| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is kdpA
Identifier: 238920769
GI number: 238920769
Start: 2776216
End: 2777913
Strand: Direct
Name: kdpA
Synonym: NT01EI_2888
Alternate gene names: 238920769
Gene position: 2776216-2777913 (Clockwise)
Preceding gene: 238920762
Following gene: 238920770
Centisome position: 72.82
GC content: 61.72
Gene sequence:
>1698_bases ATGTTTGCCAATGCACTGATGCTCCTCGGTCTGCTGATACTGCTGTTGCTGATCCTGGCTCCGCTGCTGGGCAGCCTGCT GAGCCGTCTGATCGACGGCGAACCGTACCGCGCCATGGCGCGCACGGAAAATACCCTGTGGCGCCTGTGCGGCGTGACGC CTCACGAGATGGACTGGCGTCACTATCTGCTGGCCATCCTCGCCTTTAACCTGTTGGGCATTGTGCTGCTGTTCGCACTG CTGATGGCGCAGGGTCTACTGCCACTCAACCCCCAGGGCTTTCCCGGCCTGCGTTGGGATTTGGCTCTCAATACCGCCGT CAGCTTTGTCACCAATACCAACTGGCAGGCCTATAGCGGCGAAAGCAGCCTGAGCTACCTCAGCCAGATGGCCGGACTTG GCGTACAAAACTTTCTGTCGGCAGCCAGCGGCATCGCCGTGTTGTTTGCCCTGATCCGTGCTTTCGCCCGCCACGCCGAT CCATCTCTGGGCAACGCTTGGGTCGATCTGTGGCGCATCACCCTGTATGTCCTGCTACCGCTGTCGCTGCTGCTGAGCCT GCTCTTTGTCAGTCAGGGGGTGATCCAGAATGTTAGCGGCTATGTCAGCGTGACATCGCTGGAGGGGGGCTCCCAGCTGC TGCCGATGGGGCCGGTCGCCTCCCAGGAGGCCATCAAGCTGCTCGGCACCAACGGCGGCGGCTTTTTTGGCGCCAACTCC GCTCACCCATTTGAAAACCCGACCGCGCTGAGCAACCTACTGCAGATGGTGGCGATCTTTCTACTGCCGACCGCCCTGTG CTTCGCCTTCGGCCGCAGCGTCGGTGACAGCCGTCAGGGTCACGCACTGCTGTGGACCATGTCGCTGATCTTTATCGTTG CCGCGGGCTGTGTGATGTACGCCGAGCTGCAGGGTAACCCGCATCTAATGGCGCTGGGCACCGACAGCAACGGCAATATG GAGGGTAAGGAGAACCGCTTCGGTATCCTCGCATCCGCTCTGTATGCCGTTGTGACTACCGCCGCCTCCTGCGGCGCGGT CAACGCCATGCACGACTCCTTCACCGCCCTGGGCGGCATGGTGCCAATGTGGCTGATGCAGATAGGCGAGGTGGTCTTCG GCGGCGCGGGCAGCGGGCTCTATGGCATGTTACTGTTCGTCCTGCTCACCGTCTTCATCGCCGGGTTGATGATCGGCCGC ACCCCCGAATACCTGGGGAAAAAGATCACTGTCTTCGAGGTGAAGATGACCGCGCTGGCCATTCTGATCCCACCGGCCCT GGTGCTCACCGGCAGCGCCATTGCCCTGCTGTGTGACGCCGGACGCAGCGCGATCCACAATCCGGGCGCCCATGGATTCA GCGAGGTGCTGTACGCCTTCTCCTCCGCCGCCAACAACAACGGCAGCGCCTTCGGCGGCCTGAGCGTCAATACACCGTTT TACAACCTGCTGCTGGCGCTCGTCATGCTGATCGGCCGCTTCGGAGTGATCATCCCAGTAATGGCGATCGCTGGCGCCCT GGCGCTGAAAAAACGCCAACCGGCCGGTAACGGCACCCTGGCTAGCCATGGTGCGCTGTTTGTCAGCCTGCTGATCGGCA CCATCCTGCTGGTCGGAGCCTTAACCTTCATTCCGGCACTGGCTCTCGGGCCAGTAGCTGAACAGCTACAAAACACGCGG GCACATATCCAGCCGTAA
Upstream 100 bases:
>100_bases GGAGATAAAGAATGACACTGGGACTGATCGCCTGTGCCGTACTGGTGCTGCTCCTGTTGGTTTATCTGGTGTACGCACTG TGGCATGCGGAGGACTTCTG
Downstream 100 bases:
>100_bases GCGCAAGGCAATAGAGAGAATCATCATGAGTCACCAACAGCGAGCCCTGTTCGAACCTGCTCTGCTCAAGACCGCGCTAC GGGATGCCCTGCGCAAATTG
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MFANALMLLGLLILLLLILAPLLGSLLSRLIDGEPYRAMARTENTLWRLCGVTPHEMDWRHYLLAILAFNLLGIVLLFAL LMAQGLLPLNPQGFPGLRWDLALNTAVSFVTNTNWQAYSGESSLSYLSQMAGLGVQNFLSAASGIAVLFALIRAFARHAD PSLGNAWVDLWRITLYVLLPLSLLLSLLFVSQGVIQNVSGYVSVTSLEGGSQLLPMGPVASQEAIKLLGTNGGGFFGANS AHPFENPTALSNLLQMVAIFLLPTALCFAFGRSVGDSRQGHALLWTMSLIFIVAAGCVMYAELQGNPHLMALGTDSNGNM EGKENRFGILASALYAVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGAGSGLYGMLLFVLLTVFIAGLMIGR TPEYLGKKITVFEVKMTALAILIPPALVLTGSAIALLCDAGRSAIHNPGAHGFSEVLYAFSSAANNNGSAFGGLSVNTPF YNLLLALVMLIGRFGVIIPVMAIAGALALKKRQPAGNGTLASHGALFVSLLIGTILLVGALTFIPALALGPVAEQLQNTR AHIQP
Sequences:
>Translated_565_residues MFANALMLLGLLILLLLILAPLLGSLLSRLIDGEPYRAMARTENTLWRLCGVTPHEMDWRHYLLAILAFNLLGIVLLFAL LMAQGLLPLNPQGFPGLRWDLALNTAVSFVTNTNWQAYSGESSLSYLSQMAGLGVQNFLSAASGIAVLFALIRAFARHAD PSLGNAWVDLWRITLYVLLPLSLLLSLLFVSQGVIQNVSGYVSVTSLEGGSQLLPMGPVASQEAIKLLGTNGGGFFGANS AHPFENPTALSNLLQMVAIFLLPTALCFAFGRSVGDSRQGHALLWTMSLIFIVAAGCVMYAELQGNPHLMALGTDSNGNM EGKENRFGILASALYAVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGAGSGLYGMLLFVLLTVFIAGLMIGR TPEYLGKKITVFEVKMTALAILIPPALVLTGSAIALLCDAGRSAIHNPGAHGFSEVLYAFSSAANNNGSAFGGLSVNTPF YNLLLALVMLIGRFGVIIPVMAIAGALALKKRQPAGNGTLASHGALFVSLLIGTILLVGALTFIPALALGPVAEQLQNTR AHIQP >Mature_565_residues MFANALMLLGLLILLLLILAPLLGSLLSRLIDGEPYRAMARTENTLWRLCGVTPHEMDWRHYLLAILAFNLLGIVLLFAL LMAQGLLPLNPQGFPGLRWDLALNTAVSFVTNTNWQAYSGESSLSYLSQMAGLGVQNFLSAASGIAVLFALIRAFARHAD PSLGNAWVDLWRITLYVLLPLSLLLSLLFVSQGVIQNVSGYVSVTSLEGGSQLLPMGPVASQEAIKLLGTNGGGFFGANS AHPFENPTALSNLLQMVAIFLLPTALCFAFGRSVGDSRQGHALLWTMSLIFIVAAGCVMYAELQGNPHLMALGTDSNGNM EGKENRFGILASALYAVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGAGSGLYGMLLFVLLTVFIAGLMIGR TPEYLGKKITVFEVKMTALAILIPPALVLTGSAIALLCDAGRSAIHNPGAHGFSEVLYAFSSAANNNGSAFGGLSVNTPF YNLLLALVMLIGRFGVIIPVMAIAGALALKKRQPAGNGTLASHGALFVSLLIGTILLVGALTFIPALALGPVAEQLQNTR AHIQP
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family
Homologues:
Organism=Escherichia coli, GI1786915, Length=557, Percent_Identity=70.7360861759425, Blast_Score=788, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKA_EDWI9 (C5BG86)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002934284.1 - GeneID: 7960173 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2888 - OMA: MSYLTQM - ProtClustDB: PRK05482 - HAMAP: MF_00275 - InterPro: IPR004623 - PIRSF: PIRSF001294 - TIGRFAMs: TIGR00680
Pfam domain/function: PF03814 KdpA
EC number: =3.6.3.12
Molecular weight: Translated: 59596; Mature: 59596
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1e85f054)-; HASH(0x1f2886f0)-; HASH(0x1f263e58)-; HASH(0x1f060c68)-; HASH(0x1f263fe4)-; HASH(0x1d8fb010)-; HASH(0x1f288798)-; HASH(0x1f060d1c)-; HASH(0x1f2886fc)-; HASH(0x1eccd5a0)-; HASH(0x1e20b63c)-; HASH(0x1de7e8c0)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFANALMLLGLLILLLLILAPLLGSLLSRLIDGEPYRAMARTENTLWRLCGVTPHEMDWR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH HYLLAILAFNLLGIVLLFALLMAQGLLPLNPQGFPGLRWDLALNTAVSFVTNTNWQAYSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCEECC ESSLSYLSQMAGLGVQNFLSAASGIAVLFALIRAFARHADPSLGNAWVDLWRITLYVLLP CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LSLLLSLLFVSQGVIQNVSGYVSVTSLEGGSQLLPMGPVASQEAIKLLGTNGGGFFGANS HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC AHPFENPTALSNLLQMVAIFLLPTALCFAFGRSVGDSRQGHALLWTMSLIFIVAAGCVMY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHE AELQGNPHLMALGTDSNGNMEGKENRFGILASALYAVVTTAASCGAVNAMHDSFTALGGM EEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VPMWLMQIGEVVFGGAGSGLYGMLLFVLLTVFIAGLMIGRTPEYLGKKITVFEVKMTALA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEHHHHHHH ILIPPALVLTGSAIALLCDAGRSAIHNPGAHGFSEVLYAFSSAANNNGSAFGGLSVNTPF HHHCHHHHHHCCHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCHH YNLLLALVMLIGRFGVIIPVMAIAGALALKKRQPAGNGTLASHGALFVSLLIGTILLVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LTFIPALALGPVAEQLQNTRAHIQP HHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MFANALMLLGLLILLLLILAPLLGSLLSRLIDGEPYRAMARTENTLWRLCGVTPHEMDWR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH HYLLAILAFNLLGIVLLFALLMAQGLLPLNPQGFPGLRWDLALNTAVSFVTNTNWQAYSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCEECC ESSLSYLSQMAGLGVQNFLSAASGIAVLFALIRAFARHADPSLGNAWVDLWRITLYVLLP CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LSLLLSLLFVSQGVIQNVSGYVSVTSLEGGSQLLPMGPVASQEAIKLLGTNGGGFFGANS HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC AHPFENPTALSNLLQMVAIFLLPTALCFAFGRSVGDSRQGHALLWTMSLIFIVAAGCVMY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHE AELQGNPHLMALGTDSNGNMEGKENRFGILASALYAVVTTAASCGAVNAMHDSFTALGGM EEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VPMWLMQIGEVVFGGAGSGLYGMLLFVLLTVFIAGLMIGRTPEYLGKKITVFEVKMTALA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEHHHHHHH ILIPPALVLTGSAIALLCDAGRSAIHNPGAHGFSEVLYAFSSAANNNGSAFGGLSVNTPF HHHCHHHHHHCCHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCHH YNLLLALVMLIGRFGVIIPVMAIAGALALKKRQPAGNGTLASHGALFVSLLIGTILLVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LTFIPALALGPVAEQLQNTRAHIQP HHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA