| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is engB
Identifier: 238921710
GI number: 238921710
Start: 3750828
End: 3751481
Strand: Direct
Name: engB
Synonym: NT01EI_3871
Alternate gene names: 238921710
Gene position: 3750828-3751481 (Clockwise)
Preceding gene: 238921706
Following gene: 238921713
Centisome position: 98.39
GC content: 56.12
Gene sequence:
>654_bases TTGGCCCGTCAAACTTACAACTACCATGTGACGCACTTCGTCACCAGCGCCCCCGATATTCGCCACCTGCCGGAAGATAC CGGTATTGAAGTGGCGTTTGCCGGGCGATCCAACGCTGGGAAATCCAGCGCGCTCAATACACTGACCAATCAAAAAAGCC TGGCGCGCACCAGTAAAACGCCGGGACGTACCCAGCTCATCAACCTGTTCGAGGTTGAGGATGGCATTCGCCTTGTCGAT CTGCCTGGCTATGGCTACGCCGAAGTCCCGGAAGAGATGAAGCGTAAATGGCAGCAGGCGTTGGGAGAGTATCTGCAGAA ACGGCAGTGCCTGAAGGGATTGGTCGTACTGATGGATATCCGACACCCGCTAAAAGATCTCGATCAGCAGATGATCGCCT GGGCGGTAGAGGTTGGCCTGCCTGTATTGCTGCTGTTAACCAAGGCCGATAAATTGGCCTCTGGCGCCCGCAAGGCGCAG CTGAATATGGTGCGAGAGGCGGTGCTGCCGTTTATGGGCGACATCCAGGTCGACGCATTCTCCTCCCTCAAAAAGTTTGG CGTCGATAAGCTGAGAGATAAGCTGGATACCTGGTTCAGCGAGATCACGCCTCAGCAGGCGGACAAGGACGACGATCCCA GCATCGGCGAGTAA
Upstream 100 bases:
>100_bases ACGCCATCCATGCCGGTGATACACGGATTTATACGCCCTTTCCCATCATTATGGTTATAATTCCTGCCATTATTCCTCCA GCAACAGGGAGACGATCCTC
Downstream 100 bases:
>100_bases TAACTCCCTGATGTATCGATACAATTAGCCGCGAGAGCGGCTTTTTTATGCTATTTTTCAGCAAAATATAAAAATAAGCG CATCAACTTATGCGGCGACA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MARQTYNYHVTHFVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVEDGIRLVD LPGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDIRHPLKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQ LNMVREAVLPFMGDIQVDAFSSLKKFGVDKLRDKLDTWFSEITPQQADKDDDPSIGE
Sequences:
>Translated_217_residues MARQTYNYHVTHFVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVEDGIRLVD LPGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDIRHPLKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQ LNMVREAVLPFMGDIQVDAFSSLKKFGVDKLRDKLDTWFSEITPQQADKDDDPSIGE >Mature_216_residues ARQTYNYHVTHFVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVEDGIRLVDL PGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDIRHPLKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQL NMVREAVLPFMGDIQVDAFSSLKKFGVDKLRDKLDTWFSEITPQQADKDDDPSIGE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=183, Percent_Identity=33.879781420765, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI145693205, Length=204, Percent_Identity=84.8039215686274, Blast_Score=357, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6320543, Length=184, Percent_Identity=32.6086956521739, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_EDWI9 (C5BC84)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002935225.1 - GeneID: 7959912 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3871 - OMA: THFVTSA - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 24311; Mature: 24180
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQTYNYHVTHFVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKT CCCCCCEEEEEEEECCCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC PGRTQLINLFEVEDGIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDI CCHHHHHHHEEECCCCEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHPLKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQLNMVREAVLPFMGDIQVDAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SSLKKFGVDKLRDKLDTWFSEITPQQADKDDDPSIGE HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ARQTYNYHVTHFVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKT CCCCCEEEEEEEECCCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC PGRTQLINLFEVEDGIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDI CCHHHHHHHEEECCCCEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHPLKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQLNMVREAVLPFMGDIQVDAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SSLKKFGVDKLRDKLDTWFSEITPQQADKDDDPSIGE HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA