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The map label for this gene is hupE [H]

Identifier: 238921350

GI number: 238921350

Start: 3392259

End: 3392870

Strand: Direct

Name: hupE [H]

Synonym: NT01EI_3494

Alternate gene names: 238921350

Gene position: 3392259-3392870 (Clockwise)

Preceding gene: 238921339

Following gene: 238921351

Centisome position: 88.98

GC content: 66.18

Gene sequence:

>612_bases
ATGAAAAAATTATCTTTTCTGAGCAGCCTACACGGCCTGCTCCTACTCCTGCTGCTGTGCGCCGCGACGCCGACGCTGGC
TCACACCGGTGTCGGGGCGACCCACGGCTTCTGGGCGGGTGCCTACCACCCGCTTTCCGGCCTCGATCACCTGCTGGCGA
TGTTAACGGTGGGGCTGTGGGCCGCCCAGCGCGGCGGTAAGGCGCTGTGGGGGATCCCCGCCGCTTTTGTTCTCACCATG
ATCGTCGGCGGTGCCCTGGCTCTGGTATTCAACAGGGTGCCCGGACAGGCAATTGAATTCGGCATCACCGCCTCAGTGCT
GGTGCTGGGACTGCTGGTCGCCGCCCGGGTACGTCTTCCCCTGCTGCCAAGCTGCCTGCTGGTCGGGCTGTTCGCCCTGT
TTCACGGCTACGCCCACGGCATGGAGATGCCGGCAGACGCCGACGGTCTGAGCTACGGCCTGGGGTTCGCCCTGGTGACC
GCCCTGCTGCACGGGGCCGGGCTAACGCTGGGGCTGCTGTTCGGGTACATCGAGCGGCGCGGGGTGCATTATCTGACGCC
GCTCACCGGCGGAATGGTCGCCGTCGCAGGCGGCGCCCTATTCCTGTTATAG

Upstream 100 bases:

>100_bases
TCGCCACCGCACTTTACATCGCCGTAGAGACACACCAAAAATCCCCTTGCAATACAATATATTAAACATAAACTCAATGA
TTAATAGACAGGGTTATCCT

Downstream 100 bases:

>100_bases
AATAGGCATCGCCGCCGCAGAAACGCGTCGGTATTCAGCCACTCAATCAACAGGATCCCATCATGAAAGCGCTGCTACTC
GACAACCGTGACGGTCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKKLSFLSSLHGLLLLLLLCAATPTLAHTGVGATHGFWAGAYHPLSGLDHLLAMLTVGLWAAQRGGKALWGIPAAFVLTM
IVGGALALVFNRVPGQAIEFGITASVLVLGLLVAARVRLPLLPSCLLVGLFALFHGYAHGMEMPADADGLSYGLGFALVT
ALLHGAGLTLGLLFGYIERRGVHYLTPLTGGMVAVAGGALFLL

Sequences:

>Translated_203_residues
MKKLSFLSSLHGLLLLLLLCAATPTLAHTGVGATHGFWAGAYHPLSGLDHLLAMLTVGLWAAQRGGKALWGIPAAFVLTM
IVGGALALVFNRVPGQAIEFGITASVLVLGLLVAARVRLPLLPSCLLVGLFALFHGYAHGMEMPADADGLSYGLGFALVT
ALLHGAGLTLGLLFGYIERRGVHYLTPLTGGMVAVAGGALFLL
>Mature_203_residues
MKKLSFLSSLHGLLLLLLLCAATPTLAHTGVGATHGFWAGAYHPLSGLDHLLAMLTVGLWAAQRGGKALWGIPAAFVLTM
IVGGALALVFNRVPGQAIEFGITASVLVLGLLVAARVRLPLLPSCLLVGLFALFHGYAHGMEMPADADGLSYGLGFALVT
ALLHGAGLTLGLLFGYIERRGVHYLTPLTGGMVAVAGGALFLL

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 20976; Mature: 20976

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSFLSSLHGLLLLLLLCAATPTLAHTGVGATHGFWAGAYHPLSGLDHLLAMLTVGLW
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAQRGGKALWGIPAAFVLTMIVGGALALVFNRVPGQAIEFGITASVLVLGLLVAARVRLP
HHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LLPSCLLVGLFALFHGYAHGMEMPADADGLSYGLGFALVTALLHGAGLTLGLLFGYIERR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GVHYLTPLTGGMVAVAGGALFLL
CCEEECCCCCCHHHHHCCHHHCC
>Mature Secondary Structure
MKKLSFLSSLHGLLLLLLLCAATPTLAHTGVGATHGFWAGAYHPLSGLDHLLAMLTVGLW
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAQRGGKALWGIPAAFVLTMIVGGALALVFNRVPGQAIEFGITASVLVLGLLVAARVRLP
HHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LLPSCLLVGLFALFHGYAHGMEMPADADGLSYGLGFALVTALLHGAGLTLGLLFGYIERR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GVHYLTPLTGGMVAVAGGALFLL
CCEEECCCCCCHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]