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The map label for this gene is oxaA

Identifier: 238921764

GI number: 238921764

Start: 3809290

End: 3810915

Strand: Reverse

Name: oxaA

Synonym: NT01EI_3933

Alternate gene names: 238921764

Gene position: 3810915-3809290 (Counterclockwise)

Preceding gene: 238921765

Following gene: 238921763

Centisome position: 99.96

GC content: 56.7

Gene sequence:

>1626_bases
ATGGATTCGCAACGTAATCTATTCCTCGTCGCTCTGCTGTTCGTGTCCTTCTTAATCTGGCAGGCCTGGCAGACGGACCA
TAATCCGCAGCCGGTCGCTCAGACAGCAGGACAGAGCATAAGTGACACCGCTAGCCAGGCAGTACCGGAAAGCGGTCAGG
GTAAGCTTATTACGGTTAAGACCGACGTACTGGCTTTGACCATCAACACCCGCGGTGGTGACATCGAGCAGGCCGATCTG
CTGGCCTACCCGGCTACTCTGGGCTCAGATACCCCATTCCAACTGCTGGAAACCACGCCGCAGTTTGTCTACCAGGCTCA
GAGCGGCCTGACCGGCAAGAGCGGTCCGGATAACCCGGCGAACGGCGCCCGCCCGCTGTACAGCGCTAACCAAACCAGCT
ATGAAATGCTGCCGGGCCAGGATGAGCTGCGAATCCCGCTGACCTATACTGCTGCAAACGGCGTTATCTACACCAAAACC
TTCGTTCTTAAGCGCAATGACTACGCCATCGCCGTTGACTATAAGGTGAAAAACGACAGCCACGACGCACTGGATCTGAC
CCTGTTCGGGCAGCTCAAGCAATCCGTCGATCTGCCAAAGCACCGCGATACCGGCAGCAACAACTTTGCACTGCACACCT
TCCGCGGCGCGGCTTACTCCTCCAGCGATGACAAGTATCAGAAGTACAGCTTCAGCGATATCGAAGACAAGAACCTGAAC
GTGCAGACGAAAGGCGGCTGGGTCGCCATGCTGCAACAGTACTTCGCCACCGCCTGGATCCCGCACGACAGCGGCGTAAA
CACCTTCTACAGCGCCAATCTGGGTAATGGCCAGGCGGCTATCGGCTATAAGGCGCCGTCCGTTAGCGTCGCGCCAAACA
CAGAGAAGGTGCTCAGCACCACGCTGTGGGTCGGTCCGGAGCTGCAAAGCGATATGGCTGCCGTTGCGCCACACCTTGAT
TTGACCGTGGACTATGGCTGGCTGTGGTTTATCTCTCAGCCGCTGTTCAAGCTGCTGCAGCTGATCCACAGCTTCGTCGG
GAACTGGGGCTTCGCCATCATTATCATCACCTTTATCGTTCGTGGCATCATGTACCCGCTGACCAAGGCGCAGTACACCT
CGATGGCCAAGATGCGTATGCTGCAGCCCAAGCTGCAGGCCATGCGCGAACGTATCGGCGATGACAAACAGCGCATGAGC
CAGGAGATGATGGCGCTGTACAAGACCGAGAAGGTTAACCCGTTGGGCGGCTGCTTCCCGCTGCTGATCCAGATGCCTAT
CTTCCTGGCCCTGTACTACATGCTGATGGGCTCCGTCGAGCTGCGTCAGGCGCCGTTTGCCCTGTGGATCCATGACCTGG
CCGCGCCGGACCCGTTCTACATTCTGCCTATCCTGATGGGCGTAACCATGTTCTTCATCCAGAAGATGTCGCCGACAACC
GTCACCGATCCGATGCAGCAGAAGATCATGACGTTTATGCCGGTTATCTTTACCGTCTTCTTCCTGTGGTTCCCTTCAGG
CCTGGTGCTGTACTATATCGTCAGCAACCTGGTTACCATCATCCAGCAGCAGCTGATTTACCGCGGTCTGGAAAAACGCG
GTCTGCACAGCAGGGATAAAAAATAA

Upstream 100 bases:

>100_bases
GGCAGTTGGTTGACGCTGAAACGCGTATTAAAATGCCACCCTTTGAACCCGGGTGGCGATGATCCCGTGCCGCCAAAGAC
CAATAACAGAGAACATTAAG

Downstream 100 bases:

>100_bases
CCCACGCTGATGCAGCGAGGTACCAGGGGGGCGGTCTGATGACCGCCCCTTTTTTCTTGCCGCCCGCCGCGCGGGCCAGC
ACTCAACGCCAAAAGAGAGA

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MDSQRNLFLVALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESGQGKLITVKTDVLALTINTRGGDIEQADL
LAYPATLGSDTPFQLLETTPQFVYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKT
FVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNLN
VQTKGGWVAMLQQYFATAWIPHDSGVNTFYSANLGNGQAAIGYKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVAPHLD
LTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMS
QEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAPDPFYILPILMGVTMFFIQKMSPTT
VTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDKK

Sequences:

>Translated_541_residues
MDSQRNLFLVALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESGQGKLITVKTDVLALTINTRGGDIEQADL
LAYPATLGSDTPFQLLETTPQFVYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKT
FVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNLN
VQTKGGWVAMLQQYFATAWIPHDSGVNTFYSANLGNGQAAIGYKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVAPHLD
LTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMS
QEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAPDPFYILPILMGVTMFFIQKMSPTT
VTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDKK
>Mature_541_residues
MDSQRNLFLVALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESGQGKLITVKTDVLALTINTRGGDIEQADL
LAYPATLGSDTPFQLLETTPQFVYQAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKT
FVLKRNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNLN
VQTKGGWVAMLQQYFATAWIPHDSGVNTFYSANLGNGQAAIGYKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVAPHLD
LTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMS
QEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAPDPFYILPILMGVTMFFIQKMSPTT
VTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=546, Percent_Identity=77.4725274725275, Blast_Score=868, Evalue=0.0,
Organism=Drosophila melanogaster, GI24662345, Length=194, Percent_Identity=26.2886597938144, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356443, Length=194, Percent_Identity=26.2886597938144, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_EDWI9 (C5BF61)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002935279.1
- GeneID:   7961499
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3933
- OMA:   TYRGAAF
- ProtClustDB:   PRK01318
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 60645; Mature: 60645

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2098de04)-; HASH(0x20d5f368)-; HASH(0x205fc9fc)-; HASH(0x20e174dc)-; HASH(0x20d383c0)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQRNLFLVALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESGQGKLITVK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCEEEEE
TDVLALTINTRGGDIEQADLLAYPATLGSDTPFQLLETTPQFVYQAQSGLTGKSGPDNPA
EEEEEEEEECCCCCCCCHHHEEECCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCC
NGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKTFVLKRNDYAIAVDYKVKNDS
CCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEECCCC
HDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNLN
CCEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCE
VQTKGGWVAMLQQYFATAWIPHDSGVNTFYSANLGNGQAAIGYKAPSVSVAPNTEKVLST
EEECCCHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCEEEEECCCCCEECCCHHHHHHH
TLWVGPELQSDMAAVAPHLDLTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIV
HHCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMSQEMMALYKTEKVNPLGGCFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
LLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAPDPFYILPILMGVTMFFIQKMSPTT
HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
VTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
K
H
>Mature Secondary Structure
MDSQRNLFLVALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESGQGKLITVK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCEEEEE
TDVLALTINTRGGDIEQADLLAYPATLGSDTPFQLLETTPQFVYQAQSGLTGKSGPDNPA
EEEEEEEEECCCCCCCCHHHEEECCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCC
NGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKTFVLKRNDYAIAVDYKVKNDS
CCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEECCCC
HDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDDKYQKYSFSDIEDKNLN
CCEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCE
VQTKGGWVAMLQQYFATAWIPHDSGVNTFYSANLGNGQAAIGYKAPSVSVAPNTEKVLST
EEECCCHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCEEEEECCCCCEECCCHHHHHHH
TLWVGPELQSDMAAVAPHLDLTVDYGWLWFISQPLFKLLQLIHSFVGNWGFAIIIITFIV
HHCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMSQEMMALYKTEKVNPLGGCFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
LLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAPDPFYILPILMGVTMFFIQKMSPTT
HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
VTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
K
H

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA