Click here to switch to the map view.

The map label for this gene is ybiT [H]

Identifier: 238920685

GI number: 238920685

Start: 2688454

End: 2690049

Strand: Reverse

Name: ybiT [H]

Synonym: NT01EI_2798

Alternate gene names: 238920685

Gene position: 2690049-2688454 (Counterclockwise)

Preceding gene: 238920686

Following gene: 238920684

Centisome position: 70.56

GC content: 58.96

Gene sequence:

>1596_bases
GTGCTGATAAGTAACAACATCACCATGCAGTTTGGCAGTAAGCCGCTGTTTGAGAATATTTCTGTCAAATTTGGCGGTGG
AAACCGCTACGGCCTGATCGGCGCTAACGGCTGCGGTAAGTCGACGCTGATGAAGATCCTCGGCGGCGATCTGCAGCCGA
CGGCCGGGAACGTCGCGCTGGATCCGAATGAGCGTCTGGGTAAGCTGCGTCAGGATCAATTCGCCTTTGAAAAATACAGT
GTGATCGATACGGTCATCATGGGGCACCAGGAGCTGTGGGCGGTGAAAGAGGAGCGCGATCGTATCTACGCGCTGGCGGA
GATGAGCGAAGAGGAGGGATACCGCGTCGCCGATCTGGAGGTCGCCTACGGTGAAATGGACGGCTACAGCGCCGAGGCCC
GCGCCGGTGAACTGCTGCTGGGCGTCGGCATCCCGGTCGAACAGCACTATGGTACCATGAGCGAAGTGGCGCCGGGCTGG
AAGCTGCGCGTGCTGCTGGCGCAGGCGCTGTTTTCCGATCCGGATATCCTGCTGCTCGACGAACCGACCAACAACCTGGA
TATCGATACCATCCGCTGGCTGGAGACGGTGCTGAACGAGCGCAACAGTACCATGATCATCATCTCCCATGACCGCCATT
TTCTGAATATGGTGTGCACCCATATGGCCGATCTGGACTACGGCGAGCTGCGCATTTACCCGGGCAACTATGATGACTAT
ATGACGGCGGCCACCCAGGCCCGCGAGCGCCTGCTGGCGGATAACGCCAAGAAAAAGGCGCAGATCGCAGAGCTGCAGTC
GTTCGTCAGCCGCTTTAGCGCTAACGCCTCTAAGTCGCGCCAGGCCACCTCGCGCGCCCGTCAGATCGATAAGATCAAGC
TGGACGATGTGAAGGCTTCCAGCCGTCAGAACCCGTTCATCCGCTTTGAGCAGGAGAAAAAGCTGTTCCGCAACGCGCTG
GAGTTGACGGACCTGAGCAAAGGCTTCGATAACGGCCCGCTGTTCAGCGGGGTAAAGCTGCTGCTGGAGGCCGGCGAGAA
GCTGGCGGTACTGGGGACTAACGGCGTCGGTAAATCCACCCTGCTGAAAACCCTGGTTGGCGATCTGACGCCGGACGCCG
GCGGCGTCAAGTGGGCTGAAAACGCCCAGATAGGCTACTACGCGCAGGATCACGAGTATGAGTTTGAGCAGGATATGACC
CTGTTCGACTGGATGAGCCAGTGGCGCCAACAGGGCGATGACGAGCAGGCCGTGCGCGGGTTCCTCGGTCGTCTGCTGTT
TAGCCAGGAGGATATCAAAAAGTCGGTTAAGGTGCTCTCCGGCGGTGAGAAGGGGCGTCTGCTGTTCGGTAAGCTGATGA
TGCGCCGCCCCAACGTCCTGGTGATGGATGAGCCGACCAACCATATGGACATGGAGTCGATCGAGGCGCTGAACATTGCG
CTGGAGCTGTATCAGGGAACGCTGATCTTTGTCTCTCACGACCGCGAGTTTGTCAGTTCGCTGGCGACCCGGATCGTGGA
GATCACCCCGCAGAAGGTGGTGGACTTTGGCGGCGGCTACGAAGAGTACCTGCGCAGTAAAGGCGTCGATGAGTAA

Upstream 100 bases:

>100_bases
CACGGGCCACCCTGGGGCGTGTACCACGCAGTGGACGACATTTGTGCTGTGTCTGTGGCATAATGTGAACAAAATCACGT
TAACCTATTGAGATTGTGCT

Downstream 100 bases:

>100_bases
ACGAACGGCCCTGTGGGGCCGTTTTTTTTCGGGGCACTGCGGCGGCAGTGCGCGCGTTGTCGCACGGCTGACGCCGCGCG
ATGCTCTGTTTTGTCGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MLISNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTLMKILGGDLQPTAGNVALDPNERLGKLRQDQFAFEKYS
VIDTVIMGHQELWAVKEERDRIYALAEMSEEEGYRVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGTMSEVAPGW
KLRVLLAQALFSDPDILLLDEPTNNLDIDTIRWLETVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRIYPGNYDDY
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLDDVKASSRQNPFIRFEQEKKLFRNAL
ELTDLSKGFDNGPLFSGVKLLLEAGEKLAVLGTNGVGKSTLLKTLVGDLTPDAGGVKWAENAQIGYYAQDHEYEFEQDMT
LFDWMSQWRQQGDDEQAVRGFLGRLLFSQEDIKKSVKVLSGGEKGRLLFGKLMMRRPNVLVMDEPTNHMDMESIEALNIA
LELYQGTLIFVSHDREFVSSLATRIVEITPQKVVDFGGGYEEYLRSKGVDE

Sequences:

>Translated_531_residues
MLISNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTLMKILGGDLQPTAGNVALDPNERLGKLRQDQFAFEKYS
VIDTVIMGHQELWAVKEERDRIYALAEMSEEEGYRVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGTMSEVAPGW
KLRVLLAQALFSDPDILLLDEPTNNLDIDTIRWLETVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRIYPGNYDDY
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLDDVKASSRQNPFIRFEQEKKLFRNAL
ELTDLSKGFDNGPLFSGVKLLLEAGEKLAVLGTNGVGKSTLLKTLVGDLTPDAGGVKWAENAQIGYYAQDHEYEFEQDMT
LFDWMSQWRQQGDDEQAVRGFLGRLLFSQEDIKKSVKVLSGGEKGRLLFGKLMMRRPNVLVMDEPTNHMDMESIEALNIA
LELYQGTLIFVSHDREFVSSLATRIVEITPQKVVDFGGGYEEYLRSKGVDE
>Mature_531_residues
MLISNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTLMKILGGDLQPTAGNVALDPNERLGKLRQDQFAFEKYS
VIDTVIMGHQELWAVKEERDRIYALAEMSEEEGYRVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGTMSEVAPGW
KLRVLLAQALFSDPDILLLDEPTNNLDIDTIRWLETVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRIYPGNYDDY
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLDDVKASSRQNPFIRFEQEKKLFRNAL
ELTDLSKGFDNGPLFSGVKLLLEAGEKLAVLGTNGVGKSTLLKTLVGDLTPDAGGVKWAENAQIGYYAQDHEYEFEQDMT
LFDWMSQWRQQGDDEQAVRGFLGRLLFSQEDIKKSVKVLSGGEKGRLLFGKLMMRRPNVLVMDEPTNHMDMESIEALNIA
LELYQGTLIFVSHDREFVSSLATRIVEITPQKVVDFGGGYEEYLRSKGVDE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=32.391713747646, Blast_Score=259, Evalue=5e-69,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=29.2134831460674, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=29.0262172284644, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=30.550284629981, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=30.550284629981, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI42741659, Length=318, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=86.6037735849057, Blast_Score=979, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=529, Percent_Identity=32.8922495274102, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787182, Length=501, Percent_Identity=31.936127744511, Blast_Score=239, Evalue=5e-64,
Organism=Escherichia coli, GI2367384, Length=528, Percent_Identity=29.3560606060606, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1786975, Length=534, Percent_Identity=22.0973782771536, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87081791, Length=231, Percent_Identity=29.4372294372294, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=184, Percent_Identity=32.6086956521739, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=28.4518828451883, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=26.6355140186916, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788225, Length=229, Percent_Identity=25.3275109170306, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=26.0162601626016, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787164, Length=221, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=24.5283018867925, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=24.390243902439, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=27.7227722772277, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87081782, Length=214, Percent_Identity=27.5700934579439, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790525, Length=481, Percent_Identity=23.2848232848233, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=195, Percent_Identity=25.6410256410256, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI48994943, Length=227, Percent_Identity=28.6343612334802, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786803, Length=238, Percent_Identity=26.890756302521, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87082064, Length=206, Percent_Identity=27.1844660194175, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=535, Percent_Identity=29.7196261682243, Blast_Score=241, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI17553372, Length=531, Percent_Identity=31.2617702448211, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=28.7569573283859, Blast_Score=227, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=30.6238185255198, Blast_Score=255, Evalue=1e-68,
Organism=Saccharomyces cerevisiae, GI6321121, Length=514, Percent_Identity=31.5175097276265, Blast_Score=236, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6325030, Length=426, Percent_Identity=27.9342723004695, Blast_Score=140, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=423, Percent_Identity=25.531914893617, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=96, Percent_Identity=39.5833333333333, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=32.5187969924812, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24642252, Length=540, Percent_Identity=30.1851851851852, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI18859989, Length=540, Percent_Identity=30.1851851851852, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI24641342, Length=539, Percent_Identity=29.3135435992579, Blast_Score=231, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59550; Mature: 59550

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTLMKILGGDLQPTAGNVAL
CEECCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
DPNERLGKLRQDQFAFEKYSVIDTVIMGHQELWAVKEERDRIYALAEMSEEEGYRVADLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHCCCCEEEEEE
VAYGEMDGYSAEARAGELLLGVGIPVEQHYGTMSEVAPGWKLRVLLAQALFSDPDILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLETVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRIYPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHH
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLDDVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCC
SRQNPFIRFEQEKKLFRNALELTDLSKGFDNGPLFSGVKLLLEAGEKLAVLGTNGVGKST
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHH
LLKTLVGDLTPDAGGVKWAENAQIGYYAQDHEYEFEQDMTLFDWMSQWRQQGDDEQAVRG
HHHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHH
FLGRLLFSQEDIKKSVKVLSGGEKGRLLFGKLMMRRPNVLVMDEPTNHMDMESIEALNIA
HHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LELYQGTLIFVSHDREFVSSLATRIVEITPQKVVDFGGGYEEYLRSKGVDE
HEEECCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLISNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTLMKILGGDLQPTAGNVAL
CEECCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
DPNERLGKLRQDQFAFEKYSVIDTVIMGHQELWAVKEERDRIYALAEMSEEEGYRVADLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHCCCCEEEEEE
VAYGEMDGYSAEARAGELLLGVGIPVEQHYGTMSEVAPGWKLRVLLAQALFSDPDILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLETVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRIYPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHH
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLDDVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCC
SRQNPFIRFEQEKKLFRNALELTDLSKGFDNGPLFSGVKLLLEAGEKLAVLGTNGVGKST
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHH
LLKTLVGDLTPDAGGVKWAENAQIGYYAQDHEYEFEQDMTLFDWMSQWRQQGDDEQAVRG
HHHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHH
FLGRLLFSQEDIKKSVKVLSGGEKGRLLFGKLMMRRPNVLVMDEPTNHMDMESIEALNIA
HHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LELYQGTLIFVSHDREFVSSLATRIVEITPQKVVDFGGGYEEYLRSKGVDE
HEEECCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]