Definition Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence.
Accession NC_012780
Length 626,744

Click here to switch to the map view.

The map label for this gene is 238921958

Identifier: 238921958

GI number: 238921958

Start: 157207

End: 157464

Strand: Reverse

Name: 238921958

Synonym: EUBELI_20193

Alternate gene names: NA

Gene position: 157464-157207 (Counterclockwise)

Preceding gene: 238921959

Following gene: 238921957

Centisome position: 25.12

GC content: 37.6

Gene sequence:

>258_bases
ATGACACAGAACAGCTACAGGTATTTTAAGAACGACCAGTGTAAATATTACCCATGTCATAAGATAGAAGAAGGGCAGGA
TTTCAACTGCCTTTTTTGTTATTGTCCCATGAACTGCTATGAGGATTGTCCGGGAACACCGCGGTATATAACAAGAGAAA
GCGGGAAACGGATAAAGGATTGTACGAATTGTACATTTCCGCATATTCCGGAAAATTATGATTACATAGTAAAGTTTTTA
TCTGAAAAGATGAGATAG

Upstream 100 bases:

>100_bases
ATATATGTCTTAACTATGGACAGGCATATGCGCCGGATGAGATTAGGGACAAATCTGTATGTGTTAATAAGGATATTGGT
GAGGTTATAAGGAGACTGTT

Downstream 100 bases:

>100_bases
GAGAAGAAACTCACAATGAAAAAGGCTATTCTTATAGTAAGTTTTGGAACTACATATACAGAGACAAGAATAAAGAATAT
TACAGCTATTAAGAATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine-Rich Small Domain-Containing Protein; Cysteine-Rich Small Domain

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MTQNSYRYFKNDQCKYYPCHKIEEGQDFNCLFCYCPMNCYEDCPGTPRYITRESGKRIKDCTNCTFPHIPENYDYIVKFL
SEKMR

Sequences:

>Translated_85_residues
MTQNSYRYFKNDQCKYYPCHKIEEGQDFNCLFCYCPMNCYEDCPGTPRYITRESGKRIKDCTNCTFPHIPENYDYIVKFL
SEKMR
>Mature_84_residues
TQNSYRYFKNDQCKYYPCHKIEEGQDFNCLFCYCPMNCYEDCPGTPRYITRESGKRIKDCTNCTFPHIPENYDYIVKFLS
EKMR

Specific function: Unknown

COG id: COG2158

COG function: function code R; Uncharacterized protein containing a Zn-finger-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10328; Mature: 10197

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
14.1 %Cys+Met (Translated Protein)
10.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
13.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNSYRYFKNDQCKYYPCHKIEEGQDFNCLFCYCPMNCYEDCPGTPRYITRESGKRIKD
CCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCEEECCCCCCCCC
CTNCTFPHIPENYDYIVKFLSEKMR
CCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TQNSYRYFKNDQCKYYPCHKIEEGQDFNCLFCYCPMNCYEDCPGTPRYITRESGKRIKD
CCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCEEECCCCCCCCC
CTNCTFPHIPENYDYIVKFLSEKMR
CCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA