALEKELLQKGYTGKYPVFSKKNTTVRVMEEQPYVTAILEWDDYKYKQQLMVSE CSAKKYDGINAGFFKGIGRHGRIVQV >Mature_346_residues MQAYKDLVKALPGLKENMPRAFYMLAELFDYGSFDICRSDDKYIIPYIMNDAVECYLTVENAVLKGDYQSEEEIISASLV LGSEKGYGLILHQQDNVITLWFDNLHVHEACFKYHEIGHFWVKGQEQWRMLVYMVGTIADKYMYMGKEYCNETECFIQSL IYFAPFRRWTPVPGDLMEYHFPARVEGIDIMEELCREVSDIDYLKLIARYRANPCEKTEKLLSRHLADAKRVPLYQYIYK LVIKASKDYPERNYGNQINERIKEKRKALEKELLQKGYTGKYPVFSKKNTTVRVMEEQPYVTAILEWDDYKYKQQLMVSE CSAKKYDGINAGFFKGIGRHGRIVQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40701; Mature: 40701
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAYKDLVKALPGLKENMPRAFYMLAELFDYGSFDICRSDDKYIIPYIMNDAVECYLTVE CCHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCEEECCCCCEECCEECCCCEEEEEEEC NAVLKGDYQSEEEIISASLVLGSEKGYGLILHQQDNVITLWFDNLHVHEACFKYHEIGHF HHEECCCCCCHHHHHHHHHEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCE WVKGQEQWRMLVYMVGTIADKYMYMGKEYCNETECFIQSLIYFAPFRRWTPVPGDLMEYH EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCC FPARVEGIDIMEELCREVSDIDYLKLIARYRANPCEKTEKLLSRHLADAKRVPLYQYIYK CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LVIKASKDYPERNYGNQINERIKEKRKALEKELLQKGYTGKYPVFSKKNTTVRVMEEQPY HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCE VTAILEWDDYKYKQQLMVSECSAKKYDGINAGFFKGIGRHGRIVQV EEEEEECCCHHHHHHHHHHHHCCHHCCCCCCHHHHCCCCCCCEEEC >Mature Secondary Structure MQAYKDLVKALPGLKENMPRAFYMLAELFDYGSFDICRSDDKYIIPYIMNDAVECYLTVE CCHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCEEECCCCCEECCEECCCCEEEEEEEC NAVLKGDYQSEEEIISASLVLGSEKGYGLILHQQDNVITLWFDNLHVHEACFKYHEIGHF HHEECCCCCCHHHHHHHHHEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCE WVKGQEQWRMLVYMVGTIADKYMYMGKEYCNETECFIQSLIYFAPFRRWTPVPGDLMEYH EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCC FPARVEGIDIMEELCREVSDIDYLKLIARYRANPCEKTEKLLSRHLADAKRVPLYQYIYK CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LVIKASKDYPERNYGNQINERIKEKRKALEKELLQKGYTGKYPVFSKKNTTVRVMEEQPY HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCE VTAILEWDDYKYKQQLMVSECSAKKYDGINAGFFKGIGRHGRIVQV EEEEEECCCHHHHHHHHHHHHCCHHCCCCCCHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA