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The map label for this gene is sseB [H]

Identifier: 238921045

GI number: 238921045

Start: 3056507

End: 3057367

Strand: Reverse

Name: sseB [H]

Synonym: NT01EI_3175

Alternate gene names: 238921045

Gene position: 3057367-3056507 (Counterclockwise)

Preceding gene: 238921046

Following gene: 238921043

Centisome position: 80.2

GC content: 65.16

Gene sequence:

>861_bases
GTGAGTACCAGTACCCGCGATACCCCCCCCGATCACGATGATCGTCAGCATGAGCACGATCACCATCACGAAACCCCCGA
ACAGCGGCTCGAATCCAGCCTGGTTCAGGCGGCGGCCGAACCGGCCTATCTGGCGCTGTTTTACCGTGCGCTGCTGTCGT
CGACGGTCTATCTTCCGGCCCGGAGAGAGGAGATAGCGGAGGCGGACGGCGATACGCTGGCGATCGAACACTGGGAAATG
GAGGATGGCACGCGGGTGATCCCCTTTTTCTCTACGCCGGCGCGTCTGCAGCAGGCGCTGACGGATGATGGTCCCACGTC
TTGGCACGCACTTCCGGTCCGTGAGTTGTTCGCCCTGACCCGCGGTGAGACGCTGTTTTTAAATCCCCGCACGGAGGCGG
GCAAGGCCTTCTACCCGCCGGAGGTGGCGATGCTGCTGGAGAGCGGTGGCATGGCTCACCCACAGACGCTGTCGATCGAT
GGCGGCGCCGCGATCCGTATCGGACCGGCGGAGCAGACGCCGGAGGCCCTGCAAAGTGGACTGGTCACCCTGTGTGGTCA
GCGTAACCTGGTGCGGAGTGCCTGGCTGGCGCGTTTTCAGGATCTGGCCTGCGATGCGCAGCCGGTGCTGCTGCTGGCGC
TGGAGCTGGAGGGAAGCGATGAAGCCGCGCATCAGGCGCTGATCCGCGAGGCGGGCACCTTGGCCAGCGCTTTGCTGGAT
CTGGAGGAGACGATCGACGTCTGCTGCCTTCGCCGTGATGCGCAGGATCCGCTGGCTGACTATCTGCGCACCCACGTGAC
GCCGCTGTATCAGCGCCGCTGGGGCGGCTGGCTGCGCAATGCCATCGCGACGGGGCATTAG

Upstream 100 bases:

>100_bases
TTGTTGACACAGGCTGGGCGCTGCTGACGTTGGCATCATGGTTCCGCCGAATGGCGGAGCCTGCATCGGTCAAGGAAACA
CGGAAATAGGAGAGATGACG

Downstream 100 bases:

>100_bases
CCCGCCAAATCCTTATCCTGCCTACCGCTGGTGGGGTTCCCTGCAGTATGTATTAAAATATTCATATTTTTTTAACAAAT
TAACGCAACTGCCATAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSTSTRDTPPDHDDRQHEHDHHHETPEQRLESSLVQAAAEPAYLALFYRALLSSTVYLPARREEIAEADGDTLAIEHWEM
EDGTRVIPFFSTPARLQQALTDDGPTSWHALPVRELFALTRGETLFLNPRTEAGKAFYPPEVAMLLESGGMAHPQTLSID
GGAAIRIGPAEQTPEALQSGLVTLCGQRNLVRSAWLARFQDLACDAQPVLLLALELEGSDEAAHQALIREAGTLASALLD
LEETIDVCCLRRDAQDPLADYLRTHVTPLYQRRWGGWLRNAIATGH

Sequences:

>Translated_286_residues
MSTSTRDTPPDHDDRQHEHDHHHETPEQRLESSLVQAAAEPAYLALFYRALLSSTVYLPARREEIAEADGDTLAIEHWEM
EDGTRVIPFFSTPARLQQALTDDGPTSWHALPVRELFALTRGETLFLNPRTEAGKAFYPPEVAMLLESGGMAHPQTLSID
GGAAIRIGPAEQTPEALQSGLVTLCGQRNLVRSAWLARFQDLACDAQPVLLLALELEGSDEAAHQALIREAGTLASALLD
LEETIDVCCLRRDAQDPLADYLRTHVTPLYQRRWGGWLRNAIATGH
>Mature_285_residues
STSTRDTPPDHDDRQHEHDHHHETPEQRLESSLVQAAAEPAYLALFYRALLSSTVYLPARREEIAEADGDTLAIEHWEME
DGTRVIPFFSTPARLQQALTDDGPTSWHALPVRELFALTRGETLFLNPRTEAGKAFYPPEVAMLLESGGMAHPQTLSIDG
GAAIRIGPAEQTPEALQSGLVTLCGQRNLVRSAWLARFQDLACDAQPVLLLALELEGSDEAAHQALIREAGTLASALLDL
EETIDVCCLRRDAQDPLADYLRTHVTPLYQRRWGGWLRNAIATGH

Specific function: May be involved in the enhancement of serine- sensitivity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082122, Length=257, Percent_Identity=35.7976653696498, Blast_Score=157, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009839 [H]

Pfam domain/function: PF07179 SseB [H]

EC number: NA

Molecular weight: Translated: 31641; Mature: 31510

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSTRDTPPDHDDRQHEHDHHHETPEQRLESSLVQAAAEPAYLALFYRALLSSTVYLPA
CCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH
RREEIAEADGDTLAIEHWEMEDGTRVIPFFSTPARLQQALTDDGPTSWHALPVRELFALT
HHHHHHHCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RGETLFLNPRTEAGKAFYPPEVAMLLESGGMAHPQTLSIDGGAAIRIGPAEQTPEALQSG
CCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHH
LVTLCGQRNLVRSAWLARFQDLACDAQPVLLLALELEGSDEAAHQALIREAGTLASALLD
HHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LEETIDVCCLRRDAQDPLADYLRTHVTPLYQRRWGGWLRNAIATGH
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSTRDTPPDHDDRQHEHDHHHETPEQRLESSLVQAAAEPAYLALFYRALLSSTVYLPA
CCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH
RREEIAEADGDTLAIEHWEMEDGTRVIPFFSTPARLQQALTDDGPTSWHALPVRELFALT
HHHHHHHCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RGETLFLNPRTEAGKAFYPPEVAMLLESGGMAHPQTLSIDGGAAIRIGPAEQTPEALQSG
CCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHH
LVTLCGQRNLVRSAWLARFQDLACDAQPVLLLALELEGSDEAAHQALIREAGTLASALLD
HHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LEETIDVCCLRRDAQDPLADYLRTHVTPLYQRRWGGWLRNAIATGH
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7982894; 9205837; 9278503 [H]