Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238921371

Identifier: 238921371

GI number: 238921371

Start: 3407661

End: 3407819

Strand: Direct

Name: 238921371

Synonym: NT01EI_3515

Alternate gene names: NA

Gene position: 3407661-3407819 (Clockwise)

Preceding gene: 238921370

Following gene: 238921383

Centisome position: 89.39

GC content: 47.8

Gene sequence:

>159_bases
ATGGTCACCCCCATTTTTGCAACACTGATTTTTGATTATTGGTTGGCTTGCTTAAATCTATCCGGCGTCACTATGGGCAT
GGATGCCCGCACCACGATGAGTTCCGCGCCTGATGAACCTAAAAAGCCCCTCGGCTTCAGTGAGCCATTTTTTGTATGA

Upstream 100 bases:

>100_bases
ATGCACCCCGAGCGCCTGACCCAGCACGGTAACGGGACACCGCCGACGGCATAGCATCAAGATCCCCCCGCTCTCGCCGG
GGCCAAGAGACAAAAAATCT

Downstream 100 bases:

>100_bases
GGTTTCTCATCAGGCCGATATGCCGTTCATGTCATCAATAATCAGTCTTCGCAAAACCGGATGGGTAACTGCTATTTAAC
TACTTAATAATCAACCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV

Sequences:

>Translated_52_residues
MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
>Mature_52_residues
MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5746; Mature: 5746

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA