Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 238921525

GI number: 238921525

Start: 3569141

End: 3570574

Strand: Direct

Name: glgA

Synonym: NT01EI_3677

Alternate gene names: 238921525

Gene position: 3569141-3570574 (Clockwise)

Preceding gene: 238921524

Following gene: 238921526

Centisome position: 93.62

GC content: 64.23

Gene sequence:

>1434_bases
ATGTACGTCTTACACGTGTGTTCTGAACTTTTCCCGCTGCTGAAAACCGGCGGTCTGGCCGATGTGGTCGGCGCAATGCC
CTCCGCCCAGATAGCCCAGGGTGCCAACGTACGCGTACTGGTGCCGGGGTTCCCGGCCATCTGTGCCGGGCTCCCGGACA
GCGATGAAGTGGCCACCCTGGACACCTTCGCCGGACGGGTAACCCTGCGCTACGGCGTCTACCGCGGCGTCGGAGTCTAC
CTGATCGACGCGCCCCATCTGTATCAGCGCCCCGGTAGCCCCTACCACGATCAGTGGCAGAACGCCTATGGAGATAACCA
CCTGCGCTTTGCGCTGCTCGGCTGGATCGCTGCCGAGTTGGCCTGTAACTGCGATCCCTTCTGGCGTCCGCAGGTGGTGC
ACGCCCACGACTGGCATGCCGGTCTGGCGTGTGCCTACCTGGCGGCGCGCGGCAACCCTGCCCGCTCGGTCTTCACCGTT
CACAATCTGGCCTATCAGGGGCTGTTCAACGCCCGCCATCTGGATGAGTTGGCCCTGCCCCATCACTTCTTCCAAATTTA
CGGACTGGAGTTTCACGGCCAAATCTCCTTCATGAAGGCCGGCCTGTACTATGCCGACCACGTCACCACCGTCAGCCCAA
CCTATGCGCAGGAGATAACGCACCCCGAGTTTGCCTATGGCATGGAAGGGCTGTTGCAGTGGCGCGCCCGGGAGGGCACC
CTGAGCGGGATACTCAACGGCGTGGACGATACCATTTGGAACCCGGCCAGCGACGCACTGATCGCCCGCACCTACCGACG
GGAGACGCTGCGCGATAAGGCCGAGAACAAACTGCACCTGCAGACGGCCATGGGGCTGGAGGTTAACGCTGACAAACCGC
TGTTCGCCGTGGTCAGCCGCCTCACCGATCAGAAAGGGCTTGATCTGCTACTGGCGGCGCTGCCTACGCTACTGGAGGGC
GGCGCTCAGCTGGCACTGCTCGGCGCCGGCGATGCCCAGCTGCAGGAGGCGTTTCTGGCTGTCGCCGCGGAGCACCCCGG
CCAGGTTGGTGTCCAGATCGGCTACCACGAGGCCTTCTCGCACCGCATCATGGCCGGTGCCGACGTGATCGTGGTACCAA
GCCGCTTTGAGCCCTGTGGGCTGACCCAGCTGTACGGCCTTAAATACGGCTCTCTGCCGCTGGTGCGTCACACCGGCGGC
CTGGCCGACACGGTCAACGACTGCGCGCTGGAAAATCTGGCCGACGGCAGCGCCACCGGCTTTGTCTTTCATGACGCCAA
CGCCGCTGACCTCGCCCGCGCTATCCGTCGGGCGCTGGTATTGTGGGGCCGTCCAACCCTGTGGCGCTACGTGCAACGGC
AGGCAATGGCGCAGTCATTCGGCTGGGATCTGGCCGCCGAACACTATCTGGCGCTGTACCGCCGACTACTGTAG

Upstream 100 bases:

>100_bases
TTTACCGTTCAGAAAGCGGCATCGTATTGGTAACGCGTGAAATGCTTGCGCGTCTGTAATCACCCCTGCGGTCTGACCGG
CCGCGGGCACAGGAGCAATA

Downstream 100 bases:

>100_bases
GCAGTGCCTACGCGGCCATACGATGCAGGCCGGCGCAGGTCGGCCCTCTGGCGGAACAACCCCTGGCAGCACATGGATAT
GCGCAGGGGCCAACGCCGTA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MYVLHVCSELFPLLKTGGLADVVGAMPSAQIAQGANVRVLVPGFPAICAGLPDSDEVATLDTFAGRVTLRYGVYRGVGVY
LIDAPHLYQRPGSPYHDQWQNAYGDNHLRFALLGWIAAELACNCDPFWRPQVVHAHDWHAGLACAYLAARGNPARSVFTV
HNLAYQGLFNARHLDELALPHHFFQIYGLEFHGQISFMKAGLYYADHVTTVSPTYAQEITHPEFAYGMEGLLQWRAREGT
LSGILNGVDDTIWNPASDALIARTYRRETLRDKAENKLHLQTAMGLEVNADKPLFAVVSRLTDQKGLDLLLAALPTLLEG
GAQLALLGAGDAQLQEAFLAVAAEHPGQVGVQIGYHEAFSHRIMAGADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGG
LADTVNDCALENLADGSATGFVFHDANAADLARAIRRALVLWGRPTLWRYVQRQAMAQSFGWDLAAEHYLALYRRLL

Sequences:

>Translated_477_residues
MYVLHVCSELFPLLKTGGLADVVGAMPSAQIAQGANVRVLVPGFPAICAGLPDSDEVATLDTFAGRVTLRYGVYRGVGVY
LIDAPHLYQRPGSPYHDQWQNAYGDNHLRFALLGWIAAELACNCDPFWRPQVVHAHDWHAGLACAYLAARGNPARSVFTV
HNLAYQGLFNARHLDELALPHHFFQIYGLEFHGQISFMKAGLYYADHVTTVSPTYAQEITHPEFAYGMEGLLQWRAREGT
LSGILNGVDDTIWNPASDALIARTYRRETLRDKAENKLHLQTAMGLEVNADKPLFAVVSRLTDQKGLDLLLAALPTLLEG
GAQLALLGAGDAQLQEAFLAVAAEHPGQVGVQIGYHEAFSHRIMAGADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGG
LADTVNDCALENLADGSATGFVFHDANAADLARAIRRALVLWGRPTLWRYVQRQAMAQSFGWDLAAEHYLALYRRLL
>Mature_477_residues
MYVLHVCSELFPLLKTGGLADVVGAMPSAQIAQGANVRVLVPGFPAICAGLPDSDEVATLDTFAGRVTLRYGVYRGVGVY
LIDAPHLYQRPGSPYHDQWQNAYGDNHLRFALLGWIAAELACNCDPFWRPQVVHAHDWHAGLACAYLAARGNPARSVFTV
HNLAYQGLFNARHLDELALPHHFFQIYGLEFHGQISFMKAGLYYADHVTTVSPTYAQEITHPEFAYGMEGLLQWRAREGT
LSGILNGVDDTIWNPASDALIARTYRRETLRDKAENKLHLQTAMGLEVNADKPLFAVVSRLTDQKGLDLLLAALPTLLEG
GAQLALLGAGDAQLQEAFLAVAAEHPGQVGVQIGYHEAFSHRIMAGADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGG
LADTVNDCALENLADGSATGFVFHDANAADLARAIRRALVLWGRPTLWRYVQRQAMAQSFGWDLAAEHYLALYRRLL

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=476, Percent_Identity=73.3193277310924, Blast_Score=717, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_EDWI9 (C5B965)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002935040.1
- GeneID:   7962185
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3677
- OMA:   GLTQLCA
- ProtClustDB:   PRK00654
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 52307; Mature: 52307

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00589 PTS_HPR_SER

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVLHVCSELFPLLKTGGLADVVGAMPSAQIAQGANVRVLVPGFPAICAGLPDSDEVATL
CCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCCCEEEEECCCHHHHCCCCCCCCEEEH
DTFAGRVTLRYGVYRGVGVYLIDAPHLYQRPGSPYHDQWQNAYGDNHLRFALLGWIAAEL
HHHCCEEEEEEEEECCCEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
ACNCDPFWRPQVVHAHDWHAGLACAYLAARGNPARSVFTVHNLAYQGLFNARHLDELALP
HCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC
HHFFQIYGLEFHGQISFMKAGLYYADHVTTVSPTYAQEITHPEFAYGMEGLLQWRAREGT
HHHHEEECEEECCEEEEEECCCEEECCEEECCCHHHHHCCCCHHHHHHHHHHHHHHCCCH
LSGILNGVDDTIWNPASDALIARTYRRETLRDKAENKLHLQTAMGLEVNADKPLFAVVSR
HHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCEEECCCCHHHHHHHH
LTDQKGLDLLLAALPTLLEGGAQLALLGAGDAQLQEAFLAVAAEHPGQVGVQIGYHEAFS
HCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
HRIMAGADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGGLADTVNDCALENLADGSATG
HHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCE
FVFHDANAADLARAIRRALVLWGRPTLWRYVQRQAMAQSFGWDLAAEHYLALYRRLL
EEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MYVLHVCSELFPLLKTGGLADVVGAMPSAQIAQGANVRVLVPGFPAICAGLPDSDEVATL
CCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCCCEEEEECCCHHHHCCCCCCCCEEEH
DTFAGRVTLRYGVYRGVGVYLIDAPHLYQRPGSPYHDQWQNAYGDNHLRFALLGWIAAEL
HHHCCEEEEEEEEECCCEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
ACNCDPFWRPQVVHAHDWHAGLACAYLAARGNPARSVFTVHNLAYQGLFNARHLDELALP
HCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC
HHFFQIYGLEFHGQISFMKAGLYYADHVTTVSPTYAQEITHPEFAYGMEGLLQWRAREGT
HHHHEEECEEECCEEEEEECCCEEECCEEECCCHHHHHCCCCHHHHHHHHHHHHHHCCCH
LSGILNGVDDTIWNPASDALIARTYRRETLRDKAENKLHLQTAMGLEVNADKPLFAVVSR
HHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCEEECCCCHHHHHHHH
LTDQKGLDLLLAALPTLLEGGAQLALLGAGDAQLQEAFLAVAAEHPGQVGVQIGYHEAFS
HCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
HRIMAGADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGGLADTVNDCALENLADGSATG
HHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCE
FVFHDANAADLARAIRRALVLWGRPTLWRYVQRQAMAQSFGWDLAAEHYLALYRRLL
EEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA