Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is glgP [H]

Identifier: 238921526

GI number: 238921526

Start: 3570720

End: 3573170

Strand: Direct

Name: glgP [H]

Synonym: NT01EI_3678

Alternate gene names: 238921526

Gene position: 3570720-3573170 (Clockwise)

Preceding gene: 238921525

Following gene: 238921531

Centisome position: 93.66

GC content: 58.79

Gene sequence:

>2451_bases
ATGATTAACTCACCCTTTAACTATACGTCCCCCGTGATCAGCGTTGAGGCGCTCAAACACTCTATTGCCTATAAGCTGAT
GTTTACCGTCGGCAAGGATCCCTCCGTCGCCAACCAGCACGACTGGCTGAATGCGACCCTGTTCGCCGTTCGCGACCGTA
TCGTTGAATGCTGGCTGCGCTCGGTTCGCGCCCAATACTCGCAGGATCTGCGCCAGGTCTACTACCTTTCGATGGAGTTC
CTGCTGGGACGCACCCTCTCCAACGCCCTGATGGCTATCGGCGTGTATGACGAAACCAAAAAAGCACTCGATGAAATGGG
CATCGATCTGGATGAGCTGCTGAACGAGGAGCTGGACCCGGGGCTTGGCAACGGCGGTCTGGGGCGACTGGCGGCCTGCT
TCCTGGATTCGATGGCGACCCAGGGGCTGCCGGCCAACGGCTATGGCATCCGCTATGAATATGGCATGTTCAAACAGAAT
ATCGTCAACGGGCGGCAGGCCGAATCACCGGACAACTGGCTGGAGTATGGTAACGCCTGGGAGTTCGTCCGCCACAATAC
CCGCTACCGGGTTCGCTTTGGCGGCCGCATCCAGCAGGAGGGCAACCGCAGCCGCTGGCTGGAGACCGAAGAGGTTCTGG
CGCTGGCCTACGATCAGATAATCCCCGGCTTTGATATCTGCACGACCAATACCCTGCGTCTGTGGTCGGCGCGTGCCAGC
AGCGAGATTAACCTGGGTAAATTCAACCAGGGCGATTACTTTGCCGCCGTTGAGGATAAAAACCATTCGGAAAACGTATC
GCGTGTACTCTACCCGGACGACTCGACCTACTGCGGGCGCGAGCTGCGTCTGCGCCAGGAGTACTTTCTGGTCTCGGCGA
CAGTGCAGGACATCATCAGCCGTCATCTGCTCACCCACCATCGGCTGGATAACCTGGCAGACAAGGTGGCCATCCACCTG
AATGACACCCATCCGGTGCTCTCCATTCCGGAGCTGATGCGCCTGCTGATCGACGAGCATCACTACGACTGGGAGCAGTC
CTGGCAGGCCGTCATGCAGATCTTCTCCTATACCAACCACACCCTGATGAGCGAGGCGCTGGAAACCTGGCCGGTGGATA
TGCTGGGACGTATTCTGCCGCGCCATCTGCAGATCATTTTTGAGATCAACGACCACTTTCTCAAGGAGGTGCAGAGCGCC
TACCCCGACGACGATGCCCTGCTGCGCCGGGTGTCGATCATCGATGAGAGCAACGGCCGTCAGGTGCGTATGGCCTGGCT
GGCGGTGGTTGCCAGCCACAAGGTCAACGGCGTCTCCAAGCTGCACTCAGAGCTGATGGTGACCTCACTGTTCGCCGACT
TCGCCCGCCTGTTCCCTGGGCGCTTCTGTAACAAAACCAACGGGATAACCCCCCGTCGCTGGCTGGCGCTGGCCAATCAG
TCCCTGTCAAAGGTGCTGGACGGCGCTATCGGGCAGCGCTGGCGCACCGATCTGAGCATGCTCAGCGAGCTGCTACCGCA
CGCCGACTACCCCACCTTTATCCGCGAAATTCAACTGGCCAAGCAACACAATAAACGCCAGCTGGCGATGTACGTCGCAC
AACACCTGAATACGGTGATTAATCCCAAGGCGCTGTTTGACGTCCAGGTCAAACGCATTCACGAATATAAGCGCCAGCTG
CTCAACGTGCTGCACATCATTACGCTGTATAACCGTATCCTGCAGGAGCCGGACGCGGAGCGGGTGCCACGGGTGAAAAT
CTTCGCCGGTAAGGCGGCCTCCGCCTACTACAATGCCAAGCTGATCATCCGCCTGATCAACGACGTCGCCAGGGTGATCA
ACGCCGACGAGCGGCTGGGCGGTCAGCTGAAGGTCGTTTTCATCCCCAACTACAGCGTCAGCCTGGCGCAGCTGATCATT
CCAGCGGCCGATCTGTCAGAGCAGATCTCGACCGCCGGCACCGAGGCCTCCGGCACCAGCAATATGAAGTTCGCCCTTAA
CGGCGCGCTGACTATCGGTACCCTGGACGGCGCCAACGTTGAGATCCGCGAGCAGGTCGGCGCCGCAAATATATTTATCT
TCGGCAATACTACCGGGGAGGTGGAGGCGCTGCGGCGTAACGGCTATAACCCACGCGACTACTACGAGCGCGATCCGGAG
TTGAACCAGGTGCTGAACCAGATAGCCTCCGGGCTGTTTTGCCCAGAGGAGCCGCGGCGCTACGCCAGTCTGTTTGATGC
GCTGATTAACTTTGGCGATCACTATCAGCTGCTGGCGGACTACCGCAGCTATGTCGATATGCAGGATCAGGTGGATGAGG
TGTACGCCCACCCCGACGAGTGGGCGCGTAAGGCGCTGCAGAATATCGCCAACATGGGGTATTTCTCGTCAGACCGCACC
ATTCGTGAGTATGCCGACGAGATCTGGCAGATCAAACCGGTCAAGCTCTGA

Upstream 100 bases:

>100_bases
CTCTGGCGGAACAACCCCTGGCAGCACATGGATATGCGCAGGGGCCAACGCCGTACTACCATAACCGGGCATGGCCCGGC
ACCGAGGATCGGGAGCTGTC

Downstream 100 bases:

>100_bases
GTGGCCCAGCGAGCCAAGGCCTCCCGCAGGGGGCCTTGGCTATTTTCAGGAAGACGACGATGTCTCCGCCGCCGGGCGCC
GGGCCGCCAGCCACTCGGCC

Product: glycogen phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MINSPFNYTSPVISVEALKHSIAYKLMFTVGKDPSVANQHDWLNATLFAVRDRIVECWLRSVRAQYSQDLRQVYYLSMEF
LLGRTLSNALMAIGVYDETKKALDEMGIDLDELLNEELDPGLGNGGLGRLAACFLDSMATQGLPANGYGIRYEYGMFKQN
IVNGRQAESPDNWLEYGNAWEFVRHNTRYRVRFGGRIQQEGNRSRWLETEEVLALAYDQIIPGFDICTTNTLRLWSARAS
SEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYCGRELRLRQEYFLVSATVQDIISRHLLTHHRLDNLADKVAIHL
NDTHPVLSIPELMRLLIDEHHYDWEQSWQAVMQIFSYTNHTLMSEALETWPVDMLGRILPRHLQIIFEINDHFLKEVQSA
YPDDDALLRRVSIIDESNGRQVRMAWLAVVASHKVNGVSKLHSELMVTSLFADFARLFPGRFCNKTNGITPRRWLALANQ
SLSKVLDGAIGQRWRTDLSMLSELLPHADYPTFIREIQLAKQHNKRQLAMYVAQHLNTVINPKALFDVQVKRIHEYKRQL
LNVLHIITLYNRILQEPDAERVPRVKIFAGKAASAYYNAKLIIRLINDVARVINADERLGGQLKVVFIPNYSVSLAQLII
PAADLSEQISTAGTEASGTSNMKFALNGALTIGTLDGANVEIREQVGAANIFIFGNTTGEVEALRRNGYNPRDYYERDPE
LNQVLNQIASGLFCPEEPRRYASLFDALINFGDHYQLLADYRSYVDMQDQVDEVYAHPDEWARKALQNIANMGYFSSDRT
IREYADEIWQIKPVKL

Sequences:

>Translated_816_residues
MINSPFNYTSPVISVEALKHSIAYKLMFTVGKDPSVANQHDWLNATLFAVRDRIVECWLRSVRAQYSQDLRQVYYLSMEF
LLGRTLSNALMAIGVYDETKKALDEMGIDLDELLNEELDPGLGNGGLGRLAACFLDSMATQGLPANGYGIRYEYGMFKQN
IVNGRQAESPDNWLEYGNAWEFVRHNTRYRVRFGGRIQQEGNRSRWLETEEVLALAYDQIIPGFDICTTNTLRLWSARAS
SEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYCGRELRLRQEYFLVSATVQDIISRHLLTHHRLDNLADKVAIHL
NDTHPVLSIPELMRLLIDEHHYDWEQSWQAVMQIFSYTNHTLMSEALETWPVDMLGRILPRHLQIIFEINDHFLKEVQSA
YPDDDALLRRVSIIDESNGRQVRMAWLAVVASHKVNGVSKLHSELMVTSLFADFARLFPGRFCNKTNGITPRRWLALANQ
SLSKVLDGAIGQRWRTDLSMLSELLPHADYPTFIREIQLAKQHNKRQLAMYVAQHLNTVINPKALFDVQVKRIHEYKRQL
LNVLHIITLYNRILQEPDAERVPRVKIFAGKAASAYYNAKLIIRLINDVARVINADERLGGQLKVVFIPNYSVSLAQLII
PAADLSEQISTAGTEASGTSNMKFALNGALTIGTLDGANVEIREQVGAANIFIFGNTTGEVEALRRNGYNPRDYYERDPE
LNQVLNQIASGLFCPEEPRRYASLFDALINFGDHYQLLADYRSYVDMQDQVDEVYAHPDEWARKALQNIANMGYFSSDRT
IREYADEIWQIKPVKL
>Mature_816_residues
MINSPFNYTSPVISVEALKHSIAYKLMFTVGKDPSVANQHDWLNATLFAVRDRIVECWLRSVRAQYSQDLRQVYYLSMEF
LLGRTLSNALMAIGVYDETKKALDEMGIDLDELLNEELDPGLGNGGLGRLAACFLDSMATQGLPANGYGIRYEYGMFKQN
IVNGRQAESPDNWLEYGNAWEFVRHNTRYRVRFGGRIQQEGNRSRWLETEEVLALAYDQIIPGFDICTTNTLRLWSARAS
SEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYCGRELRLRQEYFLVSATVQDIISRHLLTHHRLDNLADKVAIHL
NDTHPVLSIPELMRLLIDEHHYDWEQSWQAVMQIFSYTNHTLMSEALETWPVDMLGRILPRHLQIIFEINDHFLKEVQSA
YPDDDALLRRVSIIDESNGRQVRMAWLAVVASHKVNGVSKLHSELMVTSLFADFARLFPGRFCNKTNGITPRRWLALANQ
SLSKVLDGAIGQRWRTDLSMLSELLPHADYPTFIREIQLAKQHNKRQLAMYVAQHLNTVINPKALFDVQVKRIHEYKRQL
LNVLHIITLYNRILQEPDAERVPRVKIFAGKAASAYYNAKLIIRLINDVARVINADERLGGQLKVVFIPNYSVSLAQLII
PAADLSEQISTAGTEASGTSNMKFALNGALTIGTLDGANVEIREQVGAANIFIFGNTTGEVEALRRNGYNPRDYYERDPE
LNQVLNQIASGLFCPEEPRRYASLFDALINFGDHYQLLADYRSYVDMQDQVDEVYAHPDEWARKALQNIANMGYFSSDRT
IREYADEIWQIKPVKL

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI21361370, Length=810, Percent_Identity=50.9876543209877, Blast_Score=808, Evalue=0.0,
Organism=Homo sapiens, GI5032009, Length=812, Percent_Identity=49.7536945812808, Blast_Score=797, Evalue=0.0,
Organism=Homo sapiens, GI71037379, Length=813, Percent_Identity=49.9384993849939, Blast_Score=793, Evalue=0.0,
Organism=Homo sapiens, GI255653002, Length=813, Percent_Identity=48.7084870848708, Blast_Score=747, Evalue=0.0,
Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=49.9248120300752, Blast_Score=689, Evalue=0.0,
Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=75.8282208588957, Blast_Score=1283, Evalue=0.0,
Organism=Escherichia coli, GI48994936, Length=768, Percent_Identity=46.3541666666667, Blast_Score=696, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17564550, Length=811, Percent_Identity=49.691738594328, Blast_Score=800, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32566204, Length=811, Percent_Identity=49.691738594328, Blast_Score=800, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325418, Length=811, Percent_Identity=47.1023427866831, Blast_Score=703, Evalue=0.0,
Organism=Drosophila melanogaster, GI78706832, Length=811, Percent_Identity=50.924784217016, Blast_Score=813, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581010, Length=811, Percent_Identity=50.924784217016, Blast_Score=813, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011833
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 93282; Mature: 93282

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSPFNYTSPVISVEALKHSIAYKLMFTVGKDPSVANQHDWLNATLFAVRDRIVECWLR
CCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SVRAQYSQDLRQVYYLSMEFLLGRTLSNALMAIGVYDETKKALDEMGIDLDELLNEELDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCHHHHHHHHCCC
GLGNGGLGRLAACFLDSMATQGLPANGYGIRYEYGMFKQNIVNGRQAESPDNWLEYGNAW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHCCCHH
EFVRHNTRYRVRFGGRIQQEGNRSRWLETEEVLALAYDQIIPGFDICTTNTLRLWSARAS
HHHHCCCEEEEEECCEECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCC
SEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYCGRELRLRQEYFLVSATVQDIIS
CCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RHLLTHHRLDNLADKVAIHLNDTHPVLSIPELMRLLIDEHHYDWEQSWQAVMQIFSYTNH
HHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TLMSEALETWPVDMLGRILPRHLQIIFEINDHFLKEVQSAYPDDDALLRRVSIIDESNGR
HHHHHHHHHCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
QVRMAWLAVVASHKVNGVSKLHSELMVTSLFADFARLFPGRFCNKTNGITPRRWLALANQ
EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHH
SLSKVLDGAIGQRWRTDLSMLSELLPHADYPTFIREIQLAKQHNKRQLAMYVAQHLNTVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NPKALFDVQVKRIHEYKRQLLNVLHIITLYNRILQEPDAERVPRVKIFAGKAASAYYNAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEECCCHHHHHHHH
LIIRLINDVARVINADERLGGQLKVVFIPNYSVSLAQLIIPAADLSEQISTAGTEASGTS
HHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCC
NMKFALNGALTIGTLDGANVEIREQVGAANIFIFGNTTGEVEALRRNGYNPRDYYERDPE
CCEEEEECEEEEEECCCCCEEHHHHCCCEEEEEEECCCCHHHHHHHCCCCCHHHCCCCCH
LNQVLNQIASGLFCPEEPRRYASLFDALINFGDHYQLLADYRSYVDMQDQVDEVYAHPDE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHH
WARKALQNIANMGYFSSDRTIREYADEIWQIKPVKL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MINSPFNYTSPVISVEALKHSIAYKLMFTVGKDPSVANQHDWLNATLFAVRDRIVECWLR
CCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SVRAQYSQDLRQVYYLSMEFLLGRTLSNALMAIGVYDETKKALDEMGIDLDELLNEELDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCHHHHHHHHCCC
GLGNGGLGRLAACFLDSMATQGLPANGYGIRYEYGMFKQNIVNGRQAESPDNWLEYGNAW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHCCCHH
EFVRHNTRYRVRFGGRIQQEGNRSRWLETEEVLALAYDQIIPGFDICTTNTLRLWSARAS
HHHHCCCEEEEEECCEECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCC
SEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYCGRELRLRQEYFLVSATVQDIIS
CCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RHLLTHHRLDNLADKVAIHLNDTHPVLSIPELMRLLIDEHHYDWEQSWQAVMQIFSYTNH
HHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TLMSEALETWPVDMLGRILPRHLQIIFEINDHFLKEVQSAYPDDDALLRRVSIIDESNGR
HHHHHHHHHCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
QVRMAWLAVVASHKVNGVSKLHSELMVTSLFADFARLFPGRFCNKTNGITPRRWLALANQ
EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHH
SLSKVLDGAIGQRWRTDLSMLSELLPHADYPTFIREIQLAKQHNKRQLAMYVAQHLNTVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NPKALFDVQVKRIHEYKRQLLNVLHIITLYNRILQEPDAERVPRVKIFAGKAASAYYNAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEECCCHHHHHHHH
LIIRLINDVARVINADERLGGQLKVVFIPNYSVSLAQLIIPAADLSEQISTAGTEASGTS
HHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCC
NMKFALNGALTIGTLDGANVEIREQVGAANIFIFGNTTGEVEALRRNGYNPRDYYERDPE
CCEEEEECEEEEEECCCCCEEHHHHCCCEEEEEEECCCCHHHHHHHCCCCCHHHCCCCCH
LNQVLNQIASGLFCPEEPRRYASLFDALINFGDHYQLLADYRSYVDMQDQVDEVYAHPDE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHH
WARKALQNIANMGYFSSDRTIREYADEIWQIKPVKL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]