| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922572
Identifier: 238922572
GI number: 238922572
Start: 139315
End: 141684
Strand: Direct
Name: 238922572
Synonym: EUBREC_0146
Alternate gene names: NA
Gene position: 139315-141684 (Clockwise)
Preceding gene: 238922571
Following gene: 238922573
Centisome position: 4.04
GC content: 43.97
Gene sequence:
>2370_bases ATGAGCAGGAAAAAGATAAAAAATCCTCTGATAAAGCGTATACCAAAGGAAATTATCGGTGACTGGAAGAAATATCTTGT TGTATTTCTTTTCCTCGTGTTGACAATTGGCTTTGTATCCGGAATGTATGTGGCAAACGACAGTATGCTCACCTCTGCGG ATGAGGGGGTAAGTAAATACAAGCAGGAGGATGGACATTTTGAGCTTAAGGATAAGGCTGACAGCGAGCTTGTTACGGCT ATCGAGTCAGGCGAGGTAAAAACAGCTCCAGACGAAAAAGACAGCGATAGCAGCAAAACTCCTGTCAAGCTTTACGAGAA TTTCTATCGCAATGAGACTGAGGACTACGACGCAGACGGCAAAAAGGACGGAACCATCCGTGTATACACAAAGACCGGGA ATATCAACCTTGCATGTCTCATCGAGGGCTCATTTCCACAAAATGAGAACGAAATCGCTGTGGACAGAATGCATGCAGAC AACGTGGGCATGAAGGTCGGTGACACAATAAAGGTCAGCGGAAAAGAATTCAAGGTATCGGGCCTTATCGCATATGTCAA TTACTCCACACTGCATGAAAAGAAGACCGATATGATGTTTGATGCGATAAAGTTTGATGTGGCAATGGTGACAAAGGAGG GCTTTGAGCGCCTGCACAAGAGCATTCACTATACATATGCATGGAAATACGAGGATGAGCCGGCTGACGACATAGAGCAG AAGGAAAAATCAGATGACTTTCTGGAGGCGATGGTGTCACAGGTTATGGCAGCAGGCAATGAAGTGGAGGACTACACACC GCGCTACTCAAATCCGGCAATAAATTTTGCCACGGACGATATGGGCTCAGACAAGGCCATGGGAGGAGTGCTTTTAGACA TTCTTATTGTGATAATCGCATTCATTTTTGCAGTGACCATAAGCAATACGATAGCAAATGAATCATCAGCGATAGGCACG CTTCGTGCGTCGGGCTACACAAAGGGCGAGCTTATTAGGCATTACCTTTCAATGCCTGTCATTGTAACATTTCTGGCAGC AGTAGTAGGAAATATACTGGGCTATACGGTGTTCAAGGATGTGGTTGTGGGCATGTATTACAACAGCTACAGCCTGCCGA CATACCACACAATCTGGAATCCGGGCGCATTCATAAAAACAACGCTTGCTCCGGTGATTATAATGCTGGTTGTAAATCTT ATCGTGATAATCCGCATGATGCAGCACACACCGCTTCAGTTTCTGCGTCATGACCTTAAGAAAACAAAGCGTAAAAAAGC AATGCGGCTTCCGCACTGGAGCTTCATGAGCCGTTTCAGACTGCGAATCATGTTCCAGAATGTGGCAAACTATCTGATAC TTTTTGTGGGAATATTTTTCATCATGGTAATGCTCGCGATGGCAGTCGGCATGCCGGATACACTTGATTATTACAAGAAA AATACCGACAGTATGATGTTTGCAAAATACCAGTACGTACTCAAATCCTATGTCGATGCAGACGGAAACGTGCTTGAAAC CGATAACAGTGATGCAGAGAAATTTGACATGACATCGCTCTTAAGGAGGACAGATGAGTTTGACGAGGAGGTGTCTGTCT ACGGAGTGGAAACAGACAGTGCATACGTAAAGCTTAAGGACATGGATTCGCTTAAGGATAATGAGGTGTACATATCAGAC TCATTTGCAGATAAATATGGTATAAAACCGGGCGATACAATAAAGTTTGATGCACAGTACGAGAAAAAAACATACAAATT CAAGGTGAAGGGAACCTACGATAAATCCCAGAGCATCGCGGTGTTTATGCCGATAGAGCATTTCGCGGATACCTTTGATT TTGCAGATGGCAGATTCAGCGGATTTTTGTCGGATACAAAGATAAAGGATATCGATGAGAGCAATATCGCAACAACAATC ACGATACGCGACATCACCAAAATGGCAGACCAGCTCGACCACTCCATGGGCTCATACATGCAGTACTTCCAGGTGCTTTG CATACTGCTCTCAGCCGTCATGATATATCTGCTCACGAAGCTCATCATCGAGAAAAATGAGACAGCCATATCGATGACAA AGATTTTAGGCTACGACAACAGAGAAATTGCAAGTCTTTATCTGGCCTCAACATCCATCGTGGTGGTTATATCAGATATC ATTAGCGTAGTGCTTGGTGCAAAAGTAATGGACATTGTATGGCGCATAATGCTTCAGACCTTCAGCGGCTGGTTTTCATT CCATATGACACATGTCGGCTATGTAAAGATGTTTGCGTTTGTGCTCATCGGTTACCTGATAGTGACAGTATTTGATTTCA GTAGAATAAAGAGAATCCCGATGGACATGGCACTAAAGAATGTGGAATAG
Upstream 100 bases:
>100_bases ACCACGTGATAAAGCTTAGGGACGGAGCCGTGCGCCACAACGATATCAATACAAATAAGGTTTCGGCCGAAGAGCTTGAG TGGTAAGGAGGATTTGACCT
Downstream 100 bases:
>100_bases GTAGTATAACTGTTTATGATTGAACATTAACCCTATTTGCGCGACAAATTAATCAAAGGCAAAATGTAGATAAATTTTTT ATTTACTGATAAACTATTGT
Product: putative permease
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Permease; Efflux ABC Transporter Permease Protein; Efflux ABC Transporter Permease
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MSRKKIKNPLIKRIPKEIIGDWKKYLVVFLFLVLTIGFVSGMYVANDSMLTSADEGVSKYKQEDGHFELKDKADSELVTA IESGEVKTAPDEKDSDSSKTPVKLYENFYRNETEDYDADGKKDGTIRVYTKTGNINLACLIEGSFPQNENEIAVDRMHAD NVGMKVGDTIKVSGKEFKVSGLIAYVNYSTLHEKKTDMMFDAIKFDVAMVTKEGFERLHKSIHYTYAWKYEDEPADDIEQ KEKSDDFLEAMVSQVMAAGNEVEDYTPRYSNPAINFATDDMGSDKAMGGVLLDILIVIIAFIFAVTISNTIANESSAIGT LRASGYTKGELIRHYLSMPVIVTFLAAVVGNILGYTVFKDVVVGMYYNSYSLPTYHTIWNPGAFIKTTLAPVIIMLVVNL IVIIRMMQHTPLQFLRHDLKKTKRKKAMRLPHWSFMSRFRLRIMFQNVANYLILFVGIFFIMVMLAMAVGMPDTLDYYKK NTDSMMFAKYQYVLKSYVDADGNVLETDNSDAEKFDMTSLLRRTDEFDEEVSVYGVETDSAYVKLKDMDSLKDNEVYISD SFADKYGIKPGDTIKFDAQYEKKTYKFKVKGTYDKSQSIAVFMPIEHFADTFDFADGRFSGFLSDTKIKDIDESNIATTI TIRDITKMADQLDHSMGSYMQYFQVLCILLSAVMIYLLTKLIIEKNETAISMTKILGYDNREIASLYLASTSIVVVISDI ISVVLGAKVMDIVWRIMLQTFSGWFSFHMTHVGYVKMFAFVLIGYLIVTVFDFSRIKRIPMDMALKNVE
Sequences:
>Translated_789_residues MSRKKIKNPLIKRIPKEIIGDWKKYLVVFLFLVLTIGFVSGMYVANDSMLTSADEGVSKYKQEDGHFELKDKADSELVTA IESGEVKTAPDEKDSDSSKTPVKLYENFYRNETEDYDADGKKDGTIRVYTKTGNINLACLIEGSFPQNENEIAVDRMHAD NVGMKVGDTIKVSGKEFKVSGLIAYVNYSTLHEKKTDMMFDAIKFDVAMVTKEGFERLHKSIHYTYAWKYEDEPADDIEQ KEKSDDFLEAMVSQVMAAGNEVEDYTPRYSNPAINFATDDMGSDKAMGGVLLDILIVIIAFIFAVTISNTIANESSAIGT LRASGYTKGELIRHYLSMPVIVTFLAAVVGNILGYTVFKDVVVGMYYNSYSLPTYHTIWNPGAFIKTTLAPVIIMLVVNL IVIIRMMQHTPLQFLRHDLKKTKRKKAMRLPHWSFMSRFRLRIMFQNVANYLILFVGIFFIMVMLAMAVGMPDTLDYYKK NTDSMMFAKYQYVLKSYVDADGNVLETDNSDAEKFDMTSLLRRTDEFDEEVSVYGVETDSAYVKLKDMDSLKDNEVYISD SFADKYGIKPGDTIKFDAQYEKKTYKFKVKGTYDKSQSIAVFMPIEHFADTFDFADGRFSGFLSDTKIKDIDESNIATTI TIRDITKMADQLDHSMGSYMQYFQVLCILLSAVMIYLLTKLIIEKNETAISMTKILGYDNREIASLYLASTSIVVVISDI ISVVLGAKVMDIVWRIMLQTFSGWFSFHMTHVGYVKMFAFVLIGYLIVTVFDFSRIKRIPMDMALKNVE >Mature_788_residues SRKKIKNPLIKRIPKEIIGDWKKYLVVFLFLVLTIGFVSGMYVANDSMLTSADEGVSKYKQEDGHFELKDKADSELVTAI ESGEVKTAPDEKDSDSSKTPVKLYENFYRNETEDYDADGKKDGTIRVYTKTGNINLACLIEGSFPQNENEIAVDRMHADN VGMKVGDTIKVSGKEFKVSGLIAYVNYSTLHEKKTDMMFDAIKFDVAMVTKEGFERLHKSIHYTYAWKYEDEPADDIEQK EKSDDFLEAMVSQVMAAGNEVEDYTPRYSNPAINFATDDMGSDKAMGGVLLDILIVIIAFIFAVTISNTIANESSAIGTL RASGYTKGELIRHYLSMPVIVTFLAAVVGNILGYTVFKDVVVGMYYNSYSLPTYHTIWNPGAFIKTTLAPVIIMLVVNLI VIIRMMQHTPLQFLRHDLKKTKRKKAMRLPHWSFMSRFRLRIMFQNVANYLILFVGIFFIMVMLAMAVGMPDTLDYYKKN TDSMMFAKYQYVLKSYVDADGNVLETDNSDAEKFDMTSLLRRTDEFDEEVSVYGVETDSAYVKLKDMDSLKDNEVYISDS FADKYGIKPGDTIKFDAQYEKKTYKFKVKGTYDKSQSIAVFMPIEHFADTFDFADGRFSGFLSDTKIKDIDESNIATTIT IRDITKMADQLDHSMGSYMQYFQVLCILLSAVMIYLLTKLIIEKNETAISMTKILGYDNREIASLYLASTSIVVVISDII SVVLGAKVMDIVWRIMLQTFSGWFSFHMTHVGYVKMFAFVLIGYLIVTVFDFSRIKRIPMDMALKNVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89705; Mature: 89574
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKKIKNPLIKRIPKEIIGDWKKYLVVFLFLVLTIGFVSGMYVANDSMLTSADEGVSKY CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHHH KQEDGHFELKDKADSELVTAIESGEVKTAPDEKDSDSSKTPVKLYENFYRNETEDYDADG HCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC KKDGTIRVYTKTGNINLACLIEGSFPQNENEIAVDRMHADNVGMKVGDTIKVSGKEFKVS CCCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCEEEECCCEEEEE GLIAYVNYSTLHEKKTDMMFDAIKFDVAMVTKEGFERLHKSIHYTYAWKYEDEPADDIEQ EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHH KEKSDDFLEAMVSQVMAAGNEVEDYTPRYSNPAINFATDDMGSDKAMGGVLLDILIVIIA HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH FIFAVTISNTIANESSAIGTLRASGYTKGELIRHYLSMPVIVTFLAAVVGNILGYTVFKD HHHHHHHHHHHCCCCHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVGMYYNSYSLPTYHTIWNPGAFIKTTLAPVIIMLVVNLIVIIRMMQHTPLQFLRHDLK HHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTKRKKAMRLPHWSFMSRFRLRIMFQNVANYLILFVGIFFIMVMLAMAVGMPDTLDYYKK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC NTDSMMFAKYQYVLKSYVDADGNVLETDNSDAEKFDMTSLLRRTDEFDEEVSVYGVETDS CCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC AYVKLKDMDSLKDNEVYISDSFADKYGIKPGDTIKFDAQYEKKTYKFKVKGTYDKSQSIA CEEEEECCCCCCCCEEEEECCCHHHCCCCCCCEEEECCEECCCEEEEEEEECCCCCCCEE VFMPIEHFADTFDFADGRFSGFLSDTKIKDIDESNIATTITIRDITKMADQLDHSMGSYM EEEEHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH QYFQVLCILLSAVMIYLLTKLIIEKNETAISMTKILGYDNREIASLYLASTSIVVVISDI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ISVVLGAKVMDIVWRIMLQTFSGWFSFHMTHVGYVKMFAFVLIGYLIVTVFDFSRIKRIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MDMALKNVE HHHHHCCCC >Mature Secondary Structure SRKKIKNPLIKRIPKEIIGDWKKYLVVFLFLVLTIGFVSGMYVANDSMLTSADEGVSKY CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHHH KQEDGHFELKDKADSELVTAIESGEVKTAPDEKDSDSSKTPVKLYENFYRNETEDYDADG HCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC KKDGTIRVYTKTGNINLACLIEGSFPQNENEIAVDRMHADNVGMKVGDTIKVSGKEFKVS CCCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCEEEECCCEEEEE GLIAYVNYSTLHEKKTDMMFDAIKFDVAMVTKEGFERLHKSIHYTYAWKYEDEPADDIEQ EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHH KEKSDDFLEAMVSQVMAAGNEVEDYTPRYSNPAINFATDDMGSDKAMGGVLLDILIVIIA HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH FIFAVTISNTIANESSAIGTLRASGYTKGELIRHYLSMPVIVTFLAAVVGNILGYTVFKD HHHHHHHHHHHCCCCHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVGMYYNSYSLPTYHTIWNPGAFIKTTLAPVIIMLVVNLIVIIRMMQHTPLQFLRHDLK HHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTKRKKAMRLPHWSFMSRFRLRIMFQNVANYLILFVGIFFIMVMLAMAVGMPDTLDYYKK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC NTDSMMFAKYQYVLKSYVDADGNVLETDNSDAEKFDMTSLLRRTDEFDEEVSVYGVETDS CCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC AYVKLKDMDSLKDNEVYISDSFADKYGIKPGDTIKFDAQYEKKTYKFKVKGTYDKSQSIA CEEEEECCCCCCCCEEEEECCCHHHCCCCCCCEEEECCEECCCEEEEEEEECCCCCCCEE VFMPIEHFADTFDFADGRFSGFLSDTKIKDIDESNIATTITIRDITKMADQLDHSMGSYM EEEEHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH QYFQVLCILLSAVMIYLLTKLIIEKNETAISMTKILGYDNREIASLYLASTSIVVVISDI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ISVVLGAKVMDIVWRIMLQTFSGWFSFHMTHVGYVKMFAFVLIGYLIVTVFDFSRIKRIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MDMALKNVE HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA