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The map label for this gene is fixB [H]

Identifier: 238923144

GI number: 238923144

Start: 681839

End: 682900

Strand: Direct

Name: fixB [H]

Synonym: EUBREC_0737

Alternate gene names: 238923144

Gene position: 681839-682900 (Clockwise)

Preceding gene: 238923143

Following gene: 238923146

Centisome position: 19.77

GC content: 47.18

Gene sequence:

>1062_bases
ATGGAGGAACCAAAAATGGGTTTAGAAGAATATAAGGGCGTATATATCTACGCACAGCAGGTAGACAATAAGCTTAGCGA
CATCGCCTTTGAGTTAGTCGGTAAAGCTAAAGAGTTAGCAGCAGATTTAAATACAGAGGTTACTGCAGTACTTCTTGGAT
CTAACGTAAAGGCTCTTGCAACAGAGCTCGGTGAGTACGGCGCAGATAAGGTAATCGTTGTAGACAATCCTGCACTTGAG
ACATACAGAACAGAGCCATACGCACAGGCTCTTGTATCAGTAATCAACGAGTACAAGCCGGAGATCATGTTAGTTGGTGC
AACAGCTATCGGACGTGACCTCGGACCAACAGTTTCAGCAAGAGTTAAGACTGGTCTTACAGCTGACTGTACAAAGCTTG
AGATTGGTGATTTCCCAATCAATGCTATGCCTGGACAGGAGCAGAAGCACAACCAGCTTCTCATGACACGTCCTGCATTC
GGTGGAAACACAATCGCAACAATCGCTTGTCCTGACAACCGTCCACAGATGGCAACAGTTCGTCCTGGTGTTATGCAGAA
GCTTCCTAAAGAGGCTGGCAGAGCAGCAGAGGTTATCGAGTTCAATCCTGCACTCGAGGAGAACAACCGTTATGTTGAGA
TCATGGATATCGTTAAGGCAGTTGGCAACGTAGAGAACATCATGGACGCTAAGGTACTTGTATCAGGCGGACGTGGAGTT
GGAAGCGCTGAGAACTTCGAGATGCTTCGTGACCTTGCTTCATGCTTCAAGGGTGGTATGGTATCATGCTCTCGTGCAGC
AGTAGAGAACGGCTGGTTAGCACAGGATTATCAGGTAGGACAGACAGGAAAGACTGTACGTCCACAGATTTACTTCGCAA
TCGGTATCTCAGGAGCCATCCAGCACGTAGCAGGTATGGAGGAGTCTGATCTCATCATCGCCATCAACAAGGACGAGGAT
GCTCCAATCTTCGACGTAGCTGATTACGGCTTAGTAGGAGATTTAAAGAAGATCGTTCCTCAGCTTACAGCAGCTCTTAA
AGAGGCAAATGCTGACGCATAA

Upstream 100 bases:

>100_bases
GACAAGGTACCTAAGGGAGCTGGAGAAAAGGTTAACCTTGATCCAACAGAGTCAGTAAACTATCTCATGGAGAAATTCAA
AGAGAAACATATCATCTAGT

Downstream 100 bases:

>100_bases
TCGCATAATAATGCAATAAAATTACATTACTAATACATTTAAACACAGTACTGTTTATCGCAGTGCTGTGTTTTTTTGAC
CATAAATATAGCGTAATCTT

Product: electron transfer flavoprotein alpha-subunit fixB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MEEPKMGLEEYKGVYIYAQQVDNKLSDIAFELVGKAKELAADLNTEVTAVLLGSNVKALATELGEYGADKVIVVDNPALE
TYRTEPYAQALVSVINEYKPEIMLVGATAIGRDLGPTVSARVKTGLTADCTKLEIGDFPINAMPGQEQKHNQLLMTRPAF
GGNTIATIACPDNRPQMATVRPGVMQKLPKEAGRAAEVIEFNPALEENNRYVEIMDIVKAVGNVENIMDAKVLVSGGRGV
GSAENFEMLRDLASCFKGGMVSCSRAAVENGWLAQDYQVGQTGKTVRPQIYFAIGISGAIQHVAGMEESDLIIAINKDED
APIFDVADYGLVGDLKKIVPQLTAALKEANADA

Sequences:

>Translated_353_residues
MEEPKMGLEEYKGVYIYAQQVDNKLSDIAFELVGKAKELAADLNTEVTAVLLGSNVKALATELGEYGADKVIVVDNPALE
TYRTEPYAQALVSVINEYKPEIMLVGATAIGRDLGPTVSARVKTGLTADCTKLEIGDFPINAMPGQEQKHNQLLMTRPAF
GGNTIATIACPDNRPQMATVRPGVMQKLPKEAGRAAEVIEFNPALEENNRYVEIMDIVKAVGNVENIMDAKVLVSGGRGV
GSAENFEMLRDLASCFKGGMVSCSRAAVENGWLAQDYQVGQTGKTVRPQIYFAIGISGAIQHVAGMEESDLIIAINKDED
APIFDVADYGLVGDLKKIVPQLTAALKEANADA
>Mature_353_residues
MEEPKMGLEEYKGVYIYAQQVDNKLSDIAFELVGKAKELAADLNTEVTAVLLGSNVKALATELGEYGADKVIVVDNPALE
TYRTEPYAQALVSVINEYKPEIMLVGATAIGRDLGPTVSARVKTGLTADCTKLEIGDFPINAMPGQEQKHNQLLMTRPAF
GGNTIATIACPDNRPQMATVRPGVMQKLPKEAGRAAEVIEFNPALEENNRYVEIMDIVKAVGNVENIMDAKVLVSGGRGV
GSAENFEMLRDLASCFKGGMVSCSRAAVENGWLAQDYQVGQTGKTVRPQIYFAIGISGAIQHVAGMEESDLIIAINKDED
APIFDVADYGLVGDLKKIVPQLTAALKEANADA

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=342, Percent_Identity=32.1637426900585, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI189181759, Length=293, Percent_Identity=34.8122866894198, Blast_Score=161, Evalue=1e-39,
Organism=Escherichia coli, GI1787990, Length=279, Percent_Identity=30.8243727598566, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786226, Length=323, Percent_Identity=30.6501547987616, Blast_Score=118, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17506929, Length=333, Percent_Identity=34.8348348348348, Blast_Score=171, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6325261, Length=309, Percent_Identity=31.0679611650485, Blast_Score=143, Evalue=5e-35,
Organism=Drosophila melanogaster, GI17136898, Length=339, Percent_Identity=33.9233038348083, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24652801, Length=339, Percent_Identity=33.9233038348083, Blast_Score=174, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 37897; Mature: 37897

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEPKMGLEEYKGVYIYAQQVDNKLSDIAFELVGKAKELAADLNTEVTAVLLGSNVKALA
CCCCCCCHHHHCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
TELGEYGADKVIVVDNPALETYRTEPYAQALVSVINEYKPEIMLVGATAIGRDLGPTVSA
HHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCHH
RVKTGLTADCTKLEIGDFPINAMPGQEQKHNQLLMTRPAFGGNTIATIACPDNRPQMATV
HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEE
RPGVMQKLPKEAGRAAEVIEFNPALEENNRYVEIMDIVKAVGNVENIMDAKVLVSGGRGV
CCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHHHHHHCCHHHHHCCEEEEECCCCC
GSAENFEMLRDLASCFKGGMVSCSRAAVENGWLAQDYQVGQTGKTVRPQIYFAIGISGAI
CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECHHHH
QHVAGMEESDLIIAINKDEDAPIFDVADYGLVGDLKKIVPQLTAALKEANADA
HHHHCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEEPKMGLEEYKGVYIYAQQVDNKLSDIAFELVGKAKELAADLNTEVTAVLLGSNVKALA
CCCCCCCHHHHCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
TELGEYGADKVIVVDNPALETYRTEPYAQALVSVINEYKPEIMLVGATAIGRDLGPTVSA
HHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCHH
RVKTGLTADCTKLEIGDFPINAMPGQEQKHNQLLMTRPAFGGNTIATIACPDNRPQMATV
HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEE
RPGVMQKLPKEAGRAAEVIEFNPALEENNRYVEIMDIVKAVGNVENIMDAKVLVSGGRGV
CCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHHHHHHCCHHHHHCCEEEEECCCCC
GSAENFEMLRDLASCFKGGMVSCSRAAVENGWLAQDYQVGQTGKTVRPQIYFAIGISGAI
CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECHHHH
QHVAGMEESDLIIAINKDEDAPIFDVADYGLVGDLKKIVPQLTAALKEANADA
HHHHCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7875566 [H]