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The map label for this gene is yurN [H]

Identifier: 238922561

GI number: 238922561

Start: 126896

End: 127780

Strand: Direct

Name: yurN [H]

Synonym: EUBREC_0135

Alternate gene names: 238922561

Gene position: 126896-127780 (Clockwise)

Preceding gene: 238922560

Following gene: 238922562

Centisome position: 3.68

GC content: 35.93

Gene sequence:

>885_bases
ATGAAAAAAGCCAGAGGACGAAGCGGTTTTTTGGCGGTATGCATAGCACCAGCAGTAATTTTATTTTTTGTGTTTATGAT
ATTGCCTACCTTAAATGTATTCCGGATGTCGTTATTTGAAAAAGGTGCATATTCACCGAATGAAACATTTGTTGGCCTGA
AAAATTTTAAAACATTAATATCGGATACTAATTTTATAAGGTCCATGCAAAACATGATTTTACTTATTGTTGTTGTTACA
ATAGTTACCTTTGCATTTGCACTTGTTTTTGCAGGCATTCTGTCAAGAGAACAAATCAGGGGACAGAATTTTTTCCGTAT
TATTTTTTATATTCCCAATATTTTATCGGTTGTAGTAATTGCAGGTATTTTTTCTGCAATTTATAAGCCGGAGAACGGAA
TGCTAAATAGTATTATCGGACTGTTTCATAAAATGGAGAACCCGATTTTGTGGAAAGGTGAATCGCTTGTGATCGTCAGT
CTTATTATTGCAATGATCTGGCAGGCGATTGGTTACTATATGGTCATGTACATGGCATCTATGGCGAGTGTGCCGAAAAG
CCTGTATGAAAGTGCCGGATTAGATGGTGCAGGCAGGCTCGTTCAGTTTTTTCAGATTACAATTCCGTTGATCTGGACTA
ATATTCGTACAACATTAACATTTTTTATTATTTCTACTATTAATATGGCATTTCTTTTTGTAAAAGCTATGACTTCAGGT
GGCCCAAACGGAGCTTCTGAAGTGTCACTAAGCTATATGTATGGACAGAAGGATGCCGGATTATATGGATACAGTATGGC
AATAGGTGTTGTAATATTTATTTTCTCGTTTGCATTGTCTGCACTTGTAAATAAAGTTACAGAGCGTGAACCACTGGAGT
TTTAA

Upstream 100 bases:

>100_bases
AGTTTGCCTTAATGCTATAGTGGTAAAAATGAGTCGGCGGACAGAATTTTTGTCCGCCGAATTTTAAATAGTACGGTTTG
TTTGAAAGGAACGTGAAAGT

Downstream 100 bases:

>100_bases
GGAGAGAAAATATGAGAGAGAAAAAAAATCCGAATTCTGCGGAACGGTTGTATAAATTTTTTATCTATTTAGTTTTAATA
ATGCTTGCAGTCAGTATTAT

Product: putative permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKKARGRSGFLAVCIAPAVILFFVFMILPTLNVFRMSLFEKGAYSPNETFVGLKNFKTLISDTNFIRSMQNMILLIVVVT
IVTFAFALVFAGILSREQIRGQNFFRIIFYIPNILSVVVIAGIFSAIYKPENGMLNSIIGLFHKMENPILWKGESLVIVS
LIIAMIWQAIGYYMVMYMASMASVPKSLYESAGLDGAGRLVQFFQITIPLIWTNIRTTLTFFIISTINMAFLFVKAMTSG
GPNGASEVSLSYMYGQKDAGLYGYSMAIGVVIFIFSFALSALVNKVTEREPLEF

Sequences:

>Translated_294_residues
MKKARGRSGFLAVCIAPAVILFFVFMILPTLNVFRMSLFEKGAYSPNETFVGLKNFKTLISDTNFIRSMQNMILLIVVVT
IVTFAFALVFAGILSREQIRGQNFFRIIFYIPNILSVVVIAGIFSAIYKPENGMLNSIIGLFHKMENPILWKGESLVIVS
LIIAMIWQAIGYYMVMYMASMASVPKSLYESAGLDGAGRLVQFFQITIPLIWTNIRTTLTFFIISTINMAFLFVKAMTSG
GPNGASEVSLSYMYGQKDAGLYGYSMAIGVVIFIFSFALSALVNKVTEREPLEF
>Mature_294_residues
MKKARGRSGFLAVCIAPAVILFFVFMILPTLNVFRMSLFEKGAYSPNETFVGLKNFKTLISDTNFIRSMQNMILLIVVVT
IVTFAFALVFAGILSREQIRGQNFFRIIFYIPNILSVVVIAGIFSAIYKPENGMLNSIIGLFHKMENPILWKGESLVIVS
LIIAMIWQAIGYYMVMYMASMASVPKSLYESAGLDGAGRLVQFFQITIPLIWTNIRTTLTFFIISTINMAFLFVKAMTSG
GPNGASEVSLSYMYGQKDAGLYGYSMAIGVVIFIFSFALSALVNKVTEREPLEF

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=276, Percent_Identity=28.2608695652174, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790465, Length=276, Percent_Identity=28.2608695652174, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787570, Length=253, Percent_Identity=28.4584980237154, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32776; Mature: 32776

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKARGRSGFLAVCIAPAVILFFVFMILPTLNVFRMSLFEKGAYSPNETFVGLKNFKTLI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
SDTNFIRSMQNMILLIVVVTIVTFAFALVFAGILSREQIRGQNFFRIIFYIPNILSVVVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGIFSAIYKPENGMLNSIIGLFHKMENPILWKGESLVIVSLIIAMIWQAIGYYMVMYMAS
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MASVPKSLYESAGLDGAGRLVQFFQITIPLIWTNIRTTLTFFIISTINMAFLFVKAMTSG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPNGASEVSLSYMYGQKDAGLYGYSMAIGVVIFIFSFALSALVNKVTEREPLEF
CCCCHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKARGRSGFLAVCIAPAVILFFVFMILPTLNVFRMSLFEKGAYSPNETFVGLKNFKTLI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
SDTNFIRSMQNMILLIVVVTIVTFAFALVFAGILSREQIRGQNFFRIIFYIPNILSVVVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGIFSAIYKPENGMLNSIIGLFHKMENPILWKGESLVIVSLIIAMIWQAIGYYMVMYMAS
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MASVPKSLYESAGLDGAGRLVQFFQITIPLIWTNIRTTLTFFIISTINMAFLFVKAMTSG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPNGASEVSLSYMYGQKDAGLYGYSMAIGVVIFIFSFALSALVNKVTEREPLEF
CCCCHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]