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The map label for this gene is yafS [H]

Identifier: 238921064

GI number: 238921064

Start: 3072026

End: 3072730

Strand: Reverse

Name: yafS [H]

Synonym: NT01EI_3195

Alternate gene names: 238921064

Gene position: 3072730-3072026 (Counterclockwise)

Preceding gene: 238921068

Following gene: 238921062

Centisome position: 80.6

GC content: 60.71

Gene sequence:

>705_bases
ATGCGCACGCTAAACGCGCCTTTTACCTGGCGGCAAATCCCGTGGGGACTCCACTACCGGGCCGCGCTGGAGCTGCGTTT
AACGCCGTGGTGGCCAAAGCTGTTTGGCTACCATTTGCTGAAGCTGGGGACGCTGAGCACCGATCTGGCAACGGACCGCT
GTACCATATCACATCAGGTGAGTGTGGCACCGGAGGGAGAGCATTTACAGGTGATCGCTGAGCCCGCGCATCTGCCGTTT
GCCGCGAAGTCGGTGGATGCCTGCCTGCTGGCTCACACCCTGGGCTACTCCCACGATCCGCACCGGGTGCTGCGCGAGGT
CGATCGGGTACTGGTGGATGACGGTTGGCTTATCATCAGCGGCTTTAGTCCGCTGAGCCTTCTGGGGATGGGGAAACTGG
TGCCCGGACTGCGCCGCCGGCTGCCCTACAGCAGCCGTATGTTCAGTATGGGGCGACTCATCGACTGGCTGAACCTGCTG
AACTACGAAGTGCTGGCGGCGTCACGTTTTCAAGTGTTGCCTTGGCATAATCCCTGCGTCTCTCTGCTGAGCCGACACTT
TCCGGCGATGGGGTGTCTGATGCTGATCGTTGCACGTAAGCGTACCGTTCCATTGACCTTAACGCCGCAACGCGTCTTGC
TGGCGCATCATAGTATCCGCCGCGCGTTGGGTAGCGCGGCAAAGATCAGACGGCGGCCGGTTTAG

Upstream 100 bases:

>100_bases
TAGCAGCCAGATGTAGTTATCCTGTAGGGTAGGAAGACCGATAAGATCCATGATGTTATCTACTCCAAAGTCAGAGGTGA
CGATGAGACCGGCACTGAGC

Downstream 100 bases:

>100_bases
CGGCCCCGGTGGCGTGGCTACCCGGGAGTGTAGCCGCTGTCGTCCTGGGTCGGTGTCCCGGCGGCGCGGCGCGCCAGCTC
ATCGCAGCGCTCGTTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRTLNAPFTWRQIPWGLHYRAALELRLTPWWPKLFGYHLLKLGTLSTDLATDRCTISHQVSVAPEGEHLQVIAEPAHLPF
AAKSVDACLLAHTLGYSHDPHRVLREVDRVLVDDGWLIISGFSPLSLLGMGKLVPGLRRRLPYSSRMFSMGRLIDWLNLL
NYEVLAASRFQVLPWHNPCVSLLSRHFPAMGCLMLIVARKRTVPLTLTPQRVLLAHHSIRRALGSAAKIRRRPV

Sequences:

>Translated_234_residues
MRTLNAPFTWRQIPWGLHYRAALELRLTPWWPKLFGYHLLKLGTLSTDLATDRCTISHQVSVAPEGEHLQVIAEPAHLPF
AAKSVDACLLAHTLGYSHDPHRVLREVDRVLVDDGWLIISGFSPLSLLGMGKLVPGLRRRLPYSSRMFSMGRLIDWLNLL
NYEVLAASRFQVLPWHNPCVSLLSRHFPAMGCLMLIVARKRTVPLTLTPQRVLLAHHSIRRALGSAAKIRRRPV
>Mature_234_residues
MRTLNAPFTWRQIPWGLHYRAALELRLTPWWPKLFGYHLLKLGTLSTDLATDRCTISHQVSVAPEGEHLQVIAEPAHLPF
AAKSVDACLLAHTLGYSHDPHRVLREVDRVLVDDGWLIISGFSPLSLLGMGKLVPGLRRRLPYSSRMFSMGRLIDWLNLL
NYEVLAASRFQVLPWHNPCVSLLSRHFPAMGCLMLIVARKRTVPLTLTPQRVLLAHHSIRRALGSAAKIRRRPV

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=230, Percent_Identity=56.5217391304348, Blast_Score=275, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26547; Mature: 26547

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLNAPFTWRQIPWGLHYRAALELRLTPWWPKLFGYHLLKLGTLSTDLATDRCTISHQV
CCCCCCCCCHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
SVAPEGEHLQVIAEPAHLPFAAKSVDACLLAHTLGYSHDPHRVLREVDRVLVDDGWLIIS
EECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEE
GFSPLSLLGMGKLVPGLRRRLPYSSRMFSMGRLIDWLNLLNYEVLAASRFQVLPWHNPCV
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCHHH
SLLSRHFPAMGCLMLIVARKRTVPLTLTPQRVLLAHHSIRRALGSAAKIRRRPV
HHHHHCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTLNAPFTWRQIPWGLHYRAALELRLTPWWPKLFGYHLLKLGTLSTDLATDRCTISHQV
CCCCCCCCCHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
SVAPEGEHLQVIAEPAHLPFAAKSVDACLLAHTLGYSHDPHRVLREVDRVLVDDGWLIIS
EECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEE
GFSPLSLLGMGKLVPGLRRRLPYSSRMFSMGRLIDWLNLLNYEVLAASRFQVLPWHNPCV
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCHHH
SLLSRHFPAMGCLMLIVARKRTVPLTLTPQRVLLAHHSIRRALGSAAKIRRRPV
HHHHHCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]