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The map label for this gene is etfB [H]

Identifier: 238923143

GI number: 238923143

Start: 681055

End: 681837

Strand: Direct

Name: etfB [H]

Synonym: EUBREC_0736

Alternate gene names: 238923143

Gene position: 681055-681837 (Clockwise)

Preceding gene: 238923142

Following gene: 238923144

Centisome position: 19.74

GC content: 43.42

Gene sequence:

>783_bases
ATGAATATCGTAGTATGTATTAAACAGGTTCCTGATACAAAGGGTGGAGTAAAATTCAATCCTGACGGAACACTTGATAG
AGCTTCAATGCTTGCAATCATGAATCCAGATGACAAGGCTGGTCTTGAGGCAGCACTTAGAATCAAAGACGAGACAGGCG
CAAAGGTTACAGTCCTTACAATGGGACTTCCAAAGGCTGACGCAATCCTTCGTGAGGCAATGGCTATGGGCGCTGATGAT
GCAGTTTTAGTAACAGACAGAGTACTTGGTGGAGCTGATACATGGGCTACATCTACTACAATTGCAGGTGCATTAAGAAA
TCTCGATTATGATTTAATCATCACAGGCCGTCAGGCTATCGATGGAGATACAGCACAGGTTGGACCACAGATTGCAGTTC
ATCTTGGACTTCCTGTAATCTCATACGCAGAGGATATCAAGGTTGATGGAGATTCTGTAGTCGTTAAGCGTCAGTACGAG
GACAGATATCACGTAGTTAAGGCTAAGATGCCTTGTCTTATCACAGCTCTTTCAGAGTTAAATGAGCCTAGATATATGAC
ACCGGGCGGAATCTTCGATGCATTTGACAAAGAGGTAACTGTCTGGGGCAGAGCTGACCTTAAGGATGTTGACGATTCAG
ATCTTGGACTTAAGGGATCACCTACAAAGATTGCTAAGGCATCTGACAAGGTACCTAAGGGAGCTGGAGAAAAGGTTAAC
CTTGATCCAACAGAGTCAGTAAACTATCTCATGGAGAAATTCAAAGAGAAACATATCATCTAG

Upstream 100 bases:

>100_bases
AGAGGTTCAGCGTATGGTTATTTCAGGCTCATTACTCAGATAGTTAAGAGAGCTATCATAACTGTAGAGCTACTTAGAAT
AAATAAAGGAGAACAAATAC

Downstream 100 bases:

>100_bases
TATGGAGGAACCAAAAATGGGTTTAGAAGAATATAAGGGCGTATATATCTACGCACAGCAGGTAGACAATAAGCTTAGCG
ACATCGCCTTTGAGTTAGTC

Product: electron transfer flavoprotein beta-subunit (beta-ETF) (electrontransfer flavoprotein small subunit) (ETFSS)

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNIVVCIKQVPDTKGGVKFNPDGTLDRASMLAIMNPDDKAGLEAALRIKDETGAKVTVLTMGLPKADAILREAMAMGADD
AVLVTDRVLGGADTWATSTTIAGALRNLDYDLIITGRQAIDGDTAQVGPQIAVHLGLPVISYAEDIKVDGDSVVVKRQYE
DRYHVVKAKMPCLITALSELNEPRYMTPGGIFDAFDKEVTVWGRADLKDVDDSDLGLKGSPTKIAKASDKVPKGAGEKVN
LDPTESVNYLMEKFKEKHII

Sequences:

>Translated_260_residues
MNIVVCIKQVPDTKGGVKFNPDGTLDRASMLAIMNPDDKAGLEAALRIKDETGAKVTVLTMGLPKADAILREAMAMGADD
AVLVTDRVLGGADTWATSTTIAGALRNLDYDLIITGRQAIDGDTAQVGPQIAVHLGLPVISYAEDIKVDGDSVVVKRQYE
DRYHVVKAKMPCLITALSELNEPRYMTPGGIFDAFDKEVTVWGRADLKDVDDSDLGLKGSPTKIAKASDKVPKGAGEKVN
LDPTESVNYLMEKFKEKHII
>Mature_260_residues
MNIVVCIKQVPDTKGGVKFNPDGTLDRASMLAIMNPDDKAGLEAALRIKDETGAKVTVLTMGLPKADAILREAMAMGADD
AVLVTDRVLGGADTWATSTTIAGALRNLDYDLIITGRQAIDGDTAQVGPQIAVHLGLPVISYAEDIKVDGDSVVVKRQYE
DRYHVVKAKMPCLITALSELNEPRYMTPGGIFDAFDKEVTVWGRADLKDVDDSDLGLKGSPTKIAKASDKVPKGAGEKVN
LDPTESVNYLMEKFKEKHII

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=215, Percent_Identity=29.7674418604651, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI62420877, Length=229, Percent_Identity=30.1310043668122, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI2367123, Length=209, Percent_Identity=28.2296650717703, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081682, Length=212, Percent_Identity=28.3018867924528, Blast_Score=75, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25141345, Length=267, Percent_Identity=30.3370786516854, Blast_Score=94, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6321646, Length=261, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24651147, Length=198, Percent_Identity=28.2828282828283, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24651145, Length=198, Percent_Identity=28.2828282828283, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27984; Mature: 27984

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVVCIKQVPDTKGGVKFNPDGTLDRASMLAIMNPDDKAGLEAALRIKDETGAKVTVLT
CCEEEEEEECCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEE
MGLPKADAILREAMAMGADDAVLVTDRVLGGADTWATSTTIAGALRNLDYDLIITGRQAI
ECCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC
DGDTAQVGPQIAVHLGLPVISYAEDIKVDGDSVVVKRQYEDRYHVVKAKMPCLITALSEL
CCCCHHCCCEEEEEECCCHHHHHHHEEECCCEEEEEEECCCCEEEEHHCCCHHHHHHHHC
NEPRYMTPGGIFDAFDKEVTVWGRADLKDVDDSDLGLKGSPTKIAKASDKVPKGAGEKVN
CCCCEECCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEC
LDPTESVNYLMEKFKEKHII
CCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIVVCIKQVPDTKGGVKFNPDGTLDRASMLAIMNPDDKAGLEAALRIKDETGAKVTVLT
CCEEEEEEECCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEE
MGLPKADAILREAMAMGADDAVLVTDRVLGGADTWATSTTIAGALRNLDYDLIITGRQAI
ECCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC
DGDTAQVGPQIAVHLGLPVISYAEDIKVDGDSVVVKRQYEDRYHVVKAKMPCLITALSEL
CCCCHHCCCEEEEEECCCHHHHHHHEEECCCEEEEEEECCCCEEEEHHCCCHHHHHHHHC
NEPRYMTPGGIFDAFDKEVTVWGRADLKDVDDSDLGLKGSPTKIAKASDKVPKGAGEKVN
CCCCEECCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEC
LDPTESVNYLMEKFKEKHII
CCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]