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The map label for this gene is yedY [H]

Identifier: 238921352

GI number: 238921352

Start: 3394029

End: 3394382

Strand: Direct

Name: yedY [H]

Synonym: NT01EI_3496

Alternate gene names: 238921352

Gene position: 3394029-3394382 (Clockwise)

Preceding gene: 238921351

Following gene: 238921353

Centisome position: 89.03

GC content: 66.1

Gene sequence:

>354_bases
ATGGCCCGATACCCAACACTGCGCGATGCCGATGTCACCCCTGAAGATCTGTTCTACCAGCGGCGACGCGTACTCAAAGC
GCTCGGCATCAGCGCCGCGGCGCTGGCCATCACCCCGTCGGCCCACGCCGATCTGCTCAGCTGGTTTAAGGGGAACGATC
GTCCGCCGGCGCCGCCGGGCAAGGCGCTGGAGTTCACCCGCCCCCCCACCTGGCAGGCCGATCTGCCGCTGACCCCGGAA
GACAAGGTCAGCGGCTACAACAACTTCTACGAATTTTGGCCTGGACAAGGCCGATCCGGCCGCCAACGCGGGCTCTCTGC
GCACCGACGGCTGGACTATCACCCTCGACGGTGA

Upstream 100 bases:

>100_bases
GGGCTCCCGCCGCCAAGTATAACAATTTTGTGATACTCACCACACCCGGTCACTTTCCTGCCATGATGTAGAATAAGACC
TATTATCAAGGAGTGCGACC

Downstream 100 bases:

>100_bases
GGTGGCCAAACCGATGACTCTGGATATGGACGATATCCTGCGCCGCTTCCCGCTGCAGGAGCGCATCTACCGCATGCGCT
GCGTAGAGGCCTGGTCCATG

Product: protein YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MARYPTLRDADVTPEDLFYQRRRVLKALGISAAALAITPSAHADLLSWFKGNDRPPAPPGKALEFTRPPTWQADLPLTPE
DKVSGYNNFYEFWPGQGRSGRQRGLSAHRRLDYHPRR

Sequences:

>Translated_117_residues
MARYPTLRDADVTPEDLFYQRRRVLKALGISAAALAITPSAHADLLSWFKGNDRPPAPPGKALEFTRPPTWQADLPLTPE
DKVSGYNNFYEFWPGQGRSGRQRGLSAHRRLDYHPRR
>Mature_116_residues
ARYPTLRDADVTPEDLFYQRRRVLKALGISAAALAITPSAHADLLSWFKGNDRPPAPPGKALEFTRPPTWQADLPLTPED
KVSGYNNFYEFWPGQGRSGRQRGLSAHRRLDYHPRR

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=93, Percent_Identity=68.8172043010753, Blast_Score=133, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 13316; Mature: 13185

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYPTLRDADVTPEDLFYQRRRVLKALGISAAALAITPSAHADLLSWFKGNDRPPAPPG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCC
KALEFTRPPTWQADLPLTPEDKVSGYNNFYEFWPGQGRSGRQRGLSAHRRLDYHPRR
CCEECCCCCCCCCCCCCCCCHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARYPTLRDADVTPEDLFYQRRRVLKALGISAAALAITPSAHADLLSWFKGNDRPPAPPG
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCC
KALEFTRPPTWQADLPLTPEDKVSGYNNFYEFWPGQGRSGRQRGLSAHRRLDYHPRR
CCEECCCCCCCCCCCCCCCCHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA