| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is manX [H]
Identifier: 238920699
GI number: 238920699
Start: 2703762
End: 2704202
Strand: Reverse
Name: manX [H]
Synonym: NT01EI_2812
Alternate gene names: 238920699
Gene position: 2704202-2703762 (Counterclockwise)
Preceding gene: 238920700
Following gene: 238920698
Centisome position: 70.93
GC content: 64.17
Gene sequence:
>441_bases ATGATTGGTCTTGTCATTTCCGGGCACATCCATTTTGCAACCGGCATGGCCTCCGCCGTGCACGCCATCGCCGGCGATCA GCCGCAGATGCGCTTTATCGATTTTGTTGAATCCATGTCGACCGACGATCTGGAGGAGGCGCTGCGCCAGGCGGCCGATG AGGTCGACGACGGGGAGGGGGTGCTGTTCCTGACCGACCTGCCGGGGGGCTCGCCATGCAACCGCGCGCTGAACGTACTG ATGCGCCGTGAGGGCGTTGAGGTGCTGGCCGGGGTCAACCTGCCGATGATCGCCAACGCCGCCTTTGAGCGCGACGGTGC GACGCTGGCGGAGCTGGTGGCCGTTCTGCAGGAGATTGGCGCCAGCAGCGTACAGAATATGCGTCAGACGCTGGAAGCCG CGATGGCCCCCGTCGAATGCGAAGCGAGCGACGGACTGTAA
Upstream 100 bases:
>100_bases GCGTCGTCGGCCACCTGATGGGTCTTCTGTAATCGTCGCTCCCCGCGCCATCATCGATGGGCGGGGAGTTTACCAATGAG TCAGTTGTAAGGGTTATTCC
Downstream 100 bases:
>100_bases ACCATGTTAACCGCCTACCTGGCCGACAGCGTATTTACCCCCCGGGGGATTGAACGGGACGTCGCCGTGCTGGTTGACGA CGGCGTGATCACCGGTATCG
Product: PTS system, N-acetylgalactosamine-specific IIA component
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIGLVISGHIHFATGMASAVHAIAGDQPQMRFIDFVESMSTDDLEEALRQAADEVDDGEGVLFLTDLPGGSPCNRALNVL MRREGVEVLAGVNLPMIANAAFERDGATLAELVAVLQEIGASSVQNMRQTLEAAMAPVECEASDGL
Sequences:
>Translated_146_residues MIGLVISGHIHFATGMASAVHAIAGDQPQMRFIDFVESMSTDDLEEALRQAADEVDDGEGVLFLTDLPGGSPCNRALNVL MRREGVEVLAGVNLPMIANAAFERDGATLAELVAVLQEIGASSVQNMRQTLEAAMAPVECEASDGL >Mature_146_residues MIGLVISGHIHFATGMASAVHAIAGDQPQMRFIDFVESMSTDDLEEALRQAADEVDDGEGVLFLTDLPGGSPCNRALNVL MRREGVEVLAGVNLPMIANAAFERDGATLAELVAVLQEIGASSVQNMRQTLEAAMAPVECEASDGL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=128, Percent_Identity=34.375, Blast_Score=73, Evalue=8e-15, Organism=Escherichia coli, GI1786321, Length=127, Percent_Identity=32.2834645669291, Blast_Score=66, Evalue=8e-13,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 15384; Mature: 15384
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLVISGHIHFATGMASAVHAIAGDQPQMRFIDFVESMSTDDLEEALRQAADEVDDGEG CEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC VLFLTDLPGGSPCNRALNVLMRREGVEVLAGVNLPMIANAAFERDGATLAELVAVLQEIG EEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHC ASSVQNMRQTLEAAMAPVECEASDGL HHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIGLVISGHIHFATGMASAVHAIAGDQPQMRFIDFVESMSTDDLEEALRQAADEVDDGEG CEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC VLFLTDLPGGSPCNRALNVLMRREGVEVLAGVNLPMIANAAFERDGATLAELVAVLQEIG EEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHC ASSVQNMRQTLEAAMAPVECEASDGL HHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]