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The map label for this gene is yqiI [H]

Identifier: 238923300

GI number: 238923300

Start: 817372

End: 818451

Strand: Direct

Name: yqiI [H]

Synonym: EUBREC_0911

Alternate gene names: 238923300

Gene position: 817372-818451 (Clockwise)

Preceding gene: 238923299

Following gene: 238923301

Centisome position: 23.69

GC content: 45.93

Gene sequence:

>1080_bases
ATGTACAGAAATATTCTAAAGATAATAACAGTATTTTTCGTTATGCTTGCACTTATCGTGCCGGTCACGCTTGAAAAGCT
TCCGGCTATAAATGAGAAGTATGATATGGCAAAAGCACTGGAGGATAATGTGCTGCAAAACTATGTCAAGGCTTCCACAG
ATGCAAAGCAGGAGAAGAACCCTGATGAGATATTGCAGAAGGGAGCCGGCTTTGAGGATGATTTAAGGATAGAGCTGCCG
GACGACTCAGAAGGGGAGCGCCAGAGTATATCGGTGGAAACCGATGCCCTGACGCAGACGGTCTATGTAAAGCTTAAGGC
TGATGTGGACAATTACTTTACGAAGTATTCCATGACAGGCAGGTCAAATCATATAGACTCCATGCAGTATTACCGCAAAG
GGGCAGATGGTGTGATAGCTATCACTACAGACAAGCTCTATCAGGTGAAGCAGCGCATAGAGAATGGATATCTTTATCTG
AGCTTTGTCAATCTGCATGATATATACGATAAGGTCATCATAATAGATGCAGGTCACGGCGGTCGTATGACCGGTGCCGT
GCGAAACGGAATAGAGGAAAAAAGCATCAATCTGGACATAGTGCTGGCACTTAAGGAACAGCTTGACAGCTATTCAGGTG
ACAAAAGGCTTGGGATATTCTACACCAGGACAACAGATACCAATCCTACACTGCAGCAGAGAGCGGCACTTGCCAATAAG
GCGGATGCGGATTTATTTATAAGCGTGCATTGCAACTCATATGAAAAGGGCAATTTCACCGCAGTTTCGGGTACGCAGGT
GCTCTACAGCCAGTCAGATAACAGAGAGCTCGGAAGTAAACATCTTGCACAGATTTGCATGGATAACGTGACAGCTGCGA
CAGGAAACAGGGCATTTGGGCTGCTTCCTGCAGATGACATATATATAATAAGAACAAGTGAGGCTCCGGTTGCGCTTGTG
GAGGTGGGCTTCATGACCAACAGACAGGAGCTTGACAATCTGGCCAATGCAGACTATCAGAAACAGGCAGCTCAGGGTAT
ATACAATGCAATCATGCAGGCCTTTGATGAGGGCTACTAG

Upstream 100 bases:

>100_bases
GGCGAGGGCTACATCAGCTATGATGGTGTGGCATATATCAATGTAAAGGAAAAACAGGATTGTAACCTCTGTATAAAGGC
CTTTTCTGATAACAGATGAT

Downstream 100 bases:

>100_bases
CTGTATCTGGAAATTGTCCGAATAGAAAAAGAAGGAAGGAAATATATTATGACAAAAATCATATTTGCAACAGGAAACAA
GGATAAGCTCAGAGAAATCA

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MYRNILKIITVFFVMLALIVPVTLEKLPAINEKYDMAKALEDNVLQNYVKASTDAKQEKNPDEILQKGAGFEDDLRIELP
DDSEGERQSISVETDALTQTVYVKLKADVDNYFTKYSMTGRSNHIDSMQYYRKGADGVIAITTDKLYQVKQRIENGYLYL
SFVNLHDIYDKVIIIDAGHGGRMTGAVRNGIEEKSINLDIVLALKEQLDSYSGDKRLGIFYTRTTDTNPTLQQRAALANK
ADADLFISVHCNSYEKGNFTAVSGTQVLYSQSDNRELGSKHLAQICMDNVTAATGNRAFGLLPADDIYIIRTSEAPVALV
EVGFMTNRQELDNLANADYQKQAAQGIYNAIMQAFDEGY

Sequences:

>Translated_359_residues
MYRNILKIITVFFVMLALIVPVTLEKLPAINEKYDMAKALEDNVLQNYVKASTDAKQEKNPDEILQKGAGFEDDLRIELP
DDSEGERQSISVETDALTQTVYVKLKADVDNYFTKYSMTGRSNHIDSMQYYRKGADGVIAITTDKLYQVKQRIENGYLYL
SFVNLHDIYDKVIIIDAGHGGRMTGAVRNGIEEKSINLDIVLALKEQLDSYSGDKRLGIFYTRTTDTNPTLQQRAALANK
ADADLFISVHCNSYEKGNFTAVSGTQVLYSQSDNRELGSKHLAQICMDNVTAATGNRAFGLLPADDIYIIRTSEAPVALV
EVGFMTNRQELDNLANADYQKQAAQGIYNAIMQAFDEGY
>Mature_359_residues
MYRNILKIITVFFVMLALIVPVTLEKLPAINEKYDMAKALEDNVLQNYVKASTDAKQEKNPDEILQKGAGFEDDLRIELP
DDSEGERQSISVETDALTQTVYVKLKADVDNYFTKYSMTGRSNHIDSMQYYRKGADGVIAITTDKLYQVKQRIENGYLYL
SFVNLHDIYDKVIIIDAGHGGRMTGAVRNGIEEKSINLDIVLALKEQLDSYSGDKRLGIFYTRTTDTNPTLQQRAALANK
ADADLFISVHCNSYEKGNFTAVSGTQVLYSQSDNRELGSKHLAQICMDNVTAATGNRAFGLLPADDIYIIRTSEAPVALV
EVGFMTNRQELDNLANADYQKQAAQGIYNAIMQAFDEGY

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788776, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 40145; Mature: 40145

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRNILKIITVFFVMLALIVPVTLEKLPAINEKYDMAKALEDNVLQNYVKASTDAKQEKN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDEILQKGAGFEDDLRIELPDDSEGERQSISVETDALTQTVYVKLKADVDNYFTKYSMTG
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEHHHEEEEEEEEEEECCCHHHHEEEECC
RSNHIDSMQYYRKGADGVIAITTDKLYQVKQRIENGYLYLSFVNLHDIYDKVIIIDAGHG
CCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEEEHHHHCCEEEEEECCCC
GRMTGAVRNGIEEKSINLDIVLALKEQLDSYSGDKRLGIFYTRTTDTNPTLQQRAALANK
CCCCHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCC
ADADLFISVHCNSYEKGNFTAVSGTQVLYSQSDNRELGSKHLAQICMDNVTAATGNRAFG
CCCEEEEEEEECCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
LLPADDIYIIRTSEAPVALVEVGFMTNRQELDNLANADYQKQAAQGIYNAIMQAFDEGY
CCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYRNILKIITVFFVMLALIVPVTLEKLPAINEKYDMAKALEDNVLQNYVKASTDAKQEKN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDEILQKGAGFEDDLRIELPDDSEGERQSISVETDALTQTVYVKLKADVDNYFTKYSMTG
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEHHHEEEEEEEEEEECCCHHHHEEEECC
RSNHIDSMQYYRKGADGVIAITTDKLYQVKQRIENGYLYLSFVNLHDIYDKVIIIDAGHG
CCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEEEHHHHCCEEEEEECCCC
GRMTGAVRNGIEEKSINLDIVLALKEQLDSYSGDKRLGIFYTRTTDTNPTLQQRAALANK
CCCCHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCC
ADADLFISVHCNSYEKGNFTAVSGTQVLYSQSDNRELGSKHLAQICMDNVTAATGNRAFG
CCCEEEEEEEECCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
LLPADDIYIIRTSEAPVALVEVGFMTNRQELDNLANADYQKQAAQGIYNAIMQAFDEGY
CCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]