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The map label for this gene is yedY [H]

Identifier: 238921353

GI number: 238921353

Start: 3394396

End: 3395031

Strand: Direct

Name: yedY [H]

Synonym: NT01EI_3497

Alternate gene names: 238921353

Gene position: 3394396-3395031 (Clockwise)

Preceding gene: 238921352

Following gene: 238921354

Centisome position: 89.04

GC content: 60.53

Gene sequence:

>636_bases
ATGACTCTGGATATGGACGATATCCTGCGCCGCTTCCCGCTGCAGGAGCGCATCTACCGCATGCGCTGCGTAGAGGCCTG
GTCCATGGTGATCCCCTGGGTCGGTTTTGAGCTGGGACAGCTGCTGCGCCAGGCCGAGCCCACCAGCCGGGCGCGCTATG
TCGCCTTTACCACCCTGTACGATCCCGAACAGATGCCGGGTCAAAAGGATCGCTTTATCGGCGGCGGTCTGAAGTACCCC
TATGTCGAAGGGCTGCGGATAGATGAAGCCATGCACCCGCTGACCCTGCTCAGCGTCGGCGTCTACGGCAAAGGGTTGCC
GCCACAAAACGGGGCGCCGATCCGCCTGACGGTGCCGTGGAAATACGGTTTTAAAGGTATCAAGTCGATCGTGCACATCC
GCCTGGTGGAAAATGCGCCACCCACTACCTGGAATCTGCTCGCCCCCAAAGAGTACGGCTTTTATGCCAACGTCAATCCG
CAGGTTGACCACCCGCGCTGGTCCCAGGCCAGCGAGCGACTGATCGGCAGCGGTGGGATTCTGGACGTCAAGCGGCAGCC
AACGCTGCCGTTTAACGGCTATGCCGATCAGGTCGCCTCGCTGTATCAGGGGATGGACCTGAGGAAATACTACTGA

Upstream 100 bases:

>100_bases
TACGAATTTTGGCCTGGACAAGGCCGATCCGGCCGCCAACGCGGGCTCTCTGCGCACCGACGGCTGGACTATCACCCTCG
ACGGTGAGGTGGCCAAACCG

Downstream 100 bases:

>100_bases
TGAGGCGCCTGAACCCTGCCCGGATTACCGCGCTGAAGTGGCTGATTTGGCTGGCGGCGGGCCTGCCGCTGCTGTGGCTG
CCGCTGGCGGCCTCACAGGG

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTLDMDDILRRFPLQERIYRMRCVEAWSMVIPWVGFELGQLLRQAEPTSRARYVAFTTLYDPEQMPGQKDRFIGGGLKYP
YVEGLRIDEAMHPLTLLSVGVYGKGLPPQNGAPIRLTVPWKYGFKGIKSIVHIRLVENAPPTTWNLLAPKEYGFYANVNP
QVDHPRWSQASERLIGSGGILDVKRQPTLPFNGYADQVASLYQGMDLRKYY

Sequences:

>Translated_211_residues
MTLDMDDILRRFPLQERIYRMRCVEAWSMVIPWVGFELGQLLRQAEPTSRARYVAFTTLYDPEQMPGQKDRFIGGGLKYP
YVEGLRIDEAMHPLTLLSVGVYGKGLPPQNGAPIRLTVPWKYGFKGIKSIVHIRLVENAPPTTWNLLAPKEYGFYANVNP
QVDHPRWSQASERLIGSGGILDVKRQPTLPFNGYADQVASLYQGMDLRKYY
>Mature_210_residues
TLDMDDILRRFPLQERIYRMRCVEAWSMVIPWVGFELGQLLRQAEPTSRARYVAFTTLYDPEQMPGQKDRFIGGGLKYPY
VEGLRIDEAMHPLTLLSVGVYGKGLPPQNGAPIRLTVPWKYGFKGIKSIVHIRLVENAPPTTWNLLAPKEYGFYANVNPQ
VDHPRWSQASERLIGSGGILDVKRQPTLPFNGYADQVASLYQGMDLRKYY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=211, Percent_Identity=79.6208530805687, Blast_Score=362, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 24136; Mature: 24005

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDMDDILRRFPLQERIYRMRCVEAWSMVIPWVGFELGQLLRQAEPTSRARYVAFTTLY
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEEEE
DPEQMPGQKDRFIGGGLKYPYVEGLRIDEAMHPLTLLSVGVYGKGLPPQNGAPIRLTVPW
CHHHCCCCCCCEECCCCCCCCCCCEEHHHHHCCHHHEEECCCCCCCCCCCCCCEEEEECH
KYGFKGIKSIVHIRLVENAPPTTWNLLAPKEYGFYANVNPQVDHPRWSQASERLIGSGGI
HHHHHHHHHHEEEEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCE
LDVKRQPTLPFNGYADQVASLYQGMDLRKYY
EEECCCCCCCCCCHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure 
TLDMDDILRRFPLQERIYRMRCVEAWSMVIPWVGFELGQLLRQAEPTSRARYVAFTTLY
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEEEE
DPEQMPGQKDRFIGGGLKYPYVEGLRIDEAMHPLTLLSVGVYGKGLPPQNGAPIRLTVPW
CHHHCCCCCCCEECCCCCCCCCCCEEHHHHHCCHHHEEECCCCCCCCCCCCCCEEEEECH
KYGFKGIKSIVHIRLVENAPPTTWNLLAPKEYGFYANVNPQVDHPRWSQASERLIGSGGI
HHHHHHHHHHEEEEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCE
LDVKRQPTLPFNGYADQVASLYQGMDLRKYY
EEECCCCCCCCCCHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA