| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921371
Identifier: 238921371
GI number: 238921371
Start: 3407661
End: 3407819
Strand: Direct
Name: 238921371
Synonym: NT01EI_3515
Alternate gene names: NA
Gene position: 3407661-3407819 (Clockwise)
Preceding gene: 238921370
Following gene: 238921383
Centisome position: 89.39
GC content: 47.8
Gene sequence:
>159_bases ATGGTCACCCCCATTTTTGCAACACTGATTTTTGATTATTGGTTGGCTTGCTTAAATCTATCCGGCGTCACTATGGGCAT GGATGCCCGCACCACGATGAGTTCCGCGCCTGATGAACCTAAAAAGCCCCTCGGCTTCAGTGAGCCATTTTTTGTATGA
Upstream 100 bases:
>100_bases ATGCACCCCGAGCGCCTGACCCAGCACGGTAACGGGACACCGCCGACGGCATAGCATCAAGATCCCCCCGCTCTCGCCGG GGCCAAGAGACAAAAAATCT
Downstream 100 bases:
>100_bases GGTTTCTCATCAGGCCGATATGCCGTTCATGTCATCAATAATCAGTCTTCGCAAAACCGGATGGGTAACTGCTATTTAAC TACTTAATAATCAACCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
Sequences:
>Translated_52_residues MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV >Mature_52_residues MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5746; Mature: 5746
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTPIFATLIFDYWLACLNLSGVTMGMDARTTMSSAPDEPKKPLGFSEPFFV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA