Click here to switch to the map view.

The map label for this gene is yidE [C]

Identifier: 238921706

GI number: 238921706

Start: 3746350

End: 3748008

Strand: Direct

Name: yidE [C]

Synonym: NT01EI_3867

Alternate gene names: 238921706

Gene position: 3746350-3748008 (Clockwise)

Preceding gene: 238921705

Following gene: 238921710

Centisome position: 98.27

GC content: 59.25

Gene sequence:

>1659_bases
ATGAGCGATATCGCCCTTACGGTCAGTATGTTATCACTGGTCGCTGTGCTTGGGTTGTGGATTGGTAACTGGCGGATCTA
CGGCGTCGGTCTGGGGATTGGCGGCGTCCTGTTCGGCGGGATCATCGTCGGCCATTTTGCCCAGCGCTACCAGCTGGATC
TCAACAGTGATATGCTGCATTTTATTCAAGAGTTTGGCCTGATCCTGTTTGTCTACAGCATCGGTATTCAGGTAGGCCCC
GGCTTTTTCTCCTCGCTACGCGTTTCCGGCCTGCGCCTCAATGCCTTTGCCGTCCTAATGGTACTGATAAGCGGGCTGAT
TACCGCCGCCATTCACAAGCTATTTGCCGTCCCCTTGCCGATTATTCTCGGGATCTTCTCCGGTGCCGTCACTAACACCC
CCGCGCTGGGTGCCGGGCAGCAGATATTAACCGATCTGGGGTCCAACCCGTCCCAAATAGATCTGATGGGAATGGGCTAC
GCCATGGCCTATCCCTTTGGCATCTGCGGCATTCTGCTGGTGATTTGGCTGATACGCCTGCTGTTTCGCATCAATATCGA
CGCCGAAGCACGTGACTTCGACTCACGCAACGGTCATAGCCACGAGCTGCTGCAAACCATGAATATCATGGTGCGCAACC
CCAACCTGAGTGGACTGTCCATACAGGAGGTGCCGATCCTGAATAGTGATACCATCGTCTGCTCACGCCTCAAGCGCGGT
GATTTCCTCATGGTGCCACTGCCCACCACCCAGATCGAAAGCGGCGATCTGCTCCATCTGGTGGGGCAAAAGCAGGAGCT
GGAAAACGCCAGGCTGGTGATCGGCGAACAGGTTGACACCTCGCTGTCCACCCGCGGAACCGAGCTGCAGGTCAGCCGTG
TCGTGGTCACCAACGAGAGGGTTCTGGGAAAAAAGATCCGCGATCTCAACCTGAAGCAAAGGTACGATGTCGTGATCTCG
CGGCTTAACCGCGCCGGTGTCGAGCTGGTGGCCGGTAACAATGCGACGCTGCAGTTCGGCGATATTCTCAATCTGGTTGG
TCGGCCTCAGGCGATCGATGCCGTCGCTGCCATCGTCGGTAACGCCCAGCAAAAGCTGCAGCAGGTGCAGATGCTGCCGG
TCTTTATCGGTATCGGGCTGGGCGTTCTGCTGGGGTCGGTTCCGCTGTTCATTCCTGGCTTCCCGGCGGCGCTCAAGCTG
GGGCTGGCCGGCGGGCCGCTGGTGGTCGCTCTGATTCTGGGCCGTATCGGCAGCATCGGTAAGCTGTACTGGTTTATGCC
GCCCAGCGCCAACCTGGCGCTACGCGAACTGGGGATCGTGCTGTTCCTGGCGGTCGTCGGGCTAAAGTCCGGCGGCAACT
TCATCGACACGCTGCTCAACGGCGAAGGGGTCACCTGGATTGGCTATGGGATCCTGATCACCGCTATCCCGCTGCTCACG
GCAGCGCTCCTGGCACGTCTGATGATTAAGATGAACTATCTGACGCTCTGCGGCATGCTGGCAGGGGCGATGACCGATCC
CCCGGCGCTGGCCTTCGCCAACGGCCTACACGCCACCAGCGGGGCTGCAGCGCTCTCCTACGCCACGGTCTACCCTCTGG
CGATGTTCCTGCGCATTATGTCGCCCCAGCTGCTGGCGCTGCTGTTCTGGAGCGTCTGA

Upstream 100 bases:

>100_bases
CAACGCTCTGTAACAATATACAGGTGAGTTTTCCGTTACCCCAGCAGATCATCCGGTCGCGCGCGTTTCACCGGAGTCGT
TTAATTATCAAGGATGTATC

Downstream 100 bases:

>100_bases
ACCGCTAAGCCTAAAACGACAATCCCCGGCGTGCCGGGGATTGTCGTTTTAGGCTGGCGTCAGATGACGCGCGAAAACTG
CTTCATTCGGGCCTGATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSDIALTVSMLSLVAVLGLWIGNWRIYGVGLGIGGVLFGGIIVGHFAQRYQLDLNSDMLHFIQEFGLILFVYSIGIQVGP
GFFSSLRVSGLRLNAFAVLMVLISGLITAAIHKLFAVPLPIILGIFSGAVTNTPALGAGQQILTDLGSNPSQIDLMGMGY
AMAYPFGICGILLVIWLIRLLFRINIDAEARDFDSRNGHSHELLQTMNIMVRNPNLSGLSIQEVPILNSDTIVCSRLKRG
DFLMVPLPTTQIESGDLLHLVGQKQELENARLVIGEQVDTSLSTRGTELQVSRVVVTNERVLGKKIRDLNLKQRYDVVIS
RLNRAGVELVAGNNATLQFGDILNLVGRPQAIDAVAAIVGNAQQKLQQVQMLPVFIGIGLGVLLGSVPLFIPGFPAALKL
GLAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGNFIDTLLNGEGVTWIGYGILITAIPLLT
AALLARLMIKMNYLTLCGMLAGAMTDPPALAFANGLHATSGAAALSYATVYPLAMFLRIMSPQLLALLFWSV

Sequences:

>Translated_552_residues
MSDIALTVSMLSLVAVLGLWIGNWRIYGVGLGIGGVLFGGIIVGHFAQRYQLDLNSDMLHFIQEFGLILFVYSIGIQVGP
GFFSSLRVSGLRLNAFAVLMVLISGLITAAIHKLFAVPLPIILGIFSGAVTNTPALGAGQQILTDLGSNPSQIDLMGMGY
AMAYPFGICGILLVIWLIRLLFRINIDAEARDFDSRNGHSHELLQTMNIMVRNPNLSGLSIQEVPILNSDTIVCSRLKRG
DFLMVPLPTTQIESGDLLHLVGQKQELENARLVIGEQVDTSLSTRGTELQVSRVVVTNERVLGKKIRDLNLKQRYDVVIS
RLNRAGVELVAGNNATLQFGDILNLVGRPQAIDAVAAIVGNAQQKLQQVQMLPVFIGIGLGVLLGSVPLFIPGFPAALKL
GLAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGNFIDTLLNGEGVTWIGYGILITAIPLLT
AALLARLMIKMNYLTLCGMLAGAMTDPPALAFANGLHATSGAAALSYATVYPLAMFLRIMSPQLLALLFWSV
>Mature_551_residues
SDIALTVSMLSLVAVLGLWIGNWRIYGVGLGIGGVLFGGIIVGHFAQRYQLDLNSDMLHFIQEFGLILFVYSIGIQVGPG
FFSSLRVSGLRLNAFAVLMVLISGLITAAIHKLFAVPLPIILGIFSGAVTNTPALGAGQQILTDLGSNPSQIDLMGMGYA
MAYPFGICGILLVIWLIRLLFRINIDAEARDFDSRNGHSHELLQTMNIMVRNPNLSGLSIQEVPILNSDTIVCSRLKRGD
FLMVPLPTTQIESGDLLHLVGQKQELENARLVIGEQVDTSLSTRGTELQVSRVVVTNERVLGKKIRDLNLKQRYDVVISR
LNRAGVELVAGNNATLQFGDILNLVGRPQAIDAVAAIVGNAQQKLQQVQMLPVFIGIGLGVLLGSVPLFIPGFPAALKLG
LAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGNFIDTLLNGEGVTWIGYGILITAIPLLTA
ALLARLMIKMNYLTLCGMLAGAMTDPPALAFANGLHATSGAAALSYATVYPLAMFLRIMSPQLLALLFWSV

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI87082315, Length=552, Percent_Identity=74.8188405797101, Blast_Score=825, Evalue=0.0,
Organism=Escherichia coli, GI1787071, Length=559, Percent_Identity=24.5080500894454, Blast_Score=132, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3867_EDWI9 (C5BC80)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002935221.1
- GeneID:   7959908
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3867
- OMA:   RIMSPQL
- ProtClustDB:   PRK03818
- HAMAP:   MF_01016
- InterPro:   IPR006037
- InterPro:   IPR023018
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 59083; Mature: 58952

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x20a27040)-; HASH(0x2080cbc8)-; HASH(0x20c47bd0)-; HASH(0x20c47c3c)-; HASH(0x20aaeb4c)-; HASH(0x20c309d4)-; HASH(0x1a2a7840)-; HASH(0x20534950)-; HASH(0x20c47a2c)-; HASH(0x20c30b60)-; HASH(0x1b5a343c)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIALTVSMLSLVAVLGLWIGNWRIYGVGLGIGGVLFGGIIVGHFAQRYQLDLNSDMLH
CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHEECCCHHHHH
FIQEFGLILFVYSIGIQVGPGFFSSLRVSGLRLNAFAVLMVLISGLITAAIHKLFAVPLP
HHHHHHHHHHHHHHCCEECCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGIFSGAVTNTPALGAGQQILTDLGSNPSQIDLMGMGYAMAYPFGICGILLVIWLIRL
HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LFRINIDAEARDFDSRNGHSHELLQTMNIMVRNPNLSGLSIQEVPILNSDTIVCSRLKRG
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCCCCCCHHHHHHCCCC
DFLMVPLPTTQIESGDLLHLVGQKQELENARLVIGEQVDTSLSTRGTELQVSRVVVTNER
CEEEEECCCCCCCCCCEEEECCCHHHHCCCCEEECCCCCCHHHCCCCEEEEEEEEEECCH
VLGKKIRDLNLKQRYDVVISRLNRAGVELVAGNNATLQFGDILNLVGRPQAIDAVAAIVG
HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHHC
NAQQKLQQVQMLPVFIGIGLGVLLGSVPLFIPGFPAALKLGLAGGPLVVALILGRIGSIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLAVVGLKSGGNFIDTLLNGEGVTWIGYGILITAIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHH
AALLARLMIKMNYLTLCGMLAGAMTDPPALAFANGLHATSGAAALSYATVYPLAMFLRIM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SPQLLALLFWSV
CHHHHHHHHHCH
>Mature Secondary Structure 
SDIALTVSMLSLVAVLGLWIGNWRIYGVGLGIGGVLFGGIIVGHFAQRYQLDLNSDMLH
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHEECCCHHHHH
FIQEFGLILFVYSIGIQVGPGFFSSLRVSGLRLNAFAVLMVLISGLITAAIHKLFAVPLP
HHHHHHHHHHHHHHCCEECCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGIFSGAVTNTPALGAGQQILTDLGSNPSQIDLMGMGYAMAYPFGICGILLVIWLIRL
HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LFRINIDAEARDFDSRNGHSHELLQTMNIMVRNPNLSGLSIQEVPILNSDTIVCSRLKRG
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCCCCCCHHHHHHCCCC
DFLMVPLPTTQIESGDLLHLVGQKQELENARLVIGEQVDTSLSTRGTELQVSRVVVTNER
CEEEEECCCCCCCCCCEEEECCCHHHHCCCCEEECCCCCCHHHCCCCEEEEEEEEEECCH
VLGKKIRDLNLKQRYDVVISRLNRAGVELVAGNNATLQFGDILNLVGRPQAIDAVAAIVG
HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHHC
NAQQKLQQVQMLPVFIGIGLGVLLGSVPLFIPGFPAALKLGLAGGPLVVALILGRIGSIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLAVVGLKSGGNFIDTLLNGEGVTWIGYGILITAIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHH
AALLARLMIKMNYLTLCGMLAGAMTDPPALAFANGLHATSGAAALSYATVYPLAMFLRIM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SPQLLALLFWSV
CHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA