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The map label for this gene is recA

Identifier: 238921102

GI number: 238921102

Start: 3113575

End: 3114636

Strand: Reverse

Name: recA

Synonym: NT01EI_3241

Alternate gene names: 238921102

Gene position: 3114636-3113575 (Counterclockwise)

Preceding gene: 238921103

Following gene: 238921101

Centisome position: 81.7

GC content: 57.72

Gene sequence:

>1062_bases
ATGGACGAGAACAAACAACGTGCCCTGGCTGCGGCGTTAGGCCAGATTGAAAAGCAGTTTGGTAAAGGTTCTATCATGCG
TCTGGGAGATACCCAAACGCTGGACATTGAGTCCATTTCAACCGGTTCTCTGAGTCTGGACGTCGCGCTGGGTATCGGCG
GTCTGCCGATGGGGCGCATCGTTGAGATCTTTGGGCCCGAGTCCTCCGGTAAAACCACGCTGACCCTGTCAGTCATCGCT
TGTGCACAGGCTGCAGGAAAGACCTGTGCCTTTATTGACGCCGAACACGCACTGGATCCGATCTATGCCGCCAAGCTGGG
GGTAAACGTCGATGATCTGCTGGTGTCGCAGCCGGATACCGGTGAGCAGGCGCTGGAGATCTGCGATGCGCTGGTGCGCT
CCGGCGCCGTCGATGTGATCATCGTGGACTCCGTAGCAGCCCTGACGCCGAAGGCGGAGATCGAGGGCGAAATGGGGGAC
TCTCACGTTGGCCTGCAGGCGCGTCTAATGTCTCAGGCGCTGCGTAAGCTGACTGCCAATATCAAAAACGCCAACTGTCT
GGTGGTGTTTATCAACCAGATTCGTATGAAAATCGGCGTGATGTTCGGTAACCCAGAGACCACCACCGGCGGTAACGCGC
TGAAGTTCTACTCTTCCGTGCGTCTGGATATCCGTCGCATCGGTGCCATCAAAGAGGGCGATGAGGTGGTCGGCAACGAG
ACCCGCGTCAAGGTGGTCAAGAACAAAGTAGCCCCGCCATTCCGTCAGGCTGAGTTTCAGATCCTGTACGGTGCCGGTAT
CTCCAAGGAGAGCGAGCTGATCGATCTGGGCGTTAAGCACAAGCTGCTGGATAAATCCGGCGCCTGGTACAGCTACAATG
GCGACAAGATTGGCCAAGGTAAAGCGAACTCCATGAAGTTCCTGCAGGAGAATACGACGATCTCTGCTGAGCTGGAGGGC
AAGCTGCGTGAGCTGCTGCTGAGCCACGCCGCGGCGACCGACGCCGAGCGGGCGGGTGCCGAACGCGAAGACAACGCGGC
GGCGGATGATGAAAACTTCTAA

Upstream 100 bases:

>100_bases
CGGACGCTACTGGAAAAATTTCTTATGTGAGTCTTGATGCTGTATGAGTATACAGTATAATCAAGGTCAATTTCAGATTT
GCTATGCGTGGAGTAAGCGG

Downstream 100 bases:

>100_bases
TTCTGGCGGCCATGGGGACGGCGCGGCGAGGTCTGCGTGAGCGACGCGCTTAACCGGGCCATGCGTCTGCTGGCCCAGCG
AGACCACAGCGAGAATGAAC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIESISTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIA
CAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDTGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE
TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQGKANSMKFLQENTTISAELEG
KLRELLLSHAAATDAERAGAEREDNAAADDENF

Sequences:

>Translated_353_residues
MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIESISTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIA
CAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDTGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE
TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQGKANSMKFLQENTTISAELEG
KLRELLLSHAAATDAERAGAEREDNAAADDENF
>Mature_353_residues
MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIESISTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIA
CAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDTGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE
TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQGKANSMKFLQENTTISAELEG
KLRELLLSHAAATDAERAGAEREDNAAADDENF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=333, Percent_Identity=77.7777777777778, Blast_Score=545, Evalue=1e-156,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_EDWI9 (C5BGH6)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002934617.1
- GeneID:   7961074
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3241
- OMA:   IEINENQ
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37636; Mature: 37636

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIESISTGSLSLDVALGIGGLPMGRI
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCHHHE
VEIFGPESSGKTTLTLSVIACAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDT
EEEECCCCCCCEEEEEEHHHHHHHCCCEEEEEEHHHHCCCHHHHHHCCCHHHHEECCCCC
GEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTAN
HHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
IKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE
CCCCCEEEEEEEHHEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHCCCC
TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQG
CEEEEEHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCCEEEECCCCCCCC
KANSMKFLQENTTISAELEGKLRELLLSHAAATDAERAGAEREDNAAADDENF
CCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIESISTGSLSLDVALGIGGLPMGRI
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCHHHE
VEIFGPESSGKTTLTLSVIACAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDT
EEEECCCCCCCEEEEEEHHHHHHHCCCEEEEEEHHHHCCCHHHHHHCCCHHHHEECCCCC
GEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTAN
HHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
IKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE
CCCCCEEEEEEEHHEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHCCCC
TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQG
CEEEEEHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCCEEEECCCCCCCC
KANSMKFLQENTTISAELEGKLRELLLSHAAATDAERAGAEREDNAAADDENF
CCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA