Click here to switch to the map view.

The map label for this gene is yrkQ [H]

Identifier: 238922779

GI number: 238922779

Start: 332328

End: 333563

Strand: Direct

Name: yrkQ [H]

Synonym: EUBREC_0367

Alternate gene names: 238922779

Gene position: 332328-333563 (Clockwise)

Preceding gene: 238922778

Following gene: 238922780

Centisome position: 9.63

GC content: 36.73

Gene sequence:

>1236_bases
ATGCATGTATACACACAGAATGGGGAAGAGGATACCGTTTTGAGAGATGATTTAAAGAGAGTAAAACAAAAGCTGTCTTT
GACATTTGCAATTGCGATTATAGGCACATGCGTTGTTTTTGGACTATTATACTATCTGGGAATTGATTTGTTGAGCTATT
ATATTGAAGCTGGATCTTGTATGATATACTATAATGAAAAGCCATATATAGACGAGTTTCAACAATATGTATCTGATAAT
GATATAAGTACTACAGATGTCGAGCAATATGATGAATGGATGTCGGAGCATGATGTTGCGTTTTATAGTGTTCAGGAAAT
GGGGAAGGTAATATACAATAAATCAAATGTAGATAAGCTTATATCTCCGGCTAAAAATATGTATGATTACCGATTTACAG
GAAGCTATGAGCTGCCTGTCCAGTTCTCCGATATTGAGGCGGAAGTATTTATATATACAGGATTTACGGAAAAATATTAT
ATTGCTTTTATGATTTTTGATGTGGGATTTTCTCTTATGCTGGGAATTGTATTTGTGTATCTACGCATCAGAAAAATTAT
AGCGGGCTATCAAACAGAGCTTGAAGCATCACAGGAACAGGAGAAAAAAGCGCGACAGGAAAAGGATGAACTGATGCGTA
ATATGGCTCATGACCTGCGTACGCCGTTGACTGGTGTTATGACATATGTTGATGTAATGAAACTGGAGAACGAAGCATAT
GCCGAGAATATGAAAAATCTTAATTTTATAAGTGAAAAGGTATTGGATATCAGGACTCAGGTAGACAATCTGCTGGATTT
TTCAATTGCCGGTTCACAAAGACCTGTTGAATTGGATGCATCAATGGATGTTGAGTATATATTTGGAGATTACCTCTCAG
ATGTGTGTGCTCAGCTTATGAAAAGCAATTATGAGGTTGATGCAGAAGGAATAAGCTTTAAGCAGGTAAAGGTTGCTGTT
AATATGGCATTTTTGACAAGAATATTTTCCAATCTGACGGATAATATATATAAATATGCGGACAATAAGAAGCCTGTTGT
TATGAAAACAGCTTTTACGAAAAAAACATTTAGCGTTGAAATTGGCAATGGCGTATGTGACAATAAAACGCTTCTTAAAA
GTGCCGGGATAGGGCTTAAGAGCGTGGATGCGATGATGCAGCGCATGAATGGAAGCATGAGCTTTAAAAGGGAACATGGG
AAGTTTTGGGTTAAACTGGAGTTTCCGATTGTGTAG

Upstream 100 bases:

>100_bases
TACGAGATGGTATGGGATGAGGCTTTTACATATAATGCAAAGAATACTGTTATGGTACACATTAAAAATCTTAGGAATAA
GCTTATAAAAGCATGTGGCG

Downstream 100 bases:

>100_bases
TGAATATTTTTTCATGAAAACCTCCATACTAAATAGAAAAGAAGTATGGAGGTTTTTATGAGCAGAAATATTGAAAATCA
TGATTCGGTGCTCTTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MHVYTQNGEEDTVLRDDLKRVKQKLSLTFAIAIIGTCVVFGLLYYLGIDLLSYYIEAGSCMIYYNEKPYIDEFQQYVSDN
DISTTDVEQYDEWMSEHDVAFYSVQEMGKVIYNKSNVDKLISPAKNMYDYRFTGSYELPVQFSDIEAEVFIYTGFTEKYY
IAFMIFDVGFSLMLGIVFVYLRIRKIIAGYQTELEASQEQEKKARQEKDELMRNMAHDLRTPLTGVMTYVDVMKLENEAY
AENMKNLNFISEKVLDIRTQVDNLLDFSIAGSQRPVELDASMDVEYIFGDYLSDVCAQLMKSNYEVDAEGISFKQVKVAV
NMAFLTRIFSNLTDNIYKYADNKKPVVMKTAFTKKTFSVEIGNGVCDNKTLLKSAGIGLKSVDAMMQRMNGSMSFKREHG
KFWVKLEFPIV

Sequences:

>Translated_411_residues
MHVYTQNGEEDTVLRDDLKRVKQKLSLTFAIAIIGTCVVFGLLYYLGIDLLSYYIEAGSCMIYYNEKPYIDEFQQYVSDN
DISTTDVEQYDEWMSEHDVAFYSVQEMGKVIYNKSNVDKLISPAKNMYDYRFTGSYELPVQFSDIEAEVFIYTGFTEKYY
IAFMIFDVGFSLMLGIVFVYLRIRKIIAGYQTELEASQEQEKKARQEKDELMRNMAHDLRTPLTGVMTYVDVMKLENEAY
AENMKNLNFISEKVLDIRTQVDNLLDFSIAGSQRPVELDASMDVEYIFGDYLSDVCAQLMKSNYEVDAEGISFKQVKVAV
NMAFLTRIFSNLTDNIYKYADNKKPVVMKTAFTKKTFSVEIGNGVCDNKTLLKSAGIGLKSVDAMMQRMNGSMSFKREHG
KFWVKLEFPIV
>Mature_411_residues
MHVYTQNGEEDTVLRDDLKRVKQKLSLTFAIAIIGTCVVFGLLYYLGIDLLSYYIEAGSCMIYYNEKPYIDEFQQYVSDN
DISTTDVEQYDEWMSEHDVAFYSVQEMGKVIYNKSNVDKLISPAKNMYDYRFTGSYELPVQFSDIEAEVFIYTGFTEKYY
IAFMIFDVGFSLMLGIVFVYLRIRKIIAGYQTELEASQEQEKKARQEKDELMRNMAHDLRTPLTGVMTYVDVMKLENEAY
AENMKNLNFISEKVLDIRTQVDNLLDFSIAGSQRPVELDASMDVEYIFGDYLSDVCAQLMKSNYEVDAEGISFKQVKVAV
NMAFLTRIFSNLTDNIYKYADNKKPVVMKTAFTKKTFSVEIGNGVCDNKTLLKSAGIGLKSVDAMMQRMNGSMSFKREHG
KFWVKLEFPIV

Specific function: Member of the two-component regulatory system yrkQ/yrkP. Probably activates yrkP by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR003661
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47372; Mature: 47372

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVYTQNGEEDTVLRDDLKRVKQKLSLTFAIAIIGTCVVFGLLYYLGIDLLSYYIEAGSC
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
MIYYNEKPYIDEFQQYVSDNDISTTDVEQYDEWMSEHDVAFYSVQEMGKVIYNKSNVDKL
EEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
ISPAKNMYDYRFTGSYELPVQFSDIEAEVFIYTGFTEKYYIAFMIFDVGFSLMLGIVFVY
HHHHHHCCEEEECCCEECCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LRIRKIIAGYQTELEASQEQEKKARQEKDELMRNMAHDLRTPLTGVMTYVDVMKLENEAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
AENMKNLNFISEKVLDIRTQVDNLLDFSIAGSQRPVELDASMDVEYIFGDYLSDVCAQLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
KSNYEVDAEGISFKQVKVAVNMAFLTRIFSNLTDNIYKYADNKKPVVMKTAFTKKTFSVE
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE
IGNGVCDNKTLLKSAGIGLKSVDAMMQRMNGSMSFKREHGKFWVKLEFPIV
ECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCC
>Mature Secondary Structure
MHVYTQNGEEDTVLRDDLKRVKQKLSLTFAIAIIGTCVVFGLLYYLGIDLLSYYIEAGSC
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
MIYYNEKPYIDEFQQYVSDNDISTTDVEQYDEWMSEHDVAFYSVQEMGKVIYNKSNVDKL
EEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
ISPAKNMYDYRFTGSYELPVQFSDIEAEVFIYTGFTEKYYIAFMIFDVGFSLMLGIVFVY
HHHHHHCCEEEECCCEECCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LRIRKIIAGYQTELEASQEQEKKARQEKDELMRNMAHDLRTPLTGVMTYVDVMKLENEAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
AENMKNLNFISEKVLDIRTQVDNLLDFSIAGSQRPVELDASMDVEYIFGDYLSDVCAQLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
KSNYEVDAEGISFKQVKVAVNMAFLTRIFSNLTDNIYKYADNKKPVVMKTAFTKKTFSVE
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE
IGNGVCDNKTLLKSAGIGLKSVDAMMQRMNGSMSFKREHGKFWVKLEFPIV
ECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]