| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is nagE [H]
Identifier: 238920788
GI number: 238920788
Start: 2799511
End: 2801526
Strand: Reverse
Name: nagE [H]
Synonym: NT01EI_2907
Alternate gene names: 238920788
Gene position: 2801526-2799511 (Counterclockwise)
Preceding gene: 238920792
Following gene: 238920787
Centisome position: 73.49
GC content: 58.28
Gene sequence:
>2016_bases GTGAGTATTCTCGGTTATTTGCAAAAGGTAGGCCGCGCGCTGATGGTGCCGGTAGCGACGCTACCGGCCGCAGCAATACT GATGGGTGTCGGTTACTGGATCGACCCGGTCGGCTGGGGGGGAGATAACGCACTGGCGGCGTTCTTCATCAAGTCCGGTT CAGCCATCATCGACAATATGTCGGTGCTGTTTGCCATTGGTGTTGCATATGGTATGTCCAAAGATAAAGACGGCGCGGCG GCACTGGCCGGTTTTGTCGGGTTCCTGGTGGTTACAACCCTGTGTTCGCCGGCTGCGGTGGCGATGATCCAGAAGATTCC GGTGGATCAGGTTCCTGCCGCCTTCGGTAAGATCAATAACCAGTTTATCGGTATTCTGGTCGGTATTATCTCCGCTGAGT TGTATAACCGTTACAGCAGCGTTGAGCTGCCCAAGGCGCTCTCCTTCTTCAGCGGCCGTCGTCTGGTACCGATCCTGACC TCGTTCCTGATGATTATTCTGGCCTTTATCCTGATGTATATCTGGCCGGTAATCTTTAATGGCCTGGTGAACTTCGGTGA GCATATCCAGAAGCTGGGCTCCGTGGGGGCGGGCGTGTATGCCTTCTTCAACCGTCTGTTGATCCCGGTCGGTCTGCACC ATGCCCTGAACTCCGTGTTCTGGTTTGACGTCGCCGGCATTAACGATATTCCGAACTTCCTGGGCGGCGCTCAGTCCATT GAGAGTGGCAAGGCGGTGGTCGGCATCACCGGTCGCTATCAGGCCGGTTTCTTCCCGATCATGATGTTCGGTCTGCCGGG TGCGGCGCTGGCCATCTATCACTGCGCCCGTCCGGAAAATAGGGCTAAGGTCGCCGGTATCATGCTGGCAGCGGCATTTG CCTCCTTCTTTACCGGGATCACCGAGCCGCTGGAGTTCTCCTTCATGTTCGTGGCGCCGGTGCTGTATGTGCTGCATGCC ATTCTGACCGGTATCTCTGTATTTATTGCGGCCAGCATGCACTGGATCTCCGGCTTCGGCTTCAGCGCCGGTCTGGTGGA TATGGTGTTGCAGTCACGTAACCCGCTGGCGACACACTGGTACATGCTGATCCCGCAGGGGCTGGTGTTCTTTGTTATCT ACTACGTGGTGTTCCGCTTCACTATCACCAAATTCAACCTGATGACGCCGGGGCGTGAGTTGAGCGGCGCGGGTGAAGAG GCTGATGGCAACGATGAGGATCTGGATCTGACCAAAGAAGCGGATGTCAGCGAGCTGGCCCGTCAGTATATCGCCTGCGT CGGTGGCTCCGCCAACCTGACCGGTATCGATGCCTGTATCACCCGACTGCGTCTGACGGTGAAGGACTCTTCGCTGGTCA ATGAAGCGATGGCTAAGAGGCTGGGCGCTTCCGGCGTAATCCGCCTGAACAAGACCAGCGTCCAGATCATCGTTGGCTTC GTGGCCGAGAAGATCGCCAATGCAATGCGTACGGCGGGCACGGTACCTGCTGCGGCGGCGAGCTCCGCTGCTCCGGCGGC AAAGGCCCAGGCGACGCCAAACGCCGCCGCGGGTGTCCACTCGACGCTGGTATCACCGATCACCGGTGAAGTGGTGGCCC TGAGCGAGGTGCCGGACGAGGCGTTTGCCAGTAAAGCCGTCGGCGACGGTCTGGCGGTGCGTCCGACGGATAAGATGGTT GTCGCACCGGCTAACGGCACCGTAGTGAAGATTTTCAACACCAATCACGCCTTCTGTCTGGAGAGTGATGACGGTGTGGA AGTGGTGGTGCACATGGGGATCGATACCGTGGCGCTGAACGGTCAGGGCTTTAAGCGCCTGGTGGAAGAGGGGGATGTGG TGAAGGTCGGCCAGCCGGTGCTGGAGCTGGATCTGGATTACCTGAACGCCCATGCGCGCTCCATGATAAGTCCGGTGGTA GTCAGCAATATCGATGACTTTGGCGGCGTGGGGGCGTTGGCTTCCGGTCAGGTGGTCGCCGGTCAGAGCAAGCTGTATAC CATTCTGAACAAGTAG
Upstream 100 bases:
>100_bases CTCCAGTGTGGTTCATATTATCAACAAAATACTTAAATCAGTGATGATGAGACCGTTAGTGCAGTGTGTATTTGCACTGT AGGTCCAAATAGGGGGAAAT
Downstream 100 bases:
>100_bases CGCCGCCGTTACACGACTGCGTCACGCGGCGGGGGGCCTGAAAGGGCTCCCCGTTTTTTATTGTCCGGATAAGGGGGAGG GGACGCGGCGCGGTTATCCG
Product: pts system, N-acetylglucosamine-specific iibc component
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGGDNALAAFFIKSGSAIIDNMSVLFAIGVAYGMSKDKDGAA ALAGFVGFLVVTTLCSPAAVAMIQKIPVDQVPAAFGKINNQFIGILVGIISAELYNRYSSVELPKALSFFSGRRLVPILT SFLMIILAFILMYIWPVIFNGLVNFGEHIQKLGSVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSI ESGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRAKVAGIMLAAAFASFFTGITEPLEFSFMFVAPVLYVLHA ILTGISVFIAASMHWISGFGFSAGLVDMVLQSRNPLATHWYMLIPQGLVFFVIYYVVFRFTITKFNLMTPGRELSGAGEE ADGNDEDLDLTKEADVSELARQYIACVGGSANLTGIDACITRLRLTVKDSSLVNEAMAKRLGASGVIRLNKTSVQIIVGF VAEKIANAMRTAGTVPAAAASSAAPAAKAQATPNAAAGVHSTLVSPITGEVVALSEVPDEAFASKAVGDGLAVRPTDKMV VAPANGTVVKIFNTNHAFCLESDDGVEVVVHMGIDTVALNGQGFKRLVEEGDVVKVGQPVLELDLDYLNAHARSMISPVV VSNIDDFGGVGALASGQVVAGQSKLYTILNK
Sequences:
>Translated_671_residues MSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGGDNALAAFFIKSGSAIIDNMSVLFAIGVAYGMSKDKDGAA ALAGFVGFLVVTTLCSPAAVAMIQKIPVDQVPAAFGKINNQFIGILVGIISAELYNRYSSVELPKALSFFSGRRLVPILT SFLMIILAFILMYIWPVIFNGLVNFGEHIQKLGSVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSI ESGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRAKVAGIMLAAAFASFFTGITEPLEFSFMFVAPVLYVLHA ILTGISVFIAASMHWISGFGFSAGLVDMVLQSRNPLATHWYMLIPQGLVFFVIYYVVFRFTITKFNLMTPGRELSGAGEE ADGNDEDLDLTKEADVSELARQYIACVGGSANLTGIDACITRLRLTVKDSSLVNEAMAKRLGASGVIRLNKTSVQIIVGF VAEKIANAMRTAGTVPAAAASSAAPAAKAQATPNAAAGVHSTLVSPITGEVVALSEVPDEAFASKAVGDGLAVRPTDKMV VAPANGTVVKIFNTNHAFCLESDDGVEVVVHMGIDTVALNGQGFKRLVEEGDVVKVGQPVLELDLDYLNAHARSMISPVV VSNIDDFGGVGALASGQVVAGQSKLYTILNK >Mature_670_residues SILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGGDNALAAFFIKSGSAIIDNMSVLFAIGVAYGMSKDKDGAAA LAGFVGFLVVTTLCSPAAVAMIQKIPVDQVPAAFGKINNQFIGILVGIISAELYNRYSSVELPKALSFFSGRRLVPILTS FLMIILAFILMYIWPVIFNGLVNFGEHIQKLGSVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSIE SGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRAKVAGIMLAAAFASFFTGITEPLEFSFMFVAPVLYVLHAI LTGISVFIAASMHWISGFGFSAGLVDMVLQSRNPLATHWYMLIPQGLVFFVIYYVVFRFTITKFNLMTPGRELSGAGEEA DGNDEDLDLTKEADVSELARQYIACVGGSANLTGIDACITRLRLTVKDSSLVNEAMAKRLGASGVIRLNKTSVQIIVGFV AEKIANAMRTAGTVPAAAASSAAPAAKAQATPNAAAGVHSTLVSPITGEVVALSEVPDEAFASKAVGDGLAVRPTDKMVV APANGTVVKIFNTNHAFCLESDDGVEVVVHMGIDTVALNGQGFKRLVEEGDVVKVGQPVLELDLDYLNAHARSMISPVVV SNIDDFGGVGALASGQVVAGQSKLYTILNK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=679, Percent_Identity=52.1354933726068, Blast_Score=595, Evalue=1e-171, Organism=Escherichia coli, GI1787343, Length=498, Percent_Identity=37.5502008032129, Blast_Score=302, Evalue=5e-83, Organism=Escherichia coli, GI1787908, Length=526, Percent_Identity=34.0304182509506, Blast_Score=275, Evalue=8e-75, Organism=Escherichia coli, GI1788757, Length=146, Percent_Identity=51.3698630136986, Blast_Score=155, Evalue=1e-38, Organism=Escherichia coli, GI1790159, Length=436, Percent_Identity=28.8990825688073, Blast_Score=116, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 70835; Mature: 70704
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGGDNALAAFFIKSGSAIIDNM CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH SVLFAIGVAYGMSKDKDGAAALAGFVGFLVVTTLCSPAAVAMIQKIPVDQVPAAFGKINN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC QFIGILVGIISAELYNRYSSVELPKALSFFSGRRLVPILTSFLMIILAFILMYIWPVIFN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLVNFGEHIQKLGSVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHH ESGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRAKVAGIMLAAAFASFFTGI CCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC TEPLEFSFMFVAPVLYVLHAILTGISVFIAASMHWISGFGFSAGLVDMVLQSRNPLATHW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH YMLIPQGLVFFVIYYVVFRFTITKFNLMTPGRELSGAGEEADGNDEDLDLTKEADVSELA HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RQYIACVGGSANLTGIDACITRLRLTVKDSSLVNEAMAKRLGASGVIRLNKTSVQIIVGF HHHHHHCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH VAEKIANAMRTAGTVPAAAASSAAPAAKAQATPNAAAGVHSTLVSPITGEVVALSEVPDE HHHHHHHHHHHCCCCCCHHCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCH AFASKAVGDGLAVRPTDKMVVAPANGTVVKIFNTNHAFCLESDDGVEVVVHMGIDTVALN HHHHHHCCCCEEECCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCEEEEC GQGFKRLVEEGDVVKVGQPVLELDLDYLNAHARSMISPVVVSNIDDFGGVGALASGQVVA CHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEE GQSKLYTILNK CCHHHHHCCCC >Mature Secondary Structure SILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGGDNALAAFFIKSGSAIIDNM CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH SVLFAIGVAYGMSKDKDGAAALAGFVGFLVVTTLCSPAAVAMIQKIPVDQVPAAFGKINN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC QFIGILVGIISAELYNRYSSVELPKALSFFSGRRLVPILTSFLMIILAFILMYIWPVIFN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLVNFGEHIQKLGSVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHH ESGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRAKVAGIMLAAAFASFFTGI CCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC TEPLEFSFMFVAPVLYVLHAILTGISVFIAASMHWISGFGFSAGLVDMVLQSRNPLATHW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH YMLIPQGLVFFVIYYVVFRFTITKFNLMTPGRELSGAGEEADGNDEDLDLTKEADVSELA HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RQYIACVGGSANLTGIDACITRLRLTVKDSSLVNEAMAKRLGASGVIRLNKTSVQIIVGF HHHHHHCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH VAEKIANAMRTAGTVPAAAASSAAPAAKAQATPNAAAGVHSTLVSPITGEVVALSEVPDE HHHHHHHHHHHCCCCCCHHCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCH AFASKAVGDGLAVRPTDKMVVAPANGTVVKIFNTNHAFCLESDDGVEVVVHMGIDTVALN HHHHHHCCCCEEECCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCEEEEC GQGFKRLVEEGDVVKVGQPVLELDLDYLNAHARSMISPVVVSNIDDFGGVGALASGQVVA CHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEE GQSKLYTILNK CCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3284790; 3056518; 8905232; 9278503 [H]