| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yesM [H]
Identifier: 238922894
GI number: 238922894
Start: 439872
End: 441665
Strand: Direct
Name: yesM [H]
Synonym: EUBREC_0482
Alternate gene names: 238922894
Gene position: 439872-441665 (Clockwise)
Preceding gene: 238922893
Following gene: 238922895
Centisome position: 12.75
GC content: 41.64
Gene sequence:
>1794_bases ATGAGAAGAATAAGGTATAAATCAGGCAATATACAATCCATAATAATGCTCTCATTCTCACTGCTGTCGTTTGCAATAAT GCTTGTCACAGTTGTGGTGATGTATATAAAATTTGCCGATGCATCGCAGGACAGTATCATAGAGAGCAATCATAAGGTGA TGGACCAGACAATAGACAGTGTGGAAAGCTATCTGGTCAATATGAGGCAGGTTTCGGATGCGGCGTATTATAATGTAATA AAGGAGAATGATATTTTAAAGCAGTCTGACAGCATACACGATGGCATGAGCCTGCTCTATGAGTCAAACAAGGAATATCT GCGCAGTATTGCCTTGTATAATCAGTATGGAAGCCTTATAGCTGCAGAGCCTGTTGTGTCCCAGAAGGAGGACCCGGATG TGACAAAACAGGACTGGTTCATAGAAGCTATGGAGCGCATGGAAAATATACATTTTTCAACACCTCATGTACAGAATCTG TTTGACGATGGTTCCATGAGATATCATCTGGTCATATCATCAAGCCGTGCCGTGGAGCTGACCTCAGGTTCAGAATCACA GATGGGTGTGATGCTTGTGGACATGGATTATTCGAGTGTATCAAGGATGCTTGAGAGGATAAATACATCGGGAAAAGGAC AGTATTATTATCTGTGTGATGCAAAGGGCAATATTATTTACCATCCGCATCAGATACAGTTTGATGGAGATGTTCCGGAA AACAGCGATGTTGCGGCAAAGTCGCAAAACAGTATATATGATGATTATCTGAATGGAGTGCATCGTAAGATTATGGTAGA TACAATCAGCTACACAGGCTGGAAGCTTGTATGTGTGATGCCATACTCCATCTTTACCAATAAGATGGCGGATGTGAAGC AGTTTGTTTTTGTTATAATGATTATTATGGCTATGATGTTTGTGTGGATAAACAGAGTGATAGCTATACGTATTTCAAAG CCGATAATGAAGCTGGATGATTCTGTGAAAAGGTATGAGAATGGCAATGAAGCAGATATTTATGTAGGTGGTTCCTCAGA GATACGGCATCTGGGATACTCTATACGTAATTCATATAAGCAGAACAATGAGCTCATGAAAAAGATCGTATGGGAGCAGA ACGAGAGACGAAAGAGCGAGCTTGATGTGCTTCAAAGCCAGATTAATCCGCACTTTTTGTATAATACTCTTGACTCCATC ACATGGATGATTGAAGGAGGCAAAAACGAGGAGGCCTCGTTTATGATTACGCAGCTTGCAAAACTTTTCCGTATCAGTCT GTCGAAGGGACATACCATAATACCTGTACGAGATGAGCTTTTGCACGCAAAAAGCTACATGAATATTCAGAAGGTGCGCT ATAAGAACAAATTTGAGGTGAGCTTTGAGGTAGACGAGGAAATAATGGACTACTGTGCGGTGAAGCTGGTGCTTCAGCCG ATTTTGGAAAACGCACTAAATTACGGAATCAGAGAGCTGGACGATTTCGGAGAGATAGTAGTCGGAGGCCAAAAAGTGGG AGAGGATATCATCATAACGGTATCAGACAACGGAATGGGCATTCCGGAGAATGAAATTCCGTTTTTGCTGACAAATACGG ACAGGGTTCACAAGAAGGGCTCGGGAGTAGGGCTTGTCAATGTAAATAACAGGATAAAGATACTGTTTGGAGAGCGCTAT GGCCTGCATATAGAAAGTGAGCTTGATGAGGGAACAGTTGTGACAATCAAAATCCCGGCAATTGTCTATTCAGAGGAAAA CAGACTTCAATTTGAGGAGCATCATATAGTATGA
Upstream 100 bases:
>100_bases TATGTCATAGCCCAGAATGTAGGCTATGCGGATCCGAACTATTTCAGTTATGTTTTTAAGAGAAAGTATGGGGTTTCCCC ATCCAGGTACAGGACAGAGT
Downstream 100 bases:
>100_bases AGCAAGTACAATTCCCTTGCTGCATGGGAGGTGTGAGAGTGACAGTGAAAAATAAATGGACAAATATGAGCAAGAATAAG AGAAACTTCATCATAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MRRIRYKSGNIQSIIMLSFSLLSFAIMLVTVVVMYIKFADASQDSIIESNHKVMDQTIDSVESYLVNMRQVSDAAYYNVI KENDILKQSDSIHDGMSLLYESNKEYLRSIALYNQYGSLIAAEPVVSQKEDPDVTKQDWFIEAMERMENIHFSTPHVQNL FDDGSMRYHLVISSSRAVELTSGSESQMGVMLVDMDYSSVSRMLERINTSGKGQYYYLCDAKGNIIYHPHQIQFDGDVPE NSDVAAKSQNSIYDDYLNGVHRKIMVDTISYTGWKLVCVMPYSIFTNKMADVKQFVFVIMIIMAMMFVWINRVIAIRISK PIMKLDDSVKRYENGNEADIYVGGSSEIRHLGYSIRNSYKQNNELMKKIVWEQNERRKSELDVLQSQINPHFLYNTLDSI TWMIEGGKNEEASFMITQLAKLFRISLSKGHTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQP ILENALNYGIRELDDFGEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKGSGVGLVNVNNRIKILFGERY GLHIESELDEGTVVTIKIPAIVYSEENRLQFEEHHIV
Sequences:
>Translated_597_residues MRRIRYKSGNIQSIIMLSFSLLSFAIMLVTVVVMYIKFADASQDSIIESNHKVMDQTIDSVESYLVNMRQVSDAAYYNVI KENDILKQSDSIHDGMSLLYESNKEYLRSIALYNQYGSLIAAEPVVSQKEDPDVTKQDWFIEAMERMENIHFSTPHVQNL FDDGSMRYHLVISSSRAVELTSGSESQMGVMLVDMDYSSVSRMLERINTSGKGQYYYLCDAKGNIIYHPHQIQFDGDVPE NSDVAAKSQNSIYDDYLNGVHRKIMVDTISYTGWKLVCVMPYSIFTNKMADVKQFVFVIMIIMAMMFVWINRVIAIRISK PIMKLDDSVKRYENGNEADIYVGGSSEIRHLGYSIRNSYKQNNELMKKIVWEQNERRKSELDVLQSQINPHFLYNTLDSI TWMIEGGKNEEASFMITQLAKLFRISLSKGHTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQP ILENALNYGIRELDDFGEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKGSGVGLVNVNNRIKILFGERY GLHIESELDEGTVVTIKIPAIVYSEENRLQFEEHHIV >Mature_597_residues MRRIRYKSGNIQSIIMLSFSLLSFAIMLVTVVVMYIKFADASQDSIIESNHKVMDQTIDSVESYLVNMRQVSDAAYYNVI KENDILKQSDSIHDGMSLLYESNKEYLRSIALYNQYGSLIAAEPVVSQKEDPDVTKQDWFIEAMERMENIHFSTPHVQNL FDDGSMRYHLVISSSRAVELTSGSESQMGVMLVDMDYSSVSRMLERINTSGKGQYYYLCDAKGNIIYHPHQIQFDGDVPE NSDVAAKSQNSIYDDYLNGVHRKIMVDTISYTGWKLVCVMPYSIFTNKMADVKQFVFVIMIIMAMMFVWINRVIAIRISK PIMKLDDSVKRYENGNEADIYVGGSSEIRHLGYSIRNSYKQNNELMKKIVWEQNERRKSELDVLQSQINPHFLYNTLDSI TWMIEGGKNEEASFMITQLAKLFRISLSKGHTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQP ILENALNYGIRELDDFGEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKGSGVGLVNVNNRIKILFGERY GLHIESELDEGTVVTIKIPAIVYSEENRLQFEEHHIV
Specific function: Member of the two-component regulatory system yesM/yesN. Probably activates yesN by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788446, Length=221, Percent_Identity=30.316742081448, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788723, Length=203, Percent_Identity=34.4827586206897, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR010559 - InterPro: IPR005467 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 68488; Mature: 68488
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIRYKSGNIQSIIMLSFSLLSFAIMLVTVVVMYIKFADASQDSIIESNHKVMDQTIDS CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHH VESYLVNMRQVSDAAYYNVIKENDILKQSDSIHDGMSLLYESNKEYLRSIALYNQYGSLI HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCEE AAEPVVSQKEDPDVTKQDWFIEAMERMENIHFSTPHVQNLFDDGSMRYHLVISSSRAVEL EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEECCCEEEE TSGSESQMGVMLVDMDYSSVSRMLERINTSGKGQYYYLCDAKGNIIYHPHQIQFDGDVPE ECCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCEEEEECCCCCC NSDVAAKSQNSIYDDYLNGVHRKIMVDTISYTGWKLVCVMPYSIFTNKMADVKQFVFVIM CCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHH IIMAMMFVWINRVIAIRISKPIMKLDDSVKRYENGNEADIYVGGSSEIRHLGYSIRNSYK HHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH QNNELMKKIVWEQNERRKSELDVLQSQINPHFLYNTLDSITWMIEGGKNEEASFMITQLA HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHH KLFRISLSKGHTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQP HHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHH ILENALNYGIRELDDFGEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKG HHHHHHHCCHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHHHCCC SGVGLVNVNNRIKILFGERYGLHIESELDEGTVVTIKIPAIVYSEENRLQFEEHHIV CCEEEEEECCEEEEEEECCCCEEEECCCCCCEEEEEEEEEEEECCCCCEECCCCCCC >Mature Secondary Structure MRRIRYKSGNIQSIIMLSFSLLSFAIMLVTVVVMYIKFADASQDSIIESNHKVMDQTIDS CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHH VESYLVNMRQVSDAAYYNVIKENDILKQSDSIHDGMSLLYESNKEYLRSIALYNQYGSLI HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCEE AAEPVVSQKEDPDVTKQDWFIEAMERMENIHFSTPHVQNLFDDGSMRYHLVISSSRAVEL EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEECCCEEEE TSGSESQMGVMLVDMDYSSVSRMLERINTSGKGQYYYLCDAKGNIIYHPHQIQFDGDVPE ECCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCEEEEECCCCCC NSDVAAKSQNSIYDDYLNGVHRKIMVDTISYTGWKLVCVMPYSIFTNKMADVKQFVFVIM CCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHH IIMAMMFVWINRVIAIRISKPIMKLDDSVKRYENGNEADIYVGGSSEIRHLGYSIRNSYK HHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH QNNELMKKIVWEQNERRKSELDVLQSQINPHFLYNTLDSITWMIEGGKNEEASFMITQLA HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHH KLFRISLSKGHTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQP HHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHH ILENALNYGIRELDDFGEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKG HHHHHHHCCHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHHHCCC SGVGLVNVNNRIKILFGERYGLHIESELDEGTVVTIKIPAIVYSEENRLQFEEHHIV CCEEEEEECCEEEEEEECCCCEEEECCCCCCEEEEEEEEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]