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The map label for this gene is yurM [H]

Identifier: 238922562

GI number: 238922562

Start: 127792

End: 128682

Strand: Direct

Name: yurM [H]

Synonym: EUBREC_0136

Alternate gene names: 238922562

Gene position: 127792-128682 (Clockwise)

Preceding gene: 238922561

Following gene: 238922563

Centisome position: 3.7

GC content: 35.35

Gene sequence:

>891_bases
ATGAGAGAGAAAAAAAATCCGAATTCTGCGGAACGGTTGTATAAATTTTTTATCTATTTAGTTTTAATAATGCTTGCAGT
CAGTATTATTATTCCGGTGGCATGGGTGTTTATGGCATCCATTAAGCAAAATAAAGAGTTTTATGGAAATCCGTGGACTT
TGCCGGAGGGTTTTTATTTTCAGAACTTTATTGATGCCTGGAATACAGCAAAAATGGGAGATTACATGTTAAACTCCGTA
TTGGTTACAGCTTTGGCACTTGTAATTCTTTTAATTGTTGCGCTGCCGGCAGCTTACTGTTTGTCACGTTTTAAATTTAA
AGGAAGTAAATTTTTAAATGCGGCTTTTATGGGTGGTCTTTTTATTAACGTGAATTACATTGTTGTTCCAATTTTTTTGA
TGCTGCGAGATGGGGACAATTGGCTGAAATCAGTAATTGGGAAAAGTTTTCTGTTAAATAATCTGGTTATACTTGCAATC
GTATATGCTGCAACAGCACTTCCGTTTACAATTTATCTGTTGTCGGGGTATTTTTCAACATTGGCACATGATTATGAAGA
GGCGGCATATATTGATGGAGCAGGTTATAGTACAACGATGTGGAAAATTATTTTTCCAATGGCAAAACCATCTATTATTA
CGATAATCTTGTTTAATTTTCTTTCTTTTTGGAATGAATATATCATTTCCATGACACTGATGAGTTCGGCAAAGGGACCG
AAAACGTTACCGGTAGGATTATTAAATCTGATGCAGGCACAGCAGTCAGCAGCACAGTATGGAATTATGTATGCAGGACT
TGTAATAGTAATGCTTCCTACATTAATTTTATATATATGTGTTCAGAATAAACTGACACAGGGAATGACTGTTGGTGGTT
TAAAGGGTTGA

Upstream 100 bases:

>100_bases
TGGCAATAGGTGTTGTAATATTTATTTTCTCGTTTGCATTGTCTGCACTTGTAAATAAAGTTACAGAGCGTGAACCACTG
GAGTTTTAAGGAGAGAAAAT

Downstream 100 bases:

>100_bases
TGAGAAGGGAGATTAAAATGGAATTTTGGAAAAAGCACACAAAATGCAGAATAATTTTAATGGCAGCTCTTTTTATTGCC
GGAATAAGCCTGTCTGTTTT

Product: permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MREKKNPNSAERLYKFFIYLVLIMLAVSIIIPVAWVFMASIKQNKEFYGNPWTLPEGFYFQNFIDAWNTAKMGDYMLNSV
LVTALALVILLIVALPAAYCLSRFKFKGSKFLNAAFMGGLFINVNYIVVPIFLMLRDGDNWLKSVIGKSFLLNNLVILAI
VYAATALPFTIYLLSGYFSTLAHDYEEAAYIDGAGYSTTMWKIIFPMAKPSIITIILFNFLSFWNEYIISMTLMSSAKGP
KTLPVGLLNLMQAQQSAAQYGIMYAGLVIVMLPTLILYICVQNKLTQGMTVGGLKG

Sequences:

>Translated_296_residues
MREKKNPNSAERLYKFFIYLVLIMLAVSIIIPVAWVFMASIKQNKEFYGNPWTLPEGFYFQNFIDAWNTAKMGDYMLNSV
LVTALALVILLIVALPAAYCLSRFKFKGSKFLNAAFMGGLFINVNYIVVPIFLMLRDGDNWLKSVIGKSFLLNNLVILAI
VYAATALPFTIYLLSGYFSTLAHDYEEAAYIDGAGYSTTMWKIIFPMAKPSIITIILFNFLSFWNEYIISMTLMSSAKGP
KTLPVGLLNLMQAQQSAAQYGIMYAGLVIVMLPTLILYICVQNKLTQGMTVGGLKG
>Mature_296_residues
MREKKNPNSAERLYKFFIYLVLIMLAVSIIIPVAWVFMASIKQNKEFYGNPWTLPEGFYFQNFIDAWNTAKMGDYMLNSV
LVTALALVILLIVALPAAYCLSRFKFKGSKFLNAAFMGGLFINVNYIVVPIFLMLRDGDNWLKSVIGKSFLLNNLVILAI
VYAATALPFTIYLLSGYFSTLAHDYEEAAYIDGAGYSTTMWKIIFPMAKPSIITIILFNFLSFWNEYIISMTLMSSAKGP
KTLPVGLLNLMQAQQSAAQYGIMYAGLVIVMLPTLILYICVQNKLTQGMTVGGLKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=283, Percent_Identity=28.9752650176678, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33170; Mature: 33170

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00055 RIBOSOMAL_S12 ; PS00761 SPASE_I_3 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKKNPNSAERLYKFFIYLVLIMLAVSIIIPVAWVFMASIKQNKEFYGNPWTLPEGFYF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHH
QNFIDAWNTAKMGDYMLNSVLVTALALVILLIVALPAAYCLSRFKFKGSKFLNAAFMGGL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
FINVNYIVVPIFLMLRDGDNWLKSVIGKSFLLNNLVILAIVYAATALPFTIYLLSGYFST
HEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHDYEEAAYIDGAGYSTTMWKIIFPMAKPSIITIILFNFLSFWNEYIISMTLMSSAKGP
HHHHHHHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KTLPVGLLNLMQAQQSAAQYGIMYAGLVIVMLPTLILYICVQNKLTQGMTVGGLKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MREKKNPNSAERLYKFFIYLVLIMLAVSIIIPVAWVFMASIKQNKEFYGNPWTLPEGFYF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHH
QNFIDAWNTAKMGDYMLNSVLVTALALVILLIVALPAAYCLSRFKFKGSKFLNAAFMGGL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
FINVNYIVVPIFLMLRDGDNWLKSVIGKSFLLNNLVILAIVYAATALPFTIYLLSGYFST
HEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHDYEEAAYIDGAGYSTTMWKIIFPMAKPSIITIILFNFLSFWNEYIISMTLMSSAKGP
HHHHHHHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KTLPVGLLNLMQAQQSAAQYGIMYAGLVIVMLPTLILYICVQNKLTQGMTVGGLKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]