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The map label for this gene is ycjM [C]

Identifier: 238922902

GI number: 238922902

Start: 450673

End: 452160

Strand: Direct

Name: ycjM [C]

Synonym: EUBREC_0490

Alternate gene names: 238922902

Gene position: 450673-452160 (Clockwise)

Preceding gene: 238922901

Following gene: 238922903

Centisome position: 13.06

GC content: 46.1

Gene sequence:

>1488_bases
ATGGCAAAGTCTATGAACAATAAACCTATGCTTAATGCATATCCTGACAGTCTGGGCGGTAAGCTTTCCGATATCGCAGC
GCTGCTCAAAAAGAAGGAAATGCAGGACACATTTTCATCATTTTATATTCTGCCAAGCCTGTATCATTCGGATTTGGACC
GCGGATTTTCGGTCGTGGACTACAATCTGAATGAGGAGCTTGCGACAATAGAGGATTTATCGCAATTGAAGGAGCTGGGG
ATTGACTTAAAGCTTGACTTTATTTTAAATCATGCTTCGGCACAGTCACCACAGTTCAAGGATCTTGTGGAAAAGGGCGA
TGAGTCGGAGTACCGCGACTTTTTCATAGACTGGAACAAATTCTGGGAAGGTCATGGAGTCATGACGGACGAGGGCTACA
TACAGCCTGATGAGTCATGCTTAAAGCAGATGTTTTTCAGAAAGCCGGGGCTTCCGATTCTCATGGTGGAGTTTCCGGAT
GGACGAAGGGTGCCATACTGGAACACATTTTACCAGGAGGTGCATGGCAGAGATTATCTGGGGCAGATGGATTTAAATAT
AAAGTCCGAAAAGGTGTGGGATTTCTATCGAGAAACACTTAAAAAAATAGCATCTTACGGTGCGGCTATTGTGCGGCTTG
ATGCATTTGCCTATGCGCCTAAAGCACCGGGGAAAAAGAATTTCCTGAATGACCCTGAGACCTGGGAATTTCTACAGCAG
ATCCATGAGCTTGCAGCTCCGCTTGGGCTGACTCTGCTGCCTGAAATACATGCGGCATATGAGGAGAAAATATACAAAAC
CCTTGCAGATAAGGGCTATGCCACATATGATTTCTTTTTACCGGGACTGGTAATTGATGCGATTGAGAACAGGAGAGCAG
ATTACCTTGCAAAATGGGCGCGTGAGGTTGTGGAAGATAAAATCTCAACAGTCAATATGCTTGGCTGCCATGACGGCATA
CCTCTTCTGGATTTAAAGGGTCTGCTTCCGGAGGACGATATTCGCTCGCTTATAGATTTGATTGTATCTCGTGGCGGCAT
GGTCAAAAATCTTCATGGACAGAAGAATATATATTATCAGGTCAATGCCACATATTACAGTGCGCTTGGTGAGTCTGACA
GCAAAATGCTTCTGGCCCGTGCTATTCAGATGTTCATGCCGGGCAAGCCGCAGGTATGGTATCTGGATCTCTTTGCAGGC
AAAAATGACCATGAGGCAGTAAGACGCGCAGGAGAATCAGGACACAAGGAAATCAACAGGACAAACCTCAGTGCCTCCGA
TATTGAGGAGGCGCTAAAAAAGGATGTTGTTGCAAAGCAGCTTGAGCTGCTTCGCATGAGAAACACCCATAAGGCGTTTG
AGAAGGGAGCTGTCATCACAGTAGCAGGAGAAGGGCCAAAGCTTTCAATCCGCTATGATAACGGTGAAGCATATGCGCTT
CTAACGGTGGATTTTGAAGCCGGAGCGTATGAGATAGAGCTGAGCTGA

Upstream 100 bases:

>100_bases
GACGAAAACGCCGCAAGCCCTTTCATATGCCGCGTGGTAGAATTGGAGCAGGAAAAGCTTGATTTGCAGGGAAAAAATGC
GCGTATCGTAGTTGGAAAGG

Downstream 100 bases:

>100_bases
TTTGTGTATTACTTATATGAAGCAGTTAGAATATATTTATCATAAAAGATGCGATATCAAAAAGGAACCGGATTTTCCGG
TTCCTTTTTTGCTGCGTAGA

Product: glycosidase

Products: NA

Alternate protein names: Sucrose glucosyltransferase [H]

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MAKSMNNKPMLNAYPDSLGGKLSDIAALLKKKEMQDTFSSFYILPSLYHSDLDRGFSVVDYNLNEELATIEDLSQLKELG
IDLKLDFILNHASAQSPQFKDLVEKGDESEYRDFFIDWNKFWEGHGVMTDEGYIQPDESCLKQMFFRKPGLPILMVEFPD
GRRVPYWNTFYQEVHGRDYLGQMDLNIKSEKVWDFYRETLKKIASYGAAIVRLDAFAYAPKAPGKKNFLNDPETWEFLQQ
IHELAAPLGLTLLPEIHAAYEEKIYKTLADKGYATYDFFLPGLVIDAIENRRADYLAKWAREVVEDKISTVNMLGCHDGI
PLLDLKGLLPEDDIRSLIDLIVSRGGMVKNLHGQKNIYYQVNATYYSALGESDSKMLLARAIQMFMPGKPQVWYLDLFAG
KNDHEAVRRAGESGHKEINRTNLSASDIEEALKKDVVAKQLELLRMRNTHKAFEKGAVITVAGEGPKLSIRYDNGEAYAL
LTVDFEAGAYEIELS

Sequences:

>Translated_495_residues
MAKSMNNKPMLNAYPDSLGGKLSDIAALLKKKEMQDTFSSFYILPSLYHSDLDRGFSVVDYNLNEELATIEDLSQLKELG
IDLKLDFILNHASAQSPQFKDLVEKGDESEYRDFFIDWNKFWEGHGVMTDEGYIQPDESCLKQMFFRKPGLPILMVEFPD
GRRVPYWNTFYQEVHGRDYLGQMDLNIKSEKVWDFYRETLKKIASYGAAIVRLDAFAYAPKAPGKKNFLNDPETWEFLQQ
IHELAAPLGLTLLPEIHAAYEEKIYKTLADKGYATYDFFLPGLVIDAIENRRADYLAKWAREVVEDKISTVNMLGCHDGI
PLLDLKGLLPEDDIRSLIDLIVSRGGMVKNLHGQKNIYYQVNATYYSALGESDSKMLLARAIQMFMPGKPQVWYLDLFAG
KNDHEAVRRAGESGHKEINRTNLSASDIEEALKKDVVAKQLELLRMRNTHKAFEKGAVITVAGEGPKLSIRYDNGEAYAL
LTVDFEAGAYEIELS
>Mature_494_residues
AKSMNNKPMLNAYPDSLGGKLSDIAALLKKKEMQDTFSSFYILPSLYHSDLDRGFSVVDYNLNEELATIEDLSQLKELGI
DLKLDFILNHASAQSPQFKDLVEKGDESEYRDFFIDWNKFWEGHGVMTDEGYIQPDESCLKQMFFRKPGLPILMVEFPDG
RRVPYWNTFYQEVHGRDYLGQMDLNIKSEKVWDFYRETLKKIASYGAAIVRLDAFAYAPKAPGKKNFLNDPETWEFLQQI
HELAAPLGLTLLPEIHAAYEEKIYKTLADKGYATYDFFLPGLVIDAIENRRADYLAKWAREVVEDKISTVNMLGCHDGIP
LLDLKGLLPEDDIRSLIDLIVSRGGMVKNLHGQKNIYYQVNATYYSALGESDSKMLLARAIQMFMPGKPQVWYLDLFAGK
NDHEAVRRAGESGHKEINRTNLSASDIEEALKKDVVAKQLELLRMRNTHKAFEKGAVITVAGEGPKLSIRYDNGEAYALL
TVDFEAGAYEIELS

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sucrose phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI87081873, Length=451, Percent_Identity=28.3813747228381, Blast_Score=147, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR016377
- InterPro:   IPR022527 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =2.4.1.7 [H]

Molecular weight: Translated: 56315; Mature: 56184

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSMNNKPMLNAYPDSLGGKLSDIAALLKKKEMQDTFSSFYILPSLYHSDLDRGFSVVD
CCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
YNLNEELATIEDLSQLKELGIDLKLDFILNHASAQSPQFKDLVEKGDESEYRDFFIDWNK
ECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHEEEEHHH
FWEGHGVMTDEGYIQPDESCLKQMFFRKPGLPILMVEFPDGRRVPYWNTFYQEVHGRDYL
HCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
GQMDLNIKSEKVWDFYRETLKKIASYGAAIVRLDAFAYAPKAPGKKNFLNDPETWEFLQQ
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHH
IHELAAPLGLTLLPEIHAAYEEKIYKTLADKGYATYDFFLPGLVIDAIENRRADYLAKWA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHH
REVVEDKISTVNMLGCHDGIPLLDLKGLLPEDDIRSLIDLIVSRGGMVKNLHGQKNIYYQ
HHHHHHHHHHEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEE
VNATYYSALGESDSKMLLARAIQMFMPGKPQVWYLDLFAGKNDHEAVRRAGESGHKEINR
ECCCEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHH
TNLSASDIEEALKKDVVAKQLELLRMRNTHKAFEKGAVITVAGEGPKLSIRYDNGEAYAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEE
LTVDFEAGAYEIELS
EEEEECCCEEEEEEC
>Mature Secondary Structure 
AKSMNNKPMLNAYPDSLGGKLSDIAALLKKKEMQDTFSSFYILPSLYHSDLDRGFSVVD
CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
YNLNEELATIEDLSQLKELGIDLKLDFILNHASAQSPQFKDLVEKGDESEYRDFFIDWNK
ECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHEEEEHHH
FWEGHGVMTDEGYIQPDESCLKQMFFRKPGLPILMVEFPDGRRVPYWNTFYQEVHGRDYL
HCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
GQMDLNIKSEKVWDFYRETLKKIASYGAAIVRLDAFAYAPKAPGKKNFLNDPETWEFLQQ
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHH
IHELAAPLGLTLLPEIHAAYEEKIYKTLADKGYATYDFFLPGLVIDAIENRRADYLAKWA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHH
REVVEDKISTVNMLGCHDGIPLLDLKGLLPEDDIRSLIDLIVSRGGMVKNLHGQKNIYYQ
HHHHHHHHHHEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEE
VNATYYSALGESDSKMLLARAIQMFMPGKPQVWYLDLFAGKNDHEAVRRAGESGHKEINR
ECCCEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHH
TNLSASDIEEALKKDVVAKQLELLRMRNTHKAFEKGAVITVAGEGPKLSIRYDNGEAYAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEE
LTVDFEAGAYEIELS
EEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368718 [H]