Click here to switch to the map view.

The map label for this gene is 238923302

Identifier: 238923302

GI number: 238923302

Start: 820135

End: 821007

Strand: Direct

Name: 238923302

Synonym: EUBREC_0919

Alternate gene names: NA

Gene position: 820135-821007 (Clockwise)

Preceding gene: 238923301

Following gene: 238923303

Centisome position: 23.77

GC content: 41.7

Gene sequence:

>873_bases
ATGTGGGTATTATATGCATTTGGATCCGCATTTTTTGCGGGTATAACATCAATACTGGCAAAGTGTGGTATCAAAAAAAC
TGATTCAAACGTAGCAACTGCAATCAGGACAATTGTAGTTTTGATTTTTTCATGGATTATGGTATTTGTGGTTAAAGCGC
AGGGGCAGATTACAGCTGTGTCAGCAAAGACATGGATATTTCTGATGCTTTCAGGAGTCGCTACCGGAGCCTCATGGCTC
TGTTATTTTAAAGCACTCCAGCTTGGCGATGTAAACAGAGTGGTGCCGATTGATAAATCAAGCACAATACTGACCATTAT
ACTTGCATTTATCTTTTTTAAAGAGGAGATAAACGTACTCAGGCTGGTATGTGTGGTGCTTATAGCAATTGGAACGTATA
TGATGATCACCAAAAAGGAGATATCACAGGAAGAGCAGAATAAGGCCAGGGGTTCCCATGGATGGCTGTTTTATGCAGTG
CTGTCTGCTGTTTTTGCCAGCTTCACCTCAATACTGGGAAAGGTCGGCATAGAGGGAATCAATTCTAATCTGGGAACTGC
AATAAGGACGATAGTGGTGCTTATTATGGCTTGGATAGTGGTATTTGCCACAGGAAAACAGCACACCATAAAGCATATAG
AGAAAAAAGAGCTTGGCTTTATCTGCCTTTCGGGACTTGCAACAGGCGGCTCATGGCTTTGCTATTACAAGGCACTGCAG
GACGGACTTGCGAGTGTCGTAGTGCCTATAGATAAGCTGAGCATAGTTGTGTCAATTGTGTTTTCATATTTCGTATTTAA
GGAAAAGCTGACGATTAAATCCTTTACAGGACTGGTGCTCATCATAGCAGGAACATTGATTATGCTGGTTTAA

Upstream 100 bases:

>100_bases
GTAAAAGAAGCCGTTCCTTGAACGGTTTTTTTGTATTTAGAAGAATGGAGGTTTCGAACTCCGGACAACGTAGTTGACCG
AAGCGTAGACAGAGAAAAAT

Downstream 100 bases:

>100_bases
ATATATAAAAACATCTTGACGTTTTTCTGTTTTTCTATTATCATTGTTAACCGAGGAAATATTTATAGTTGACAATTATA
ACGGATGATATGTATTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MWVLYAFGSAFFAGITSILAKCGIKKTDSNVATAIRTIVVLIFSWIMVFVVKAQGQITAVSAKTWIFLMLSGVATGASWL
CYFKALQLGDVNRVVPIDKSSTILTIILAFIFFKEEINVLRLVCVVLIAIGTYMMITKKEISQEEQNKARGSHGWLFYAV
LSAVFASFTSILGKVGIEGINSNLGTAIRTIVVLIMAWIVVFATGKQHTIKHIEKKELGFICLSGLATGGSWLCYYKALQ
DGLASVVVPIDKLSIVVSIVFSYFVFKEKLTIKSFTGLVLIIAGTLIMLV

Sequences:

>Translated_290_residues
MWVLYAFGSAFFAGITSILAKCGIKKTDSNVATAIRTIVVLIFSWIMVFVVKAQGQITAVSAKTWIFLMLSGVATGASWL
CYFKALQLGDVNRVVPIDKSSTILTIILAFIFFKEEINVLRLVCVVLIAIGTYMMITKKEISQEEQNKARGSHGWLFYAV
LSAVFASFTSILGKVGIEGINSNLGTAIRTIVVLIMAWIVVFATGKQHTIKHIEKKELGFICLSGLATGGSWLCYYKALQ
DGLASVVVPIDKLSIVVSIVFSYFVFKEKLTIKSFTGLVLIIAGTLIMLV
>Mature_290_residues
MWVLYAFGSAFFAGITSILAKCGIKKTDSNVATAIRTIVVLIFSWIMVFVVKAQGQITAVSAKTWIFLMLSGVATGASWL
CYFKALQLGDVNRVVPIDKSSTILTIILAFIFFKEEINVLRLVCVVLIAIGTYMMITKKEISQEEQNKARGSHGWLFYAV
LSAVFASFTSILGKVGIEGINSNLGTAIRTIVVLIMAWIVVFATGKQHTIKHIEKKELGFICLSGLATGGSWLCYYKALQ
DGLASVVVPIDKLSIVVSIVFSYFVFKEKLTIKSFTGLVLIIAGTLIMLV

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31703; Mature: 31703

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVLYAFGSAFFAGITSILAKCGIKKTDSNVATAIRTIVVLIFSWIMVFVVKAQGQITAV
CEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
SAKTWIFLMLSGVATGASWLCYFKALQLGDVNRVVPIDKSSTILTIILAFIFFKEEINVL
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
RLVCVVLIAIGTYMMITKKEISQEEQNKARGSHGWLFYAVLSAVFASFTSILGKVGIEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NSNLGTAIRTIVVLIMAWIVVFATGKQHTIKHIEKKELGFICLSGLATGGSWLCYYKALQ
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DGLASVVVPIDKLSIVVSIVFSYFVFKEKLTIKSFTGLVLIIAGTLIMLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWVLYAFGSAFFAGITSILAKCGIKKTDSNVATAIRTIVVLIFSWIMVFVVKAQGQITAV
CEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
SAKTWIFLMLSGVATGASWLCYFKALQLGDVNRVVPIDKSSTILTIILAFIFFKEEINVL
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
RLVCVVLIAIGTYMMITKKEISQEEQNKARGSHGWLFYAVLSAVFASFTSILGKVGIEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NSNLGTAIRTIVVLIMAWIVVFATGKQHTIKHIEKKELGFICLSGLATGGSWLCYYKALQ
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DGLASVVVPIDKLSIVVSIVFSYFVFKEKLTIKSFTGLVLIIAGTLIMLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]