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The map label for this gene is rnfH [H]

Identifier: 238920938

GI number: 238920938

Start: 2960983

End: 2961258

Strand: Reverse

Name: rnfH [H]

Synonym: NT01EI_3066

Alternate gene names: 238920938

Gene position: 2961258-2960983 (Counterclockwise)

Preceding gene: 238920939

Following gene: 238920934

Centisome position: 77.68

GC content: 61.59

Gene sequence:

>276_bases
ATGAGCATCGAGGTGGTGTACGCACTGCCGGAAAAACAGTATCTGCATCGCCTGACTCTGCCGCAGGGCAGCAGCGTTGG
GCAGGCTATTGAGCGCTCCGGGCTGCTGGCGCAGCGCAGCGAGATCGATCTGGGTAAGAATAAGGTGGGGGTTTTCAGTC
GCCCGGTGCGTCTGGAGGATCCGCTGCGTGACGGAGACCGGGTGGAGATCTATCGCCCTCTGATCGCCGATCCGCGTGAG
TTGCGGCGCCAGCGCGCTGAGCGGGCAAAAAAATAA

Upstream 100 bases:

>100_bases
AAGCTGGTTGAGCTGGCCTTTGGCAAGATATTTAAGGAGTTGGCTGGCAGTATGGTGCAGGCGTTTACCCTGCGGGCTAA
AGAGGTTTACCGTGTCTGAG

Downstream 100 bases:

>100_bases
GGCGCTATGGGCGCCTTATTTTTACTGCCGTTAATACTTATGCGTTGCTGCCATCCGGCAGTTTCTTGGTGTTTTCAATG
TTGGTCAGCACACCGCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSIEVVYALPEKQYLHRLTLPQGSSVGQAIERSGLLAQRSEIDLGKNKVGVFSRPVRLEDPLRDGDRVEIYRPLIADPRE
LRRQRAERAKK

Sequences:

>Translated_91_residues
MSIEVVYALPEKQYLHRLTLPQGSSVGQAIERSGLLAQRSEIDLGKNKVGVFSRPVRLEDPLRDGDRVEIYRPLIADPRE
LRRQRAERAKK
>Mature_90_residues
SIEVVYALPEKQYLHRLTLPQGSSVGQAIERSGLLAQRSEIDLGKNKVGVFSRPVRLEDPLRDGDRVEIYRPLIADPREL
RRQRAERAKK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=89, Percent_Identity=66.2921348314607, Blast_Score=127, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 10437; Mature: 10306

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEVVYALPEKQYLHRLTLPQGSSVGQAIERSGLLAQRSEIDLGKNKVGVFSRPVRLED
CCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLRDGDRVEIYRPLIADPRELRRQRAERAKK
CCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIEVVYALPEKQYLHRLTLPQGSSVGQAIERSGLLAQRSEIDLGKNKVGVFSRPVRLED
CEEEEEECCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLRDGDRVEIYRPLIADPRELRRQRAERAKK
CCCCCCEEEEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA