| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is recX [H]
Identifier: 238921101
GI number: 238921101
Start: 3113098
End: 3113538
Strand: Reverse
Name: recX [H]
Synonym: NT01EI_3240
Alternate gene names: 238921101
Gene position: 3113538-3113098 (Counterclockwise)
Preceding gene: 238921102
Following gene: 238921100
Centisome position: 81.67
GC content: 61.9
Gene sequence:
>441_bases GTGAGCGACGCGCTTAACCGGGCCATGCGTCTGCTGGCCCAGCGAGACCACAGCGAGAATGAACTGCGCCGCAAACTTGC GGCGCAGGGCGTTTCTGAGGGGGAGATAGCGTTAACTATTGCCCACTGCCAGCGCTATCAGTGGCTGGATGATGCCCGCT TTGCCCAGTGCTATATCGAGTCCCGCAGCCGTAAAGGCTATGGCGCGCAGCGTATTCGTCAGGAGTTGGGGGTGCGCGGC GTGGCGCGCGATCTCATCCAGCAGGCGCTGGCCGGGTGTGAGATCGACTGGAGCGCACAGGCGCGCCGCACGCTGGAGCG CCACTTTTCCCTACCGCTCTCTTCTGATTGGGCTACCCGGGCCAAAGTGCAGCGCTATCTGCTGTATCGCGGCTTCTTTT CGGAGGAGATCCAGGATGCCCTGCGTGATTTAACTTCGTGA
Upstream 100 bases:
>100_bases CGACGCCGAGCGGGCGGGTGCCGAACGCGAAGACAACGCGGCGGCGGATGATGAAAACTTCTAATTCTGGCGGCCATGGG GACGGCGCGGCGAGGTCTGC
Downstream 100 bases:
>100_bases ACGCACGCGGCGTTTTACTTCGGTGAGAAGAAATTTTATCTTAGTGTCACTTTGTGTTCGTGAGCGGGCGTCGGCAGCGG AATGCGGGCTGTTTTGTTCA
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSDALNRAMRLLAQRDHSENELRRKLAAQGVSEGEIALTIAHCQRYQWLDDARFAQCYIESRSRKGYGAQRIRQELGVRG VARDLIQQALAGCEIDWSAQARRTLERHFSLPLSSDWATRAKVQRYLLYRGFFSEEIQDALRDLTS
Sequences:
>Translated_146_residues MSDALNRAMRLLAQRDHSENELRRKLAAQGVSEGEIALTIAHCQRYQWLDDARFAQCYIESRSRKGYGAQRIRQELGVRG VARDLIQQALAGCEIDWSAQARRTLERHFSLPLSSDWATRAKVQRYLLYRGFFSEEIQDALRDLTS >Mature_145_residues SDALNRAMRLLAQRDHSENELRRKLAAQGVSEGEIALTIAHCQRYQWLDDARFAQCYIESRSRKGYGAQRIRQELGVRGV ARDLIQQALAGCEIDWSAQARRTLERHFSLPLSSDWATRAKVQRYLLYRGFFSEEIQDALRDLTS
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=150, Percent_Identity=46.6666666666667, Blast_Score=131, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 16873; Mature: 16742
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDALNRAMRLLAQRDHSENELRRKLAAQGVSEGEIALTIAHCQRYQWLDDARFAQCYIE CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH SRSRKGYGAQRIRQELGVRGVARDLIQQALAGCEIDWSAQARRTLERHFSLPLSSDWATR HHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHH AKVQRYLLYRGFFSEEIQDALRDLTS HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDALNRAMRLLAQRDHSENELRRKLAAQGVSEGEIALTIAHCQRYQWLDDARFAQCYIE CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH SRSRKGYGAQRIRQELGVRGVARDLIQQALAGCEIDWSAQARRTLERHFSLPLSSDWATR HHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHH AKVQRYLLYRGFFSEEIQDALRDLTS HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA