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The map label for this gene is hsdS [C]

Identifier: 238923274

GI number: 238923274

Start: 787961

End: 788482

Strand: Direct

Name: hsdS [C]

Synonym: EUBREC_0885

Alternate gene names: 238923274

Gene position: 787961-788482 (Clockwise)

Preceding gene: 238923273

Following gene: 238923275

Centisome position: 22.84

GC content: 32.95

Gene sequence:

>522_bases
ATGAACTTTTCTAAAGAGGCTATGGGACATGGTTTTCCCTTTATTAACTTACAAAATATCTTTGGAAACAATGTAATTGA
TGTTAACAAATTGGAATTAGCTGATGCTACAGAAAAACAATTGTTAGAATATTCATTGCTAAAAGGAGATGTATTATTTG
TTCGTTCCTCAGTAAAACTGGAAGGAGTTGGTGAGGCAGCATTGGTGCCAGAAACCCTTGAAAATACAACTTATTCAGGA
TTTATTATTCGTTTTAGGGATGAATATGGACTAAATAATGATTTTAAAAAATATATATTTGGAACTCAAAAAGTACGAAA
TCAAATAATGGCTCAAGCAACCAACAGTGCGAATAAAAACATTAGTCAAGGTGTACTTGAAAATCTTACTTTTGAAGTAC
CATCATTTGATGAACAAGCAAAAATAGGAGAGCATTTCTCCAACCTCGACCACCTCATCACTCTTCACCAGCGCCAGACA
GATTTTTATAAAAAACCCAATTTCTACTTTATCTCATCGTAA

Upstream 100 bases:

>100_bases
CATCACTCGTTATTAGCGTAAGTCCATTGTGATATGGTGAATAAAACCAAAAGTTTGGGAACAGCGTAAGTTGGGGGAAC
TTGGTTCATTGAAGAACGGA

Downstream 100 bases:

>100_bases
GCCAATAAAAAATTATAAATGTTGAAAACGATTGGGAACAGCGTAAGTTTTCTGAATTGGTAACAATTGAGCGTGGTGGA
TCACCTAGACCGATAGATAA

Product: putative restriction and modification system specificity protein

Products: NA

Alternate protein names: Restriction Endonuclease S Subunit; Type I Restriction- System Protein Specificity Subunit; Type IC Specificity Subunit; Specificity Determinant HsdS; Type I Restriction DNA Specificity Protein; Restriction Endonuclease S; Type I Restriction- System Specificity Subunit; Type I Restriction DNA Specificity Family Protein; Restriction And System Specificity Protein; Restriction System DNA Specificity Domain Protein; Type I Restriction Specificity Protein; Restriction System DNA Specificity Domain

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MNFSKEAMGHGFPFINLQNIFGNNVIDVNKLELADATEKQLLEYSLLKGDVLFVRSSVKLEGVGEAALVPETLENTTYSG
FIIRFRDEYGLNNDFKKYIFGTQKVRNQIMAQATNSANKNISQGVLENLTFEVPSFDEQAKIGEHFSNLDHLITLHQRQT
DFYKKPNFYFISS

Sequences:

>Translated_173_residues
MNFSKEAMGHGFPFINLQNIFGNNVIDVNKLELADATEKQLLEYSLLKGDVLFVRSSVKLEGVGEAALVPETLENTTYSG
FIIRFRDEYGLNNDFKKYIFGTQKVRNQIMAQATNSANKNISQGVLENLTFEVPSFDEQAKIGEHFSNLDHLITLHQRQT
DFYKKPNFYFISS
>Mature_173_residues
MNFSKEAMGHGFPFINLQNIFGNNVIDVNKLELADATEKQLLEYSLLKGDVLFVRSSVKLEGVGEAALVPETLENTTYSG
FIIRFRDEYGLNNDFKKYIFGTQKVRNQIMAQATNSANKNISQGVLENLTFEVPSFDEQAKIGEHFSNLDHLITLHQRQT
DFYKKPNFYFISS

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19728; Mature: 19728

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSKEAMGHGFPFINLQNIFGNNVIDVNKLELADATEKQLLEYSLLKGDVLFVRSSVKL
CCCCCHHHCCCCCEEEEHHHCCCCEEECCCEECCCHHHHHHHHHHHHCCCEEEEECCEEE
EGVGEAALVPETLENTTYSGFIIRFRDEYGLNNDFKKYIFGTQKVRNQIMAQATNSANKN
CCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCC
ISQGVLENLTFEVPSFDEQAKIGEHFSNLDHLITLHQRQTDFYKKPNFYFISS
HHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MNFSKEAMGHGFPFINLQNIFGNNVIDVNKLELADATEKQLLEYSLLKGDVLFVRSSVKL
CCCCCHHHCCCCCEEEEHHHCCCCEEECCCEECCCHHHHHHHHHHHHCCCEEEEECCEEE
EGVGEAALVPETLENTTYSGFIIRFRDEYGLNNDFKKYIFGTQKVRNQIMAQATNSANKN
CCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCC
ISQGVLENLTFEVPSFDEQAKIGEHFSNLDHLITLHQRQTDFYKKPNFYFISS
HHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA