| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yihN [C]
Identifier: 238920669
GI number: 238920669
Start: 2677160
End: 2677420
Strand: Direct
Name: yihN [C]
Synonym: NT01EI_2782
Alternate gene names: 238920669
Gene position: 2677160-2677420 (Clockwise)
Preceding gene: 238920668
Following gene: 238920671
Centisome position: 70.22
GC content: 60.15
Gene sequence:
>261_bases GTGCGGGTCTACCCACGTGATGAAGGTCCCCTGAGTCAGGTACAGAGCCAAATCCGCGCCGATATCCCGGCCCAGCGCCA GCATCACCAGCACAGCAGGCTCACCTTTATCCTGACGCCGCATGAAGATCTGAAAAGCCATGGGCTGGCGGCGCTGATCG CTACCGGCCTGATCGGCCTGTACCTGAGCACCATGCCGGGCTACAGAGGGATCCTGTTGGTTCAGACACTGTTCGGCGTT ACCTGCGACATGCTCAACTGA
Upstream 100 bases:
>100_bases TGCAAGAGGCCTCACACCTCATCACGCTCTCCCGCCGTATCTATTGTTTGTACAGACGCACCGAACTGGCGCCCTCGCCG AGGAGTACGGCTCCAGTTCG
Downstream 100 bases:
>100_bases CCGGTGCTGCTCAAGTCCGTCAGCCTGACGGGGATAATACCTGGCAAGGGCGCCTGTCCGGCTTCTTTGAGACCAGACGC GGCGTGGCTGATACCGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MRVYPRDEGPLSQVQSQIRADIPAQRQHHQHSRLTFILTPHEDLKSHGLAALIATGLIGLYLSTMPGYRGILLVQTLFGV TCDMLN
Sequences:
>Translated_86_residues MRVYPRDEGPLSQVQSQIRADIPAQRQHHQHSRLTFILTPHEDLKSHGLAALIATGLIGLYLSTMPGYRGILLVQTLFGV TCDMLN >Mature_86_residues MRVYPRDEGPLSQVQSQIRADIPAQRQHHQHSRLTFILTPHEDLKSHGLAALIATGLIGLYLSTMPGYRGILLVQTLFGV TCDMLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790306, Length=36, Percent_Identity=75, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9608; Mature: 9608
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYPRDEGPLSQVQSQIRADIPAQRQHHQHSRLTFILTPHEDLKSHGLAALIATGLIGL CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHH YLSTMPGYRGILLVQTLFGVTCDMLN HHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVYPRDEGPLSQVQSQIRADIPAQRQHHQHSRLTFILTPHEDLKSHGLAALIATGLIGL CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHH YLSTMPGYRGILLVQTLFGVTCDMLN HHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA