Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238921323

Identifier: 238921323

GI number: 238921323

Start: 3360877

End: 3361026

Strand: Direct

Name: 238921323

Synonym: NT01EI_3467

Alternate gene names: NA

Gene position: 3360877-3361026 (Clockwise)

Preceding gene: 238921318

Following gene: 238921324

Centisome position: 88.16

GC content: 36.67

Gene sequence:

>150_bases
ATGAGTAGTAATGAACCTAGTAAGCCATATTACGGCGATAAAATGTTTGATAAGGAGCAAATACGCGCACAAAACGAAAC
CAAAATGACGACAAAAGATCATTGGCGTGATCTCATCCACATTTTTAATACATTTCAATCACGCGAATAG

Upstream 100 bases:

>100_bases
AGTCACGGGCGATACCGGCGCCGGTGGCGCCGCCGCCGATAATGACGACATCAGTTTCCTGTGATGCGGGGCTCTGTAAC
ATGAGTGGCTCCCAAGCCAA

Downstream 100 bases:

>100_bases
ATGTTATTTTTTTACTCCATGGATTAATTTGTATATCAATATCATAAAACTGTAACAATATGAGCGATCTCTCACAGTAT
CAGCTTTCGCAATTGCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 48

Protein sequence:

>49_residues
MSSNEPSKPYYGDKMFDKEQIRAQNETKMTTKDHWRDLIHIFNTFQSRE

Sequences:

>Translated_49_residues
MSSNEPSKPYYGDKMFDKEQIRAQNETKMTTKDHWRDLIHIFNTFQSRE
>Mature_48_residues
SSNEPSKPYYGDKMFDKEQIRAQNETKMTTKDHWRDLIHIFNTFQSRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5981; Mature: 5850

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNEPSKPYYGDKMFDKEQIRAQNETKMTTKDHWRDLIHIFNTFQSRE
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSNEPSKPYYGDKMFDKEQIRAQNETKMTTKDHWRDLIHIFNTFQSRE
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA