| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920709
Identifier: 238920709
GI number: 238920709
Start: 2713779
End: 2714825
Strand: Direct
Name: 238920709
Synonym: NT01EI_2822
Alternate gene names: NA
Gene position: 2713779-2714825 (Clockwise)
Preceding gene: 238920708
Following gene: 238920718
Centisome position: 71.18
GC content: 64.37
Gene sequence:
>1047_bases ATGTTTTGCCCCGCCTTTTACCGTTATGATGCCCAGCCAGACTCTTTAACCACGAAGCACAACATCATGAACGCAATGCG TGACTGGCTGGAGCGCCGCCAGATTACTCTCTATTTTTCTGCAATCCTGCTGGCGGTACTGCTGGCCTGTACCTTTCCCG ACGGCGCACGTTTCAGCACCGCCATTACCCCCGCGCTGGCGCTGATGCTGTATGCCACCTTTTTGCAGCTGCCTTTCGCT GAACTGCGGCACGCCTTTAGCCGCCCACGGTTTCTGCTGCCGCTTCTCCTGACCCAGTTTCTGTTGATCCCGGCGCTGGT TGCCCTGCTGCTTCCCCTCCTGCCGCACGATCCCCTGTTGCGGCTCGGCGTGTTGCTGGTGCTGCTTTCGCCCTGCATCG ACTATGTGGTGACATTCGCCCAGCTCGGGCGTGCCGATGCGCGCCTGCTGCTCGCCGCGACACCGCTGCTGCTGCTGCTG CAAGTGTTGCTGCTCCCGCTCTATCTGCACCTGCTTCTCGGCGGGCAGGCGGCAAGCGTGGTCCGCCCGGCACCATTTAT TGAGGCGTTTATCGGATTAATCGTGCTGCCGCTGGGTCTGGCGGCGCTGACCCAGCGGGTATGCCGCCGCAGTCGCCGCG GGCAGGCCATTGCCGGGGGGCTCACGCTGTTGCCGGTACCGTCCACCGCCCTGGTCCTGGGGATCGTCGTCGCCACAACC CTGCCACAGCTCAGTGACGCAATCACGCTTATCTGGCGCGTGATACCGCTGTACCTGACATTCGCTGTCGCCGCACCGCT GACAGGCTGGACGGTGGCGAGGCTGTTCCGCCTTGAGGCGCCGGCCGGGCGCGCGCTCGCCTTCAGCGCGGCCACCCGTA ATTCGCTGGTGGTGCTGCCGCTGGCGCTCGCCGTCCCCGGCGCAACTCCGCTGCTTCCGGCCGTGATAGTGGCCCAGACG GTCGTCGAACTGGCGAGCGAGCTGATTTATATTCGGCTGATACCGCGCCTGGGTTCGCGGGGCAAAGAGGCGGGGAGACC GACCTGA
Upstream 100 bases:
>100_bases GATAGATTTCCGCCTGGTGCGCCATTAACGCCAACACATCCCCCTACGGCGGTGCGCCGGAAAACCGGCCCACCGCATCA TTACCCCTACGGTTCCCGGT
Downstream 100 bases:
>100_bases TACTCCACCCCGTTATCGGACGCTCTCCAGCGTGCCGATGGCCGTTACGATCGCGCGGCTATCCATCAGCGGGCGAATCT GACGGAACAGGGCATCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: SodiumBile Acid Symporter Family Protein; Efflux Protein; Arsenite Efflux Pump ACR3-Like Permease; Na+-Dependent Transporter; Efflux Pump; Efflux Protein Bile AcidSodium Symporter Family Protein; Bile AcidSodium Symporter Family Protein; Sodium Symporter; Sodium Bile Acid Symporter Family; Arsenite Efflux Pump; Bile Acid/Na+ Symporter Family Protein; Arsenical-Resistance; Transporter-Like Membrane Protein; Sodium-Dependent Transporter; ArsB-Like Efflux Protein; Arsenite Efflux Pump Or Related Permease; Arsenite Efflux Pump ACR3 And Related Permeases
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MFCPAFYRYDAQPDSLTTKHNIMNAMRDWLERRQITLYFSAILLAVLLACTFPDGARFSTAITPALALMLYATFLQLPFA ELRHAFSRPRFLLPLLLTQFLLIPALVALLLPLLPHDPLLRLGVLLVLLSPCIDYVVTFAQLGRADARLLLAATPLLLLL QVLLLPLYLHLLLGGQAASVVRPAPFIEAFIGLIVLPLGLAALTQRVCRRSRRGQAIAGGLTLLPVPSTALVLGIVVATT LPQLSDAITLIWRVIPLYLTFAVAAPLTGWTVARLFRLEAPAGRALAFSAATRNSLVVLPLALAVPGATPLLPAVIVAQT VVELASELIYIRLIPRLGSRGKEAGRPT
Sequences:
>Translated_348_residues MFCPAFYRYDAQPDSLTTKHNIMNAMRDWLERRQITLYFSAILLAVLLACTFPDGARFSTAITPALALMLYATFLQLPFA ELRHAFSRPRFLLPLLLTQFLLIPALVALLLPLLPHDPLLRLGVLLVLLSPCIDYVVTFAQLGRADARLLLAATPLLLLL QVLLLPLYLHLLLGGQAASVVRPAPFIEAFIGLIVLPLGLAALTQRVCRRSRRGQAIAGGLTLLPVPSTALVLGIVVATT LPQLSDAITLIWRVIPLYLTFAVAAPLTGWTVARLFRLEAPAGRALAFSAATRNSLVVLPLALAVPGATPLLPAVIVAQT VVELASELIYIRLIPRLGSRGKEAGRPT >Mature_348_residues MFCPAFYRYDAQPDSLTTKHNIMNAMRDWLERRQITLYFSAILLAVLLACTFPDGARFSTAITPALALMLYATFLQLPFA ELRHAFSRPRFLLPLLLTQFLLIPALVALLLPLLPHDPLLRLGVLLVLLSPCIDYVVTFAQLGRADARLLLAATPLLLLL QVLLLPLYLHLLLGGQAASVVRPAPFIEAFIGLIVLPLGLAALTQRVCRRSRRGQAIAGGLTLLPVPSTALVLGIVVATT LPQLSDAITLIWRVIPLYLTFAVAAPLTGWTVARLFRLEAPAGRALAFSAATRNSLVVLPLALAVPGATPLLPAVIVAQT VVELASELIYIRLIPRLGSRGKEAGRPT
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37727; Mature: 37727
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCPAFYRYDAQPDSLTTKHNIMNAMRDWLERRQITLYFSAILLAVLLACTFPDGARFST CCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AITPALALMLYATFLQLPFAELRHAFSRPRFLLPLLLTQFLLIPALVALLLPLLPHDPLL HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RLGVLLVLLSPCIDYVVTFAQLGRADARLLLAATPLLLLLQVLLLPLYLHLLLGGQAASV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VRPAPFIEAFIGLIVLPLGLAALTQRVCRRSRRGQAIAGGLTLLPVPSTALVLGIVVATT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCHHHHHHHHHHHHH LPQLSDAITLIWRVIPLYLTFAVAAPLTGWTVARLFRLEAPAGRALAFSAATRNSLVVLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHCCCCEEEEH LALAVPGATPLLPAVIVAQTVVELASELIYIRLIPRLGSRGKEAGRPT HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFCPAFYRYDAQPDSLTTKHNIMNAMRDWLERRQITLYFSAILLAVLLACTFPDGARFST CCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AITPALALMLYATFLQLPFAELRHAFSRPRFLLPLLLTQFLLIPALVALLLPLLPHDPLL HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RLGVLLVLLSPCIDYVVTFAQLGRADARLLLAATPLLLLLQVLLLPLYLHLLLGGQAASV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VRPAPFIEAFIGLIVLPLGLAALTQRVCRRSRRGQAIAGGLTLLPVPSTALVLGIVVATT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCHHHHHHHHHHHHH LPQLSDAITLIWRVIPLYLTFAVAAPLTGWTVARLFRLEAPAGRALAFSAATRNSLVVLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHCCCCEEEEH LALAVPGATPLLPAVIVAQTVVELASELIYIRLIPRLGSRGKEAGRPT HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA