Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921295

Identifier: 238921295

GI number: 238921295

Start: 3327023

End: 3327577

Strand: Direct

Name: 238921295

Synonym: NT01EI_3438

Alternate gene names: NA

Gene position: 3327023-3327577 (Clockwise)

Preceding gene: 238921293

Following gene: 238921307

Centisome position: 87.27

GC content: 51.17

Gene sequence:

>555_bases
ATGTTCAATTTCAATAAATCAGATATAAATGCCCTGAGCCTGATCATGGTTCCGCTTATTTTATCTATAATTGGTATCTG
GATTAACCCGGCAATCATCGGGCCCGCCAGCCTCGGCAGCTGCATTTTTTATGTTTACACCGACCGTAAGCAACGCAAAC
AGGCCGGGGTGAAGTCTCCCTCATTCTGGTGGTGGCTGCTGTCACCGGTCTATCTGTGGAAACGCGACACTCTGGACAGC
CGGGCCAAACATCCCCTGTTTCTGCTCTGGTGCGTATCCATCGTGGTAATGGTGCTGATCAGCCTGGCGGATGAGGCCAA
GGACTCCAATCAGCAGGTGAAAACCCGCACCTGCGAACTGGTGACGGAAATCATGCACGATAACCGCATTGAAGGATCCT
GTGTCAAGACCATGGAGCTGAACCGGGTGGAAGGCACCGAGTTCTATCGTGGCACCGTATTGATCACTAACGGTAACGAG
GTACCCGTCACCACCGATATGCAGAAGGATGGGAACATCTACGTGCGTATCACCGATACTTCTACTTTGCGTTAA

Upstream 100 bases:

>100_bases
CAATATCCGCAGTACTAAAAACGATAAATTTATCTTAGTTCGCTTTACATATGCCGAAAGGCGCTATTTGGTGTGGTTAA
AATGCAAAAGGAAACACGTT

Downstream 100 bases:

>100_bases
ACAATCACGATGGCTGAAGGAGGTCGCGCCTTCAGCCACCTCTCAACCTATGCTATTTTTGGATTGGACTGCTCCCAAAA
CCATAGACAAATTCTGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSPSFWWWLLSPVYLWKRDTLDS
RAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCELVTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNE
VPVTTDMQKDGNIYVRITDTSTLR

Sequences:

>Translated_184_residues
MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSPSFWWWLLSPVYLWKRDTLDS
RAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCELVTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNE
VPVTTDMQKDGNIYVRITDTSTLR
>Mature_184_residues
MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSPSFWWWLLSPVYLWKRDTLDS
RAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCELVTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNE
VPVTTDMQKDGNIYVRITDTSTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20990; Mature: 20990

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCHHHHHCCCCCC
SFWWWLLSPVYLWKRDTLDSRAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCEL
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNEVPVTTDMQKDGNIYVRITDT
HHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCEEEEEECC
STLR
CCCC
>Mature Secondary Structure
MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCHHHHHCCCCCC
SFWWWLLSPVYLWKRDTLDSRAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCEL
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNEVPVTTDMQKDGNIYVRITDT
HHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCEEEEEECC
STLR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA