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The map label for this gene is yeeY [H]

Identifier: 238920687

GI number: 238920687

Start: 2690626

End: 2691528

Strand: Direct

Name: yeeY [H]

Synonym: NT01EI_2800

Alternate gene names: 238920687

Gene position: 2690626-2691528 (Clockwise)

Preceding gene: 238920683

Following gene: 238920688

Centisome position: 70.58

GC content: 60.8

Gene sequence:

>903_bases
ATGCGTATAAATCTGGAGGTACTGCTGATCCTCGATGCGCTGGATCGACACGGCAGCTTCGCGGCGGCTGCCCAGTCGCT
GTATAAAACCCCCGCCGCCCTGAGTTACATGGTGCAAAAGCTGGAAAGCAACCTGAATCTGCAACTGCTCGACCGCAGCG
GCCATCGCGCACGCTTTACCCGTTCTGGACGCATCATTCTGGAAAAGGGGCGCCGCCTGCTGAGCGAGGCGCAGGAGCTG
GAGCTACAGGCGACGCTGCTGGAGTCAGGCTGGGAAATGGAGATTTTCATTGCGCTGGAGGGTTACATCCTGCCGCACAC
TCTCGACCCGGTTATCGGTGCCTTCATTCAGGCACACCCTCATACCCGTCTGCACCTGATGCCCCATACACCAACGCATA
ACGGGCAAAGCGGCGAGCCCGGCGTTATGGCTGATATCATCATTGGGACGGCCCCCCTGCTGCCGGAGAATAGCGACTAT
ACCTATCAAAGCCTGGGCTATATCGATACCCTGCTGGCGATGACGCCCGATCATCCCCTGAGCCGCAGCGGGCACCCGCT
GACGCCGGATCAGCTCGGAGAGCAGCGAACCATCGTAATGGGTGATAGGCTCGCTGTCAGCCCCGCCACCGTGGGGCAGG
AGACACCGCAACATATCGTGGTCTATGATCCGGCATACCAAATCAGCCTATTGCTTAGCGGCGCAGGGATCGGCTACCTG
CCGCGACATGCCATACGTCCCTACCTGACACAGCGTCGCCTCAGCGCGCCCCCCCTGACATTTACCCCTGCACACGAGGC
AGCCTACGTCGGCTGGCGCCACACCAAGGCGGGACACGCCGCACAGTGGTGGCGAGAGCACCTGCTGAACGGCGACCTTC
ATCCCGCACTGTTTGGCGATTAA

Upstream 100 bases:

>100_bases
TATGCAATTCCCATATTTTTCTGACGGGTCATACCCTGTTCACGCCCGACGAACAGCGGGTCGGCCGTCAGCACGCGGTG
CACCCCGGACGGAGCCGCCC

Downstream 100 bases:

>100_bases
TCGGGGCCGCTTTATCCTGACGCAGTACGATCAATGCGTATCGTGCTGCGGGCAGATTGCCACGTTATCCTTACACACCA
CATTTAATTAATCAGCTAAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRINLEVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFTRSGRIILEKGRRLLSEAQEL
ELQATLLESGWEMEIFIALEGYILPHTLDPVIGAFIQAHPHTRLHLMPHTPTHNGQSGEPGVMADIIIGTAPLLPENSDY
TYQSLGYIDTLLAMTPDHPLSRSGHPLTPDQLGEQRTIVMGDRLAVSPATVGQETPQHIVVYDPAYQISLLLSGAGIGYL
PRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLHPALFGD

Sequences:

>Translated_300_residues
MRINLEVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFTRSGRIILEKGRRLLSEAQEL
ELQATLLESGWEMEIFIALEGYILPHTLDPVIGAFIQAHPHTRLHLMPHTPTHNGQSGEPGVMADIIIGTAPLLPENSDY
TYQSLGYIDTLLAMTPDHPLSRSGHPLTPDQLGEQRTIVMGDRLAVSPATVGQETPQHIVVYDPAYQISLLLSGAGIGYL
PRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLHPALFGD
>Mature_300_residues
MRINLEVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFTRSGRIILEKGRRLLSEAQEL
ELQATLLESGWEMEIFIALEGYILPHTLDPVIGAFIQAHPHTRLHLMPHTPTHNGQSGEPGVMADIIIGTAPLLPENSDY
TYQSLGYIDTLLAMTPDHPLSRSGHPLTPDQLGEQRTIVMGDRLAVSPATVGQETPQHIVVYDPAYQISLLLSGAGIGYL
PRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLHPALFGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=291, Percent_Identity=41.2371134020619, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1789492, Length=294, Percent_Identity=31.9727891156463, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787949, Length=283, Percent_Identity=24.7349823321555, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1786508, Length=302, Percent_Identity=24.8344370860927, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1786713, Length=282, Percent_Identity=24.113475177305, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790262, Length=260, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33259; Mature: 33259

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINLEVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFT
CEEEEEEEEEEEHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEE
RSGRIILEKGRRLLSEAQELELQATLLESGWEMEIFIALEGYILPHTLDPVIGAFIQAHP
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECEECCCHHHHHHHHHHHCCC
HTRLHLMPHTPTHNGQSGEPGVMADIIIGTAPLLPENSDYTYQSLGYIDTLLAMTPDHPL
CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
SRSGHPLTPDQLGEQRTIVMGDRLAVSPATVGQETPQHIVVYDPAYQISLLLSGAGIGYL
CCCCCCCCHHHCCCCEEEEECCCEEECCHHCCCCCCCEEEEECCCEEEEEEEECCCCCCC
PRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLHPALFGD
CHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRINLEVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFT
CEEEEEEEEEEEHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEE
RSGRIILEKGRRLLSEAQELELQATLLESGWEMEIFIALEGYILPHTLDPVIGAFIQAHP
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECEECCCHHHHHHHHHHHCCC
HTRLHLMPHTPTHNGQSGEPGVMADIIIGTAPLLPENSDYTYQSLGYIDTLLAMTPDHPL
CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
SRSGHPLTPDQLGEQRTIVMGDRLAVSPATVGQETPQHIVVYDPAYQISLLLSGAGIGYL
CCCCCCCCHHHCCCCEEEEECCCEEECCHHCCCCCCCEEEEECCCEEEEEEEECCCCCCC
PRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLHPALFGD
CHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]