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The map label for this gene is aroF [H]

Identifier: 238921078

GI number: 238921078

Start: 3091734

End: 3092804

Strand: Reverse

Name: aroF [H]

Synonym: NT01EI_3213

Alternate gene names: 238921078

Gene position: 3092804-3091734 (Counterclockwise)

Preceding gene: 238921081

Following gene: 238921077

Centisome position: 81.13

GC content: 58.26

Gene sequence:

>1071_bases
ATGCAAAAAGACGCCGTGAATAACATCCATATCAGCGATGAGCAGGTTTTGATTACGCCAGAGGAGCTAAAGGCCCGTTT
CCCGCTGACCGAGGCTCAGCAGGCGAAAATCGCTGCCTCCCGCCGTGAGATAGCTGATATTCTGGCCGGGCGTGACTCGC
GTCTGCTGGTGATCTGCGGTCCCTGCTCGATCCATGATGTCGATGCCGCCCTTACGTATGGCCGTCATCTGCAGTCGCTG
GCGCAGAGTGTCGGCGATCGGCTCTACGTTGTCATGCGGGTCTATTTTGAGAAGCCGCGCACCACGGTGGGTTGGAAAGG
GTTAATTAACGATCCCTATATGGATGGCTCTTTCGATGTTGAGGCCGGGCTGCATATTGCCCGTCGCCTGCTGCTGCAGC
TGGTCGATATAGGGTTACCGTTGGCGACTGAGGCGCTGGATCCCAACTCACCGCAATACTTGGGCGATCTGTTCAGCTGG
TCGGCCATAGGCGCGCGTACCACCGAGTCACAAACCCATCGCGAGATGGCCTCCGGTCTGTCGATGCCGGTCGGCTTTAA
AAACGGTACCGACGGCAGCATGGAGACAGCGATTAATGCGATGAAGGCGGCGGCCATGCCACACCGCTTCGTCGGTATCA
ATCAGGCTGGGCAGGTTTGCCTGTTGCAGACACAGGGAAACCCCGATGGCCATGTTATTCTGCGTGGGGGGCGAATGCCA
AACTACAGCGCACAGGATGTCGCGCAGTGCGAGGCGCAGATGGTACAGGCCGGTCTGCGCCCGCTGTTGATGGTCGACTG
CAGTCACGGTAATTCTTGCAAGGACTACCGACGTCAGCCGCAGGTCGCGCAGTCGGTTATTACGCAGATAGTAGAGGGGA
ACCGCTCCATTATCGGTGTGATGCTGGAGAGTAACCTGGCCGCTGGCAATCAGAGTTCGGAGCAGCCACGCAGCGACATG
CGCTATGGCGTCTCTGTGACGGATGGTTGTATTGACTGGACGACAACGGAAACGTTGCTGCACGATATGCAGCGTCAATT
GGCGCCGCTGCGGCGCGATCGGGAGGCATGA

Upstream 100 bases:

>100_bases
TGGATTGAAAAGTTTACTGTTCGTGCTAATGTAGCCTAGATAGAGGCATGGTACCCGCGCCGAGATAATTACTCCCTGAT
AGGCAGGTAATGTGATGATG

Downstream 100 bases:

>100_bases
CGGACGATGGTGGCGGAACTGAGCGCACTGCGCGATAGCATTGATGAGGTCGATAAGGCGTTGCTGGGGCTGTTGGCACG
CCGTTTACAGTTGGTTGCCC

Product: phospho-2-dehydro-3-deoxyheptonate aldolase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MQKDAVNNIHISDEQVLITPEELKARFPLTEAQQAKIAASRREIADILAGRDSRLLVICGPCSIHDVDAALTYGRHLQSL
AQSVGDRLYVVMRVYFEKPRTTVGWKGLINDPYMDGSFDVEAGLHIARRLLLQLVDIGLPLATEALDPNSPQYLGDLFSW
SAIGARTTESQTHREMASGLSMPVGFKNGTDGSMETAINAMKAAAMPHRFVGINQAGQVCLLQTQGNPDGHVILRGGRMP
NYSAQDVAQCEAQMVQAGLRPLLMVDCSHGNSCKDYRRQPQVAQSVITQIVEGNRSIIGVMLESNLAAGNQSSEQPRSDM
RYGVSVTDGCIDWTTTETLLHDMQRQLAPLRRDREA

Sequences:

>Translated_356_residues
MQKDAVNNIHISDEQVLITPEELKARFPLTEAQQAKIAASRREIADILAGRDSRLLVICGPCSIHDVDAALTYGRHLQSL
AQSVGDRLYVVMRVYFEKPRTTVGWKGLINDPYMDGSFDVEAGLHIARRLLLQLVDIGLPLATEALDPNSPQYLGDLFSW
SAIGARTTESQTHREMASGLSMPVGFKNGTDGSMETAINAMKAAAMPHRFVGINQAGQVCLLQTQGNPDGHVILRGGRMP
NYSAQDVAQCEAQMVQAGLRPLLMVDCSHGNSCKDYRRQPQVAQSVITQIVEGNRSIIGVMLESNLAAGNQSSEQPRSDM
RYGVSVTDGCIDWTTTETLLHDMQRQLAPLRRDREA
>Mature_356_residues
MQKDAVNNIHISDEQVLITPEELKARFPLTEAQQAKIAASRREIADILAGRDSRLLVICGPCSIHDVDAALTYGRHLQSL
AQSVGDRLYVVMRVYFEKPRTTVGWKGLINDPYMDGSFDVEAGLHIARRLLLQLVDIGLPLATEALDPNSPQYLGDLFSW
SAIGARTTESQTHREMASGLSMPVGFKNGTDGSMETAINAMKAAAMPHRFVGINQAGQVCLLQTQGNPDGHVILRGGRMP
NYSAQDVAQCEAQMVQAGLRPLLMVDCSHGNSCKDYRRQPQVAQSVITQIVEGNRSIIGVMLESNLAAGNQSSEQPRSDM
RYGVSVTDGCIDWTTTETLLHDMQRQLAPLRRDREA

Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]

COG id: COG0722

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I DAHP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788953, Length=347, Percent_Identity=77.8097982708934, Blast_Score=581, Evalue=1e-167,
Organism=Escherichia coli, GI1786969, Length=348, Percent_Identity=52.2988505747126, Blast_Score=360, Evalue=1e-101,
Organism=Escherichia coli, GI1787996, Length=331, Percent_Identity=50.7552870090634, Blast_Score=335, Evalue=3e-93,
Organism=Saccharomyces cerevisiae, GI6319726, Length=340, Percent_Identity=50.2941176470588, Blast_Score=336, Evalue=4e-93,
Organism=Saccharomyces cerevisiae, GI6320240, Length=332, Percent_Identity=47.5903614457831, Blast_Score=330, Evalue=2e-91,

Paralogues:

None

Copy number: 2,200 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006218
- InterPro:   IPR006219 [H]

Pfam domain/function: PF00793 DAHP_synth_1 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 39070; Mature: 39070

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDAVNNIHISDEQVLITPEELKARFPLTEAQQAKIAASRREIADILAGRDSRLLVICG
CCCCCCCCEEECCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PCSIHDVDAALTYGRHLQSLAQSVGDRLYVVMRVYFEKPRTTVGWKGLINDPYMDGSFDV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
EAGLHIARRLLLQLVDIGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL
HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
SMPVGFKNGTDGSMETAINAMKAAAMPHRFVGINQAGQVCLLQTQGNPDGHVILRGGRMP
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCCCCCEEEEEECCCCCCEEEEECCCCC
NYSAQDVAQCEAQMVQAGLRPLLMVDCSHGNSCKDYRRQPQVAQSVITQIVEGNRSIIGV
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEE
MLESNLAAGNQSSEQPRSDMRYGVSVTDGCIDWTTTETLLHDMQRQLAPLRRDREA
EEECCCCCCCCCCCCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKDAVNNIHISDEQVLITPEELKARFPLTEAQQAKIAASRREIADILAGRDSRLLVICG
CCCCCCCCEEECCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PCSIHDVDAALTYGRHLQSLAQSVGDRLYVVMRVYFEKPRTTVGWKGLINDPYMDGSFDV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
EAGLHIARRLLLQLVDIGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL
HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
SMPVGFKNGTDGSMETAINAMKAAAMPHRFVGINQAGQVCLLQTQGNPDGHVILRGGRMP
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCCCCCEEEEEECCCCCCEEEEECCCCC
NYSAQDVAQCEAQMVQAGLRPLLMVDCSHGNSCKDYRRQPQVAQSVITQIVEGNRSIIGV
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEE
MLESNLAAGNQSSEQPRSDMRYGVSVTDGCIDWTTTETLLHDMQRQLAPLRRDREA
EEECCCCCCCCCCCCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6146618; 6396419; 9205837; 9278503; 1977738; 6104668; 2857723; 9056491 [H]