Click here to switch to the map view.

The map label for this gene is yhdT [H]

Identifier: 238921358

GI number: 238921358

Start: 3398362

End: 3398604

Strand: Direct

Name: yhdT [H]

Synonym: NT01EI_3502

Alternate gene names: 238921358

Gene position: 3398362-3398604 (Clockwise)

Preceding gene: 238921357

Following gene: 238921359

Centisome position: 89.14

GC content: 60.08

Gene sequence:

>243_bases
ATGGATGCACGTTTCGCGCAGGCGCACCGTGAAGCCCGCTGGGCCTTAGGGCTGACGCTGGTCTATCTGTTCGCCTGGAT
TGCCGCAGGCTACCTGCCCAACAGCCTGCTGGGCATCACCGGTCTGCCGCACTGGTTCGAAATGGCCTGCCTGCTGCTGC
CACTGCTGTTTATTCTGCTGTGCTGGACCATGGTCCGCCTGATATTCAAGTCTATACCGCTGGGGAGCGATGATGCAGAC
TGA

Upstream 100 bases:

>100_bases
CCTTTTGTTTTCCTGCGTAAACCCGACGCTGCATCTGTGTGCGCATTGCCGTACAATTCCCTGCTTTTTGCTTGTTTGCT
TACCGATACTGGGAGATCCC

Downstream 100 bases:

>100_bases
CGTAATCCTGCCGCTGGTAGGCTACCTCGCCTTGGTGTTCGGCCTGTCGATTTACGCCTACCGTCGCCGCCAGAAAGGCA
ACTTCCTCAACGACTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDARFAQAHREARWALGLTLVYLFAWIAAGYLPNSLLGITGLPHWFEMACLLLPLLFILLCWTMVRLIFKSIPLGSDDAD

Sequences:

>Translated_80_residues
MDARFAQAHREARWALGLTLVYLFAWIAAGYLPNSLLGITGLPHWFEMACLLLPLLFILLCWTMVRLIFKSIPLGSDDAD
>Mature_80_residues
MDARFAQAHREARWALGLTLVYLFAWIAAGYLPNSLLGITGLPHWFEMACLLLPLLFILLCWTMVRLIFKSIPLGSDDAD

Specific function: Unknown

COG id: COG3924

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0974B [H]

Homologues:

Organism=Escherichia coli, GI1789655, Length=79, Percent_Identity=64.5569620253165, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010398
- ProDom:   PD745092 [H]

Pfam domain/function: PF06196 DUF997 [H]

EC number: NA

Molecular weight: Translated: 9050; Mature: 9050

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARFAQAHREARWALGLTLVYLFAWIAAGYLPNSLLGITGLPHWFEMACLLLPLLFILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
CWTMVRLIFKSIPLGSDDAD
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDARFAQAHREARWALGLTLVYLFAWIAAGYLPNSLLGITGLPHWFEMACLLLPLLFILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
CWTMVRLIFKSIPLGSDDAD
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2193919; 9278503 [H]