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The map label for this gene is yiaM [C]

Identifier: 238921993

GI number: 238921993

Start: 188198

End: 188704

Strand: Reverse

Name: yiaM [C]

Synonym: EUBELI_20228

Alternate gene names: 238921993

Gene position: 188704-188198 (Counterclockwise)

Preceding gene: 238921994

Following gene: 238921992

Centisome position: 30.11

GC content: 36.09

Gene sequence:

>507_bases
ATGCATATAAGCCCATGGTTTGCAGGAAGAAAGGAGAAAAGCATGAAGTATTTGAATAAAGTAGTTGAAATAATATTAGA
GGTGCTTGTAGCCGGTATGGTACTTGGATGCTGCTGGCAGGTAATTACAAGATTTGTGTTACATAATCCAAGCAAATATA
CAGAGGAATTATTAAGATATATGCTCATATGGCTGACAATGATGGGCGTTCCTTACGCATATGGACAAAACAGTCATCTG
GCTATCAATCTTATAGTTAAGAAGTTCAAGCCAAAGAATGAAACACTTGCTCAGATTGCAATAGATGTGCTTATTATGAT
TTTAAGTGTTTCAGTAATGATTATTGGTGGAATTATGGTTACTGCTAATGCAGCAGGACAGCTCTCACCAGCTATGCAGA
TTCCTATGCAGGTCTATTATGTATGTGTTCCGGTATGTGGAGTTCTCATGGTTATTTACGGAGTGTTTAAGATTGTAGAT
CATTTTAAGAAATTAAGACAGAATTAA

Upstream 100 bases:

>100_bases
CACCATTTATTGAGGCAGTACAGCCAATACATGCCAACTTCTATAACAAGGGCGAAGCATATAAGAAGCTATATGATGAC
ATTCAGAAATATGCAGATTA

Downstream 100 bases:

>100_bases
GATTGAATAATGCATATATATGCAGAAGGAGGCAATATGGAAATACAGGCAGCAATTGTATTGATAATAGTATTCTTTTT
ATTACTGGCATTTAGTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; C4-Dicarboxylate Transport System; TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter Small Transmembrane Protein; TRAP Dicarboxylate Transporter DctQ Subunit; Aspartate Kinase Monofunctional Class; Trap-Family Transport System Permease Protein; 30S Ribosomal; TRAP-Type C4-Dicarboxylate Transport System; Membrane Transporter; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transport System Small Permease; TRAP Dicarboxylate Transporter Subunit DctQ; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; TRAP Dicarboxylate Transporter; Inner Membrane Protein; C4-Dicarboxylate Permease Small Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MHISPWFAGRKEKSMKYLNKVVEIILEVLVAGMVLGCCWQVITRFVLHNPSKYTEELLRYMLIWLTMMGVPYAYGQNSHL
AINLIVKKFKPKNETLAQIAIDVLIMILSVSVMIIGGIMVTANAAGQLSPAMQIPMQVYYVCVPVCGVLMVIYGVFKIVD
HFKKLRQN

Sequences:

>Translated_168_residues
MHISPWFAGRKEKSMKYLNKVVEIILEVLVAGMVLGCCWQVITRFVLHNPSKYTEELLRYMLIWLTMMGVPYAYGQNSHL
AINLIVKKFKPKNETLAQIAIDVLIMILSVSVMIIGGIMVTANAAGQLSPAMQIPMQVYYVCVPVCGVLMVIYGVFKIVD
HFKKLRQN
>Mature_168_residues
MHISPWFAGRKEKSMKYLNKVVEIILEVLVAGMVLGCCWQVITRFVLHNPSKYTEELLRYMLIWLTMMGVPYAYGQNSHL
AINLIVKKFKPKNETLAQIAIDVLIMILSVSVMIIGGIMVTANAAGQLSPAMQIPMQVYYVCVPVCGVLMVIYGVFKIVD
HFKKLRQN

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19023; Mature: 19023

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISPWFAGRKEKSMKYLNKVVEIILEVLVAGMVLGCCWQVITRFVLHNPSKYTEELLRY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MLIWLTMMGVPYAYGQNSHLAINLIVKKFKPKNETLAQIAIDVLIMILSVSVMIIGGIMV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TANAAGQLSPAMQIPMQVYYVCVPVCGVLMVIYGVFKIVDHFKKLRQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHISPWFAGRKEKSMKYLNKVVEIILEVLVAGMVLGCCWQVITRFVLHNPSKYTEELLRY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MLIWLTMMGVPYAYGQNSHLAINLIVKKFKPKNETLAQIAIDVLIMILSVSVMIIGGIMV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TANAAGQLSPAMQIPMQVYYVCVPVCGVLMVIYGVFKIVDHFKKLRQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA