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The map label for this gene is uspA [H]

Identifier: 238921576

GI number: 238921576

Start: 3615606

End: 3616043

Strand: Direct

Name: uspA [H]

Synonym: NT01EI_3729

Alternate gene names: 238921576

Gene position: 3615606-3616043 (Clockwise)

Preceding gene: 238921574

Following gene: 238921578

Centisome position: 94.84

GC content: 52.05

Gene sequence:

>438_bases
ATGGCTTATAAACACATCCTGGTTGCTGTAGACCTTTCTCCGGAAAGTAACATACTGGTCGAAAAAGCCGTATCCATGGC
GCGCCCCTACAATGCCATGGTTTCGCTGATCCACGTAGACGTCAACTATTCCGATCTGTATACCGGCCTGATCGACGTTA
ATCTGGGCGATATGCAAAAACGTATCTCCGATGAAACGCACCATGCCCTGACCGAGCTGTCGCAAAACGCGGGCTATCCG
ATTACCGAAACCCTGAGCGGCAGCGGCGATCTTGGTCAGGTGCTGGTCGACGCCATCAAGAAATACGATATGGACTTAGT
CCTGTGCGGTCATCATCAGGACTTCTGGAGCAAGCTGATGTCCTCCGCCCGCCAGCTGATTAATACCGTTCATATCGACA
TGCTGATCGTCCCGCTGAAGGATGAAGGGGACGACTAA

Upstream 100 bases:

>100_bases
GCTGTCCGGACAGTGCTAACATACAGGCATCGCCAGCGCGCCCACCGGGACGGACGAAACCTGTAATCACCGTTAATCGG
CTTTAGGAAGGAGCTATATT

Downstream 100 bases:

>100_bases
CTTCACGTCGATCGTCCCGCGGTTGCTTTATCACGCCGGCGCGTCTCTACGCGTCGGCGTTTTTTATTTTGGCCACAGCA
TACCCCCAACCGTTCTTCAG

Product: UspA domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAYKHILVAVDLSPESNILVEKAVSMARPYNAMVSLIHVDVNYSDLYTGLIDVNLGDMQKRISDETHHALTELSQNAGYP
ITETLSGSGDLGQVLVDAIKKYDMDLVLCGHHQDFWSKLMSSARQLINTVHIDMLIVPLKDEGDD

Sequences:

>Translated_145_residues
MAYKHILVAVDLSPESNILVEKAVSMARPYNAMVSLIHVDVNYSDLYTGLIDVNLGDMQKRISDETHHALTELSQNAGYP
ITETLSGSGDLGQVLVDAIKKYDMDLVLCGHHQDFWSKLMSSARQLINTVHIDMLIVPLKDEGDD
>Mature_144_residues
AYKHILVAVDLSPESNILVEKAVSMARPYNAMVSLIHVDVNYSDLYTGLIDVNLGDMQKRISDETHHALTELSQNAGYPI
TETLSGSGDLGQVLVDAIKKYDMDLVLCGHHQDFWSKLMSSARQLINTVHIDMLIVPLKDEGDD

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1789909, Length=142, Percent_Identity=93.6619718309859, Blast_Score=278, Evalue=1e-76,
Organism=Escherichia coli, GI1788205, Length=140, Percent_Identity=38.5714285714286, Blast_Score=100, Evalue=3e-23,
Organism=Escherichia coli, GI1790358, Length=142, Percent_Identity=35.9154929577465, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: 1660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 290 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4003 Molecules/Cell In: Growth Phase, G

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16098; Mature: 15966

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKHILVAVDLSPESNILVEKAVSMARPYNAMVSLIHVDVNYSDLYTGLIDVNLGDMQK
CCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHEEEEEEECCCHHHHHHEEEECCHHHHHH
RISDETHHALTELSQNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVLCGHHQDFWSKLM
HHCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
SSARQLINTVHIDMLIVPLKDEGDD
HHHHHHHHHHEEEEEEEEECCCCCC
>Mature Secondary Structure 
AYKHILVAVDLSPESNILVEKAVSMARPYNAMVSLIHVDVNYSDLYTGLIDVNLGDMQK
CCCEEEEEEECCCCCCHHHHHHHHHHCCHHHEEEEEEECCCHHHHHHEEEECCHHHHHH
RISDETHHALTELSQNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVLCGHHQDFWSKLM
HHCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
SSARQLINTVHIDMLIVPLKDEGDD
HHHHHHHHHHEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]