| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ulaA [H]
Identifier: 238921506
GI number: 238921506
Start: 3544431
End: 3545828
Strand: Direct
Name: ulaA [H]
Synonym: NT01EI_3658
Alternate gene names: 238921506
Gene position: 3544431-3545828 (Clockwise)
Preceding gene: 238921502
Following gene: 238921507
Centisome position: 92.97
GC content: 60.16
Gene sequence:
>1398_bases ATGGATATTCTGTACCGTGCCTTTCTGATTTTTTTCAATCAGGTGATGACCAATGCCCCCCTGCTGCTGGGGATTGTCAC CTGTCTCGGCTACCTGCTGCTGCGTAAACCGGCGACGGTGATCATCAAGGGCACCATCAAAACCATCATCGGCTTTATGC TGCTGCAGGCGGGATCCGGCATCCTGACGTCAACCTTCAAACCGGTGGTGGCCAAGATGTCTGAGGTCTATCACATCAAC GGAGCCATTTCAGACACCTACGCCTCGATGATGGCCACCATAGAGCGCATGGGCGACGCCTACAGCTGGGTAGGCTATAC CGTGCTGCTGGCGCTGGCGCTGAACATTCTCTACGTCCTGCTGCGCCGCCTCACCGGCATCCGCACCATCATGCTGACCG GCCACATCATGTTTCAGCAGGCCGGGCTTATCGCCGTGGTGTTCTATATCTTCGGCTATCCCATGTGGACCACGATCCTG TGCAGCGCGCTGCTGGTCTCGCTCTACTGGGGCATCACCGCCAACATGATGTATCGCCCCACTCAGGAGGTCACCGACGG CTGCGGCTTCTCCATTGGCCATCAGCAGCAGTTTGCCTCCTGGCTGGCCTATCGGTTGGCCCCCTATCTGGGGCGCAGGG AGGAGAGCGTGGAAGATCTCAGGTTGCCCGGCTGGCTGAATATCTTCCACGACAATATCGTCTCGACCGCAATCGTGATG ACCCTGTTCTTCGGGCTGATCCTCGGCTCTTTCGGGCTGGACGCCGTCCAGCTGATGGCGGGGAAAGCCCACTGGAGCAT CTACATCCTGCAGACCGGCTTCCAGTTCGCCGTCGCGATCTTCATCATCGTTCAGGGCGTGCGCATGTTTGTCGCGGAGC TGTCCGAGGCCTTCACCGGCATCTCCCAGCGCCTGATCCCCGGCGCCGTGCTGGCCATCGACTGCGCGGCCATCTACAGT TTTGCCCCCAACGCCGTCGTTTGGGGATTTATCTGGGGCACCATCGGGCAGCTGATCGCCATCGGCATCCTGATCCTGCT GGGGTCGCCTATCCTGATCATCCCCGGCTTTATCCCCATGTTCTTCTCCAACGCGACGATCGGCGTCTTTGCCAACCACT TCGGCGGCTGGCGGGCAGCCATCAAGATTTGTCTGGTCATGGGGATGATTGAAATCTTCGGCTGCGTCTGGGCCGTCAAA CTTACCGGGCTCAGCGCCTGGATGGGGATGGCCGACTGGTCCATCCTGGCTCCGCCGATGATCCAGGGACTGACGCTGGG GCTGTGGTTTATGGGCATTCTGCTGCTGATCGCCCTGGCTTACATGCTGGTTGCCGGGCGCAGCCTGCGGGCAGAAGAGG CGGCGCAGACCGATCCGGCGCGCGGCACAACACACTAA
Upstream 100 bases:
>100_bases TAAGTGATTTTTTATGATTGTTAGAGTGGTCAAATTATACATAGCCCTGAGCGCAATCCCCCGGATCCGCGCTCAGGATC CACGCCGAACGGAGAACGCT
Downstream 100 bases:
>100_bases CTCCATGGAGAAACATCATGACAGTACGCATTCTCGCCGTCTGCGGTAACGGCCAAGGCAGCTCAATGATCATGAAGATG AAGGTGGATCAGTTTCTGAC
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MDILYRAFLIFFNQVMTNAPLLLGIVTCLGYLLLRKPATVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYHIN GAISDTYASMMATIERMGDAYSWVGYTVLLALALNILYVLLRRLTGIRTIMLTGHIMFQQAGLIAVVFYIFGYPMWTTIL CSALLVSLYWGITANMMYRPTQEVTDGCGFSIGHQQQFASWLAYRLAPYLGRREESVEDLRLPGWLNIFHDNIVSTAIVM TLFFGLILGSFGLDAVQLMAGKAHWSIYILQTGFQFAVAIFIIVQGVRMFVAELSEAFTGISQRLIPGAVLAIDCAAIYS FAPNAVVWGFIWGTIGQLIAIGILILLGSPILIIPGFIPMFFSNATIGVFANHFGGWRAAIKICLVMGMIEIFGCVWAVK LTGLSAWMGMADWSILAPPMIQGLTLGLWFMGILLLIALAYMLVAGRSLRAEEAAQTDPARGTTH
Sequences:
>Translated_465_residues MDILYRAFLIFFNQVMTNAPLLLGIVTCLGYLLLRKPATVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYHIN GAISDTYASMMATIERMGDAYSWVGYTVLLALALNILYVLLRRLTGIRTIMLTGHIMFQQAGLIAVVFYIFGYPMWTTIL CSALLVSLYWGITANMMYRPTQEVTDGCGFSIGHQQQFASWLAYRLAPYLGRREESVEDLRLPGWLNIFHDNIVSTAIVM TLFFGLILGSFGLDAVQLMAGKAHWSIYILQTGFQFAVAIFIIVQGVRMFVAELSEAFTGISQRLIPGAVLAIDCAAIYS FAPNAVVWGFIWGTIGQLIAIGILILLGSPILIIPGFIPMFFSNATIGVFANHFGGWRAAIKICLVMGMIEIFGCVWAVK LTGLSAWMGMADWSILAPPMIQGLTLGLWFMGILLLIALAYMLVAGRSLRAEEAAQTDPARGTTH >Mature_465_residues MDILYRAFLIFFNQVMTNAPLLLGIVTCLGYLLLRKPATVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYHIN GAISDTYASMMATIERMGDAYSWVGYTVLLALALNILYVLLRRLTGIRTIMLTGHIMFQQAGLIAVVFYIFGYPMWTTIL CSALLVSLYWGITANMMYRPTQEVTDGCGFSIGHQQQFASWLAYRLAPYLGRREESVEDLRLPGWLNIFHDNIVSTAIVM TLFFGLILGSFGLDAVQLMAGKAHWSIYILQTGFQFAVAIFIIVQGVRMFVAELSEAFTGISQRLIPGAVLAIDCAAIYS FAPNAVVWGFIWGTIGQLIAIGILILLGSPILIIPGFIPMFFSNATIGVFANHFGGWRAAIKICLVMGMIEIFGCVWAVK LTGLSAWMGMADWSILAPPMIQGLTLGLWFMGILLLIALAYMLVAGRSLRAEEAAQTDPARGTTH
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=462, Percent_Identity=84.6320346320346, Blast_Score=785, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 51043; Mature: 51043
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILYRAFLIFFNQVMTNAPLLLGIVTCLGYLLLRKPATVIIKGTIKTIIGFMLLQAGSG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCC ILTSTFKPVVAKMSEVYHINGAISDTYASMMATIERMGDAYSWVGYTVLLALALNILYVL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LRRLTGIRTIMLTGHIMFQQAGLIAVVFYIFGYPMWTTILCSALLVSLYWGITANMMYRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TQEVTDGCGFSIGHQQQFASWLAYRLAPYLGRREESVEDLRLPGWLNIFHDNIVSTAIVM CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH TLFFGLILGSFGLDAVQLMAGKAHWSIYILQTGFQFAVAIFIIVQGVRMFVAELSEAFTG HHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFIWGTIGQLIAIGILILLGSPILIIPGFIPM HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHH FFSNATIGVFANHFGGWRAAIKICLVMGMIEIFGCVWAVKLTGLSAWMGMADWSILAPPM HHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHH IQGLTLGLWFMGILLLIALAYMLVAGRSLRAEEAAQTDPARGTTH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MDILYRAFLIFFNQVMTNAPLLLGIVTCLGYLLLRKPATVIIKGTIKTIIGFMLLQAGSG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCC ILTSTFKPVVAKMSEVYHINGAISDTYASMMATIERMGDAYSWVGYTVLLALALNILYVL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LRRLTGIRTIMLTGHIMFQQAGLIAVVFYIFGYPMWTTILCSALLVSLYWGITANMMYRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TQEVTDGCGFSIGHQQQFASWLAYRLAPYLGRREESVEDLRLPGWLNIFHDNIVSTAIVM CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH TLFFGLILGSFGLDAVQLMAGKAHWSIYILQTGFQFAVAIFIIVQGVRMFVAELSEAFTG HHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFIWGTIGQLIAIGILILLGSPILIIPGFIPM HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHH FFSNATIGVFANHFGGWRAAIKICLVMGMIEIFGCVWAVKLTGLSAWMGMADWSILAPPM HHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHH IQGLTLGLWFMGILLLIALAYMLVAGRSLRAEEAAQTDPARGTTH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]