| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is glnA [H]
Identifier: 238923109
GI number: 238923109
Start: 644383
End: 646506
Strand: Direct
Name: glnA [H]
Synonym: EUBREC_0701
Alternate gene names: 238923109
Gene position: 644383-646506 (Clockwise)
Preceding gene: 238923108
Following gene: 238923110
Centisome position: 18.68
GC content: 45.67
Gene sequence:
>2124_bases ATGAGCGAACAGGAATATTTCAACGTAGCAGACATCTTTGGAGAGAACGTATTTAACGATGCAGTTATGCAGGAGCGTCT TCCAAAGAAGGTTTACAAGAAGCTCCATGAGGTTATGGACGAAGGAAAGGAGCTTGATCTCGAGACTGCTGATGTTATCG CACACGAGATGAAGGAATGGGCCATTGAGAAGGGTGCAACACACTATACACATTGGTTCCAGCCACTTACAGGCGTTACT GCTGAGAAGCATGATTCATTTATCACTTCTCCAATGCCAAACGGAAAAGTACTTATGAGCTTTTCAGGAAAAGAGTTAAT AAAGGGTGAGCCGGATGCTTCATCTTTCCCATCAGGTGGTCTTCGTGCTACATTTGAGGCAAGAGGATATACAGCCTGGG ATTGTACATCACCTGCATTTGTCAGACAGGATGCAGCAGGCGCAACACTTTGCATTCCAACAGCCTTCTGTTCATACACA GGCGAGGCTCTTGATCAGAAGACACCTCTTCTTAGATCAATGGAAGCAATCAATGATCAGGCACTGAGACTTCTTAGATT ATTCGGAAATACAACATCAAAGAAGGTTACACCTTCTGTCGGACCTGAGCAGGAATACTTCATCGTAGACCGTGAGAAGT ATTTACAGAGAAAGGATCTCATCTTCACAGGACGTACACTTTTCGGAGCTATGCCTCCAAAGGGACAGGAGATGGATGAT CATTATTTCGGAGCTATCCGTGAGAGAATCGCAGCTTACATGAGAGATGTAAACAAGGAGCTCTGGAAGCTTGGTGTTTC AGCCAAGACACAGCACAACGAGGTAGCACCTGCACAGCACGAGCTTGCACCTATCTATGCTGAGTGCAACGTAGCTGTTG ACCACAACCAGCTTATCATGGAGACACTCAAGAAGGTGGCAGGCCGTCACGGACTCCAGTGCTTACTTCATGAGAAGCCA TTCGCAGGAGTTAACGGTTCAGGAAAGCATGACAACTGGTCAATCACAACAGATGATGGTATCAACATGCTTGAGCCTGG CAAGACACCACATGACAATGTACAGTTCTTACTTGTACTCACATGTATGTTAAAGGCAATCGACGAGCATGCAGCACTTC TTCGTGCGGCAGCAGCAGATGTAGGAAACGATCACAGACTTGGAGCCAACGAGGCACCACCTGCAATCCTTTCTATTTAT CTTGGAGACCAGCTCGGAGACGTATTGAACCAGCTTATCGCAACAGGTACAGCTACACACAGCTTAAAGGGTGAGAAGCT TGAGACAGGTGTTAAGACAATTCCTGATTTCATGAAGGATGCTACAGACCGTAACCGTACATCACCATTCGCATTCACAG GAAACAAGTTCGAGTTCCGTATGGTTGGTTCACAGGATTCTGTTGCACAGGCCAACATCGTGCTTAACACAATCGTTGCT GAGGCATTCTCAGACGCTTGTGATATACTTGAGAAGGCAGACAACTTTGACCTCGCTGTACATGATCTCATCAAGGATTA CGCAGTAGAGCACCAGAGAATCGTATTCAACGGAAACGGATACTCAGATGAGTGGGTAGCTGAGGCAGAGAGACGTGGAC TTCCAAACATCAAGTCTATGGTAGATGCAATTCCTGCATACGTTGCTCCTGAGTCAGTTGCAGCATTCGAGAAGTTCGGT GTATTTACAAAGACAGAGCTTGAGAGCCGTGCCGAGATCGAGTATGAGACATATGCAAAGACTATTAATATAGAAGCAAA GGCTATGATTGATATTGCCGGAAAGCAGATTATTCCTGCAGTTATCAAATATATTACATCACTTGCACAGTCAGTTAACT CAGTTAAGAGTGCAGTTGCTGATGCAGATGTATCTGTTCAGTCAGAGCTTCTTACAGAGAGCTCAGCTCTTCTCTCAGAT GCACAGGTTGCACTTGCAAAGCTTAAGGATGAGACAGCAAAGGCCGGTGCTATGGAAGAGGGCAGAGAGCAGGCTGTTTA CTACAGAGATGTTGTAAAGACTGCTATGGATGCTCTTCGTACTCCGGTTGATGAGCTTGAGATGATTGTCGACAAAGAGA TGTGGCCAATGCCATCATACGGCGATTTAATTTTCGAGGTTTAA
Upstream 100 bases:
>100_bases AAACAAGAATATTCGAGTTTATATGTTGTGCAGCTGTTTAAACATTATTTGAAAATAACAATTCACTCAAGGGGATTGAT GAACAGAAAGGATGTAAGAT
Downstream 100 bases:
>100_bases TCCTTGTAGTTTAAGGCCCAAAGCTTACGGAAAGCTGTTTAGAGCGGCATATATGATTTAATTTAACATAATAATAAAAT GGAGACATTTTGCTGAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MSEQEYFNVADIFGENVFNDAVMQERLPKKVYKKLHEVMDEGKELDLETADVIAHEMKEWAIEKGATHYTHWFQPLTGVT AEKHDSFITSPMPNGKVLMSFSGKELIKGEPDASSFPSGGLRATFEARGYTAWDCTSPAFVRQDAAGATLCIPTAFCSYT GEALDQKTPLLRSMEAINDQALRLLRLFGNTTSKKVTPSVGPEQEYFIVDREKYLQRKDLIFTGRTLFGAMPPKGQEMDD HYFGAIRERIAAYMRDVNKELWKLGVSAKTQHNEVAPAQHELAPIYAECNVAVDHNQLIMETLKKVAGRHGLQCLLHEKP FAGVNGSGKHDNWSITTDDGINMLEPGKTPHDNVQFLLVLTCMLKAIDEHAALLRAAAADVGNDHRLGANEAPPAILSIY LGDQLGDVLNQLIATGTATHSLKGEKLETGVKTIPDFMKDATDRNRTSPFAFTGNKFEFRMVGSQDSVAQANIVLNTIVA EAFSDACDILEKADNFDLAVHDLIKDYAVEHQRIVFNGNGYSDEWVAEAERRGLPNIKSMVDAIPAYVAPESVAAFEKFG VFTKTELESRAEIEYETYAKTINIEAKAMIDIAGKQIIPAVIKYITSLAQSVNSVKSAVADADVSVQSELLTESSALLSD AQVALAKLKDETAKAGAMEEGREQAVYYRDVVKTAMDALRTPVDELEMIVDKEMWPMPSYGDLIFEV
Sequences:
>Translated_707_residues MSEQEYFNVADIFGENVFNDAVMQERLPKKVYKKLHEVMDEGKELDLETADVIAHEMKEWAIEKGATHYTHWFQPLTGVT AEKHDSFITSPMPNGKVLMSFSGKELIKGEPDASSFPSGGLRATFEARGYTAWDCTSPAFVRQDAAGATLCIPTAFCSYT GEALDQKTPLLRSMEAINDQALRLLRLFGNTTSKKVTPSVGPEQEYFIVDREKYLQRKDLIFTGRTLFGAMPPKGQEMDD HYFGAIRERIAAYMRDVNKELWKLGVSAKTQHNEVAPAQHELAPIYAECNVAVDHNQLIMETLKKVAGRHGLQCLLHEKP FAGVNGSGKHDNWSITTDDGINMLEPGKTPHDNVQFLLVLTCMLKAIDEHAALLRAAAADVGNDHRLGANEAPPAILSIY LGDQLGDVLNQLIATGTATHSLKGEKLETGVKTIPDFMKDATDRNRTSPFAFTGNKFEFRMVGSQDSVAQANIVLNTIVA EAFSDACDILEKADNFDLAVHDLIKDYAVEHQRIVFNGNGYSDEWVAEAERRGLPNIKSMVDAIPAYVAPESVAAFEKFG VFTKTELESRAEIEYETYAKTINIEAKAMIDIAGKQIIPAVIKYITSLAQSVNSVKSAVADADVSVQSELLTESSALLSD AQVALAKLKDETAKAGAMEEGREQAVYYRDVVKTAMDALRTPVDELEMIVDKEMWPMPSYGDLIFEV >Mature_706_residues SEQEYFNVADIFGENVFNDAVMQERLPKKVYKKLHEVMDEGKELDLETADVIAHEMKEWAIEKGATHYTHWFQPLTGVTA EKHDSFITSPMPNGKVLMSFSGKELIKGEPDASSFPSGGLRATFEARGYTAWDCTSPAFVRQDAAGATLCIPTAFCSYTG EALDQKTPLLRSMEAINDQALRLLRLFGNTTSKKVTPSVGPEQEYFIVDREKYLQRKDLIFTGRTLFGAMPPKGQEMDDH YFGAIRERIAAYMRDVNKELWKLGVSAKTQHNEVAPAQHELAPIYAECNVAVDHNQLIMETLKKVAGRHGLQCLLHEKPF AGVNGSGKHDNWSITTDDGINMLEPGKTPHDNVQFLLVLTCMLKAIDEHAALLRAAAADVGNDHRLGANEAPPAILSIYL GDQLGDVLNQLIATGTATHSLKGEKLETGVKTIPDFMKDATDRNRTSPFAFTGNKFEFRMVGSQDSVAQANIVLNTIVAE AFSDACDILEKADNFDLAVHDLIKDYAVEHQRIVFNGNGYSDEWVAEAERRGLPNIKSMVDAIPAYVAPESVAAFEKFGV FTKTELESRAEIEYETYAKTINIEAKAMIDIAGKQIIPAVIKYITSLAQSVNSVKSAVADADVSVQSELLTESSALLSDA QVALAKLKDETAKAGAMEEGREQAVYYRDVVKTAMDALRTPVDELEMIVDKEMWPMPSYGDLIFEV
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 78114; Mature: 77983
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQEYFNVADIFGENVFNDAVMQERLPKKVYKKLHEVMDEGKELDLETADVIAHEMKEW CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AIEKGATHYTHWFQPLTGVTAEKHDSFITSPMPNGKVLMSFSGKELIKGEPDASSFPSGG HHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCC LRATFEARGYTAWDCTSPAFVRQDAAGATLCIPTAFCSYTGEALDQKTPLLRSMEAINDQ CEEEEECCCEEEECCCCCHHHHHCCCCCEEEHHHHHHHHCHHHHHHCCHHHHHHHHHHHH ALRLLRLFGNTTSKKVTPSVGPEQEYFIVDREKYLQRKDLIFTGRTLFGAMPPKGQEMDD HHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCEEECHHHHCCCCCCCCCCCH HYFGAIRERIAAYMRDVNKELWKLGVSAKTQHNEVAPAQHELAPIYAECNVAVDHNQLIM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECEEEECCHHHHH ETLKKVAGRHGLQCLLHEKPFAGVNGSGKHDNWSITTDDGINMLEPGKTPHDNVQFLLVL HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH TCMLKAIDEHAALLRAAAADVGNDHRLGANEAPPAILSIYLGDQLGDVLNQLIATGTATH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCC SLKGEKLETGVKTIPDFMKDATDRNRTSPFAFTGNKFEFRMVGSQDSVAQANIVLNTIVA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHH EAFSDACDILEKADNFDLAVHDLIKDYAVEHQRIVFNGNGYSDEWVAEAERRGLPNIKSM HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHH VDAIPAYVAPESVAAFEKFGVFTKTELESRAEIEYETYAKTINIEAKAMIDIAGKQIIPA HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHEECCCHHHHHHHHHHHHHHH VIKYITSLAQSVNSVKSAVADADVSVQSELLTESSALLSDAQVALAKLKDETAKAGAMEE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH GREQAVYYRDVVKTAMDALRTPVDELEMIVDKEMWPMPSYGDLIFEV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEC >Mature Secondary Structure SEQEYFNVADIFGENVFNDAVMQERLPKKVYKKLHEVMDEGKELDLETADVIAHEMKEW CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AIEKGATHYTHWFQPLTGVTAEKHDSFITSPMPNGKVLMSFSGKELIKGEPDASSFPSGG HHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCC LRATFEARGYTAWDCTSPAFVRQDAAGATLCIPTAFCSYTGEALDQKTPLLRSMEAINDQ CEEEEECCCEEEECCCCCHHHHHCCCCCEEEHHHHHHHHCHHHHHHCCHHHHHHHHHHHH ALRLLRLFGNTTSKKVTPSVGPEQEYFIVDREKYLQRKDLIFTGRTLFGAMPPKGQEMDD HHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCEEECHHHHCCCCCCCCCCCH HYFGAIRERIAAYMRDVNKELWKLGVSAKTQHNEVAPAQHELAPIYAECNVAVDHNQLIM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECEEEECCHHHHH ETLKKVAGRHGLQCLLHEKPFAGVNGSGKHDNWSITTDDGINMLEPGKTPHDNVQFLLVL HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH TCMLKAIDEHAALLRAAAADVGNDHRLGANEAPPAILSIYLGDQLGDVLNQLIATGTATH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCC SLKGEKLETGVKTIPDFMKDATDRNRTSPFAFTGNKFEFRMVGSQDSVAQANIVLNTIVA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHH EAFSDACDILEKADNFDLAVHDLIKDYAVEHQRIVFNGNGYSDEWVAEAERRGLPNIKSM HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHH VDAIPAYVAPESVAAFEKFGVFTKTELESRAEIEYETYAKTINIEAKAMIDIAGKQIIPA HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHEECCCHHHHHHHHHHHHHHH VIKYITSLAQSVNSVKSAVADADVSVQSELLTESSALLSDAQVALAKLKDETAKAGAMEE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH GREQAVYYRDVVKTAMDALRTPVDELEMIVDKEMWPMPSYGDLIFEV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]