| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yieH [H]
Identifier: 238921754
GI number: 238921754
Start: 3800850
End: 3801521
Strand: Reverse
Name: yieH [H]
Synonym: NT01EI_3923
Alternate gene names: 238921754
Gene position: 3801521-3800850 (Counterclockwise)
Preceding gene: 238921755
Following gene: 238921747
Centisome position: 99.72
GC content: 57.89
Gene sequence:
>672_bases ATGAGCAGTATCCGCTGTATTCTCTTCGACTGTGATGGAACGCTGGTAGACAGCGAAATGATCTGCAGTAAAGCCTATGT AAGTATGTTCTCCCAGTATGGGATAACGCTATCGCTGGAAGATATCTACCGCGAATTCAAAGGAGTGCGGCTGTACGAAA TTATTGACGTGATACAGCGGCGCCATCCGTTCACGGCCGATCGCGCCGAGATGGAGTCTCACTACCGCGCCGAAGTGGCG CGTCTGTTCGACAGCGAGCTCCAGCCAATTCCCCACGCCAACGAGCTGCTAAACCAAGTCTGCGTCCCCATGTGTACCGC CTCCAATGGACCTGTCAGCAAGATGCAGAGTTCCCTTGGCGCCACCGGAATGCTGCCCTTCTTCGGCGATCGTCTGTACA GTGGCTACGATATTCAGCGCTGGAAACCCCTGCCGGATTTATTGCTCCACGCAGCCCGGGATATGGGGGTTGATATCGGT GAGTGCATTCTCGTAGACGACTCGCCGGCCGGGGCACAGTCCGGCATTGCCGCCGGCATCCCGGTATTTTACTTTTGCGC CGACCCCCACAACCCGGCGATCGACCATCCGCTGGTCACCACCTTTGACGATCTGCGCCAGCTCCCGCAGCTGTGGCGCC AGCGCGGCTGGCAACTGACCCGCGACGCATAA
Upstream 100 bases:
>100_bases TACCGAGGTTCGCATACCGGAAGAGAGCGCTTAAACTAGGACAAAAATAACGTTGATACGGCGCGGACATCTCCGCGCCG ACCGGCCAAAAAGGACGCCC
Downstream 100 bases:
>100_bases AAAAGGAGGGCCGCCCCTATAGGCGGCCCGATACGGTTCAGCGCGCGGCGACGTAGGAGGTTATGCCTCGTCCGTCCGCC TATGATCTGTCAGCAGCTGC
Product: 6-phosphogluconate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSSIRCILFDCDGTLVDSEMICSKAYVSMFSQYGITLSLEDIYREFKGVRLYEIIDVIQRRHPFTADRAEMESHYRAEVA RLFDSELQPIPHANELLNQVCVPMCTASNGPVSKMQSSLGATGMLPFFGDRLYSGYDIQRWKPLPDLLLHAARDMGVDIG ECILVDDSPAGAQSGIAAGIPVFYFCADPHNPAIDHPLVTTFDDLRQLPQLWRQRGWQLTRDA
Sequences:
>Translated_223_residues MSSIRCILFDCDGTLVDSEMICSKAYVSMFSQYGITLSLEDIYREFKGVRLYEIIDVIQRRHPFTADRAEMESHYRAEVA RLFDSELQPIPHANELLNQVCVPMCTASNGPVSKMQSSLGATGMLPFFGDRLYSGYDIQRWKPLPDLLLHAARDMGVDIG ECILVDDSPAGAQSGIAAGIPVFYFCADPHNPAIDHPLVTTFDDLRQLPQLWRQRGWQLTRDA >Mature_222_residues SSIRCILFDCDGTLVDSEMICSKAYVSMFSQYGITLSLEDIYREFKGVRLYEIIDVIQRRHPFTADRAEMESHYRAEVAR LFDSELQPIPHANELLNQVCVPMCTASNGPVSKMQSSLGATGMLPFFGDRLYSGYDIQRWKPLPDLLLHAARDMGVDIGE CILVDDSPAGAQSGIAAGIPVFYFCADPHNPAIDHPLVTTFDDLRQLPQLWRQRGWQLTRDA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=220, Percent_Identity=61.3636363636364, Blast_Score=295, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25093; Mature: 24962
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIRCILFDCDGTLVDSEMICSKAYVSMFSQYGITLSLEDIYREFKGVRLYEIIDVIQR CCCCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHH RHPFTADRAEMESHYRAEVARLFDSELQPIPHANELLNQVCVPMCTASNGPVSKMQSSLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCC ATGMLPFFGDRLYSGYDIQRWKPLPDLLLHAARDMGVDIGECILVDDSPAGAQSGIAAGI CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC PVFYFCADPHNPAIDHPLVTTFDDLRQLPQLWRQRGWQLTRDA CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSIRCILFDCDGTLVDSEMICSKAYVSMFSQYGITLSLEDIYREFKGVRLYEIIDVIQR CCCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHH RHPFTADRAEMESHYRAEVARLFDSELQPIPHANELLNQVCVPMCTASNGPVSKMQSSLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCC ATGMLPFFGDRLYSGYDIQRWKPLPDLLLHAARDMGVDIGECILVDDSPAGAQSGIAAGI CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC PVFYFCADPHNPAIDHPLVTTFDDLRQLPQLWRQRGWQLTRDA CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]