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The map label for this gene is yrkP [H]

Identifier: 238922778

GI number: 238922778

Start: 331682

End: 332377

Strand: Direct

Name: yrkP [H]

Synonym: EUBREC_0366

Alternate gene names: 238922778

Gene position: 331682-332377 (Clockwise)

Preceding gene: 238922777

Following gene: 238922779

Centisome position: 9.61

GC content: 36.35

Gene sequence:

>696_bases
ATGGACAAAATTCTTGTTGTTGAGGATGATAAAACAGTATACAGTGGAATAAAAAAGCTTCTCGAATTGCAGCATTATAG
TGTGGTAATTGCGCAAAACGGTATGGAAGCCTTAGAAAAAATAGATGAATCGTTCAGCCTTGTAATAATGGATATAATGA
TGCCTCAGTTAGATGGCATTGAAACATGCAGGAGAATGCGTGAAAGACACAGTGTTCCGATATTGTTTTTGTCAGCAAAA
TCGGAAGAGCTGGATAAGCTGGAAGGGCTTGAAGTAGGTGGTGACGATTACATGACTAAGCCATTTTCGAACATGGAGCT
TATTTCAAAGGTTAAAGCTCTTATCAGACGATATCTGGTATATGACAGTGGAAGTGCAAATCGCACAAACAAGGATGAAA
CTATAGAGACAGATGGACTTAAACTGTTTACGAATCGAAACAAGGTTGAGTTTAATGATAATGAGATAAAATTAACAGGA
AAAGAATATGAGATATTAAAATTGCTGATGAAAAATCCTGACCGGATATATACGATTGAGATGATATACGAGATGGTATG
GGATGAGGCTTTTACATATAATGCAAAGAATACTGTTATGGTACACATTAAAAATCTTAGGAATAAGCTTATAAAAGCAT
GTGGCGATGCATGTATACACACAGAATGGGGAAGAGGATACCGTTTTGAGAGATGA

Upstream 100 bases:

>100_bases
TGCTAATAAGGGTTTGCGCACATTAAGGAATAATTAGGAGCGGTTATGTGGTATAATCTTTTTGATGTAATAAACATGTA
TAATATGATAGGAGCATATA

Downstream 100 bases:

>100_bases
TTTAAAGAGAGTAAAACAAAAGCTGTCTTTGACATTTGCAATTGCGATTATAGGCACATGCGTTGTTTTTGGACTATTAT
ACTATCTGGGAATTGATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDKILVVEDDKTVYSGIKKLLELQHYSVVIAQNGMEALEKIDESFSLVIMDIMMPQLDGIETCRRMRERHSVPILFLSAK
SEELDKLEGLEVGGDDYMTKPFSNMELISKVKALIRRYLVYDSGSANRTNKDETIETDGLKLFTNRNKVEFNDNEIKLTG
KEYEILKLLMKNPDRIYTIEMIYEMVWDEAFTYNAKNTVMVHIKNLRNKLIKACGDACIHTEWGRGYRFER

Sequences:

>Translated_231_residues
MDKILVVEDDKTVYSGIKKLLELQHYSVVIAQNGMEALEKIDESFSLVIMDIMMPQLDGIETCRRMRERHSVPILFLSAK
SEELDKLEGLEVGGDDYMTKPFSNMELISKVKALIRRYLVYDSGSANRTNKDETIETDGLKLFTNRNKVEFNDNEIKLTG
KEYEILKLLMKNPDRIYTIEMIYEMVWDEAFTYNAKNTVMVHIKNLRNKLIKACGDACIHTEWGRGYRFER
>Mature_231_residues
MDKILVVEDDKTVYSGIKKLLELQHYSVVIAQNGMEALEKIDESFSLVIMDIMMPQLDGIETCRRMRERHSVPILFLSAK
SEELDKLEGLEVGGDDYMTKPFSNMELISKVKALIRRYLVYDSGSANRTNKDETIETDGLKLFTNRNKVEFNDNEIKLTG
KEYEILKLLMKNPDRIYTIEMIYEMVWDEAFTYNAKNTVMVHIKNLRNKLIKACGDACIHTEWGRGYRFER

Specific function: Member of the two-component regulatory system yrkQ/yrkP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.9649122807018, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1790860, Length=230, Percent_Identity=32.6086956521739, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=32.034632034632, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=30, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=30.3030303030303, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1790552, Length=231, Percent_Identity=35.0649350649351, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=29.8245614035088, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=32.3144104803493, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=31.1111111111111, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786911, Length=233, Percent_Identity=28.3261802575107, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1786784, Length=230, Percent_Identity=30.4347826086957, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=32.4675324675325, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=30.8695652173913, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790437, Length=107, Percent_Identity=35.5140186915888, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693140, Length=240, Percent_Identity=27.9166666666667, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=33.9449541284404, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26911; Mature: 26911

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKILVVEDDKTVYSGIKKLLELQHYSVVIAQNGMEALEKIDESFSLVIMDIMMPQLDGI
CCCEEEEECCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCH
ETCRRMRERHSVPILFLSAKSEELDKLEGLEVGGDDYMTKPFSNMELISKVKALIRRYLV
HHHHHHHHHCCCCEEEEECCCHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
YDSGSANRTNKDETIETDGLKLFTNRNKVEFNDNEIKLTGKEYEILKLLMKNPDRIYTIE
CCCCCCCCCCCCCEEECCCEEEEECCCEEEECCCEEEEECCHHHHHHHHHCCCCCEEHHH
MIYEMVWDEAFTYNAKNTVMVHIKNLRNKLIKACGDACIHTEWGRGYRFER
HHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHCCHHEECCCCCCCCCCC
>Mature Secondary Structure
MDKILVVEDDKTVYSGIKKLLELQHYSVVIAQNGMEALEKIDESFSLVIMDIMMPQLDGI
CCCEEEEECCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCH
ETCRRMRERHSVPILFLSAKSEELDKLEGLEVGGDDYMTKPFSNMELISKVKALIRRYLV
HHHHHHHHHCCCCEEEEECCCHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
YDSGSANRTNKDETIETDGLKLFTNRNKVEFNDNEIKLTGKEYEILKLLMKNPDRIYTIE
CCCCCCCCCCCCCEEECCCEEEEECCCEEEECCCEEEEECCHHHHHHHHHCCCCCEEHHH
MIYEMVWDEAFTYNAKNTVMVHIKNLRNKLIKACGDACIHTEWGRGYRFER
HHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHCCHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]