| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921081
Identifier: 238921081
GI number: 238921081
Start: 3094637
End: 3094783
Strand: Reverse
Name: 238921081
Synonym: NT01EI_3216
Alternate gene names: NA
Gene position: 3094783-3094637 (Counterclockwise)
Preceding gene: 238921085
Following gene: 238921078
Centisome position: 81.18
GC content: 32.65
Gene sequence:
>147_bases ATGACAGCGAAAATCGTATACAGCGTAATGCTGCGTAATAATATTTTTGGTCTGCACATGATTCTGAGAGATTGCTCTTC CTTTATAAAAATACAGAATATAAATCCAATGAAAAGTGATCTGAATAAACTATTGTGGACAAAGTGA
Upstream 100 bases:
>100_bases TAGACAGATTATTATAACGGCAAATTGTAGTGTGACCATATGTTCCCTTTGTGTTTATTTTCCCACGCCGTGCCTCATGG TATAAGGGCGTCGGGTATTC
Downstream 100 bases:
>100_bases AAACGGAGGAGAACCAGAGAGGCACATAGAATTTCTAACACTCCCTAAGGTAAATCCGTTTATCTCCATGTCGTCAGCAT AAAGGCATCACCGGTTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MTAKIVYSVMLRNNIFGLHMILRDCSSFIKIQNINPMKSDLNKLLWTK
Sequences:
>Translated_48_residues MTAKIVYSVMLRNNIFGLHMILRDCSSFIKIQNINPMKSDLNKLLWTK >Mature_47_residues TAKIVYSVMLRNNIFGLHMILRDCSSFIKIQNINPMKSDLNKLLWTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5641; Mature: 5510
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKIVYSVMLRNNIFGLHMILRDCSSFIKIQNINPMKSDLNKLLWTK CCHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCC >Mature Secondary Structure TAKIVYSVMLRNNIFGLHMILRDCSSFIKIQNINPMKSDLNKLLWTK CHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA