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The map label for this gene is ykwD [H]

Identifier: 238922269

GI number: 238922269

Start: 464991

End: 465929

Strand: Reverse

Name: ykwD [H]

Synonym: EUBELI_20504

Alternate gene names: 238922269

Gene position: 465929-464991 (Counterclockwise)

Preceding gene: 238922271

Following gene: 238922267

Centisome position: 74.34

GC content: 40.26

Gene sequence:

>939_bases
ATGAGAATGAAAAGAAGAGACTTTGCTGCCACATTAATGGCAGTACTTATGGCAGGAAGTATATTTGCAGGTTGCGGAAG
TGCTGATAAAAATGTAAATCATAATGTTGAAACAACGCAGAATATACAGAATGCAAAGGATGTGCAGTTTACTACGCAGG
CTGTTGCAGATAATGAAACCAAAGCAACAAATGCAAAAGATGAAAAAGAAACAGAAAGCACCATTCAGGAGTTGGAAACT
AAAACTCAGGAAGTGGATACAGAAGTAATTACTGCAGACAGTGAGGTATCCGGGACTCAGAATGATAGCGATATACAGGA
GACTGGAGATCAGGAAAATATAGCTGCAGAAGATAATGAGTGGAATAATGGAAATACAGAAGATTCTAATTATGAGGGAA
AAAACACTCAGGAATCTGTAGAAAATAATAATCAGAATAATAACGGGAATAATGCGCCTGGAGATCAGCAGGCACCGGCA
TCAGGCGGAAATGTTAATATTAAAGATGATAACAGCCTGCTTGCAAGTGCAAAGGTTAATACAGTTACATATAGTGCATA
TGCCAGCGAAGTGTTAAGACTTGTCAATATTGAGAGAGACAAAGTTGGAGCTGCACATCTTGTTTTAGACGGAGCGTTAT
GTGATGCTGCAAATATGCGTGCGATTGAGATGGATTATTCGGGAAATTTCAGTCACACAAGACCGGATGGAAGAGGCTGC
TTTACTGTTTTTTCATTTTGCACAATCAGTTTTTATACATGTGGTGAAAATATCGCGGCATGGTATCCGACTCCGGCAGC
AGTTGTTGATGGCTGGATGAACTCAACGGGGCATAAAGCTAATATATTAAATACAGCATTTACAAAGATGGGACTTGGAT
ACAGTACAGGAGGCGGTGGAGAGTACCGCCATTACTGGGCACAGGAATTTGCTGGATAA

Upstream 100 bases:

>100_bases
TGGTATAAAATGGTAATAAAGATATATAGAAAAATTCTTACACCTATGTTATTATTTTAAATAGCAGTTTTGATGCAAAT
GAGTATTAATCAGGGGAAAC

Downstream 100 bases:

>100_bases
AAAGAATATAAAAAATAGAAAGAGCCATATCGGATAATCCGGTATGGCTCTTTCAGAGAAGGAAATTATATGAGAAAAAT
TAAGATATAGCTTTCTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRMKRRDFAATLMAVLMAGSIFAGCGSADKNVNHNVETTQNIQNAKDVQFTTQAVADNETKATNAKDEKETESTIQELET
KTQEVDTEVITADSEVSGTQNDSDIQETGDQENIAAEDNEWNNGNTEDSNYEGKNTQESVENNNQNNNGNNAPGDQQAPA
SGGNVNIKDDNSLLASAKVNTVTYSAYASEVLRLVNIERDKVGAAHLVLDGALCDAANMRAIEMDYSGNFSHTRPDGRGC
FTVFSFCTISFYTCGENIAAWYPTPAAVVDGWMNSTGHKANILNTAFTKMGLGYSTGGGGEYRHYWAQEFAG

Sequences:

>Translated_312_residues
MRMKRRDFAATLMAVLMAGSIFAGCGSADKNVNHNVETTQNIQNAKDVQFTTQAVADNETKATNAKDEKETESTIQELET
KTQEVDTEVITADSEVSGTQNDSDIQETGDQENIAAEDNEWNNGNTEDSNYEGKNTQESVENNNQNNNGNNAPGDQQAPA
SGGNVNIKDDNSLLASAKVNTVTYSAYASEVLRLVNIERDKVGAAHLVLDGALCDAANMRAIEMDYSGNFSHTRPDGRGC
FTVFSFCTISFYTCGENIAAWYPTPAAVVDGWMNSTGHKANILNTAFTKMGLGYSTGGGGEYRHYWAQEFAG
>Mature_312_residues
MRMKRRDFAATLMAVLMAGSIFAGCGSADKNVNHNVETTQNIQNAKDVQFTTQAVADNETKATNAKDEKETESTIQELET
KTQEVDTEVITADSEVSGTQNDSDIQETGDQENIAAEDNEWNNGNTEDSNYEGKNTQESVENNNQNNNGNNAPGDQQAPA
SGGNVNIKDDNSLLASAKVNTVTYSAYASEVLRLVNIERDKVGAAHLVLDGALCDAANMRAIEMDYSGNFSHTRPDGRGC
FTVFSFCTISFYTCGENIAAWYPTPAAVVDGWMNSTGHKANILNTAFTKMGLGYSTGGGGEYRHYWAQEFAG

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 33757; Mature: 33757

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKRRDFAATLMAVLMAGSIFAGCGSADKNVNHNVETTQNIQNAKDVQFTTQAVADNET
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCC
KATNAKDEKETESTIQELETKTQEVDTEVITADSEVSGTQNDSDIQETGDQENIAAEDNE
CCCCCCCHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCC
WNNGNTEDSNYEGKNTQESVENNNQNNNGNNAPGDQQAPASGGNVNIKDDNSLLASAKVN
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEC
TVTYSAYASEVLRLVNIERDKVGAAHLVLDGALCDAANMRAIEMDYSGNFSHTRPDGRGC
EEEHHHHHHHHHHHHHCCHHHCCEEEEEEECHHHCCCCCEEEEECCCCCCCCCCCCCCHH
FTVFSFCTISFYTCGENIAAWYPTPAAVVDGWMNSTGHKANILNTAFTKMGLGYSTGGGG
HHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
EYRHYWAQEFAG
CHHHHHHHHHCC
>Mature Secondary Structure
MRMKRRDFAATLMAVLMAGSIFAGCGSADKNVNHNVETTQNIQNAKDVQFTTQAVADNET
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCC
KATNAKDEKETESTIQELETKTQEVDTEVITADSEVSGTQNDSDIQETGDQENIAAEDNE
CCCCCCCHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCC
WNNGNTEDSNYEGKNTQESVENNNQNNNGNNAPGDQQAPASGGNVNIKDDNSLLASAKVN
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEC
TVTYSAYASEVLRLVNIERDKVGAAHLVLDGALCDAANMRAIEMDYSGNFSHTRPDGRGC
EEEHHHHHHHHHHHHHCCHHHCCEEEEEEECHHHCCCCCEEEEECCCCCCCCCCCCCCHH
FTVFSFCTISFYTCGENIAAWYPTPAAVVDGWMNSTGHKANILNTAFTKMGLGYSTGGGG
HHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
EYRHYWAQEFAG
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]