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The map label for this gene is yfcN [C]

Identifier: 238920644

GI number: 238920644

Start: 2655468

End: 2656049

Strand: Direct

Name: yfcN [C]

Synonym: NT01EI_2756

Alternate gene names: 238920644

Gene position: 2655468-2656049 (Clockwise)

Preceding gene: 238920640

Following gene: 238920647

Centisome position: 69.65

GC content: 61.17

Gene sequence:

>582_bases
GTGATTATCAGTAAGAAATCAGCGAACCGTCACAGTATGAGCAAGAAACATTCCATCAACGGCGATGACGCCGCCCTGTT
CCACACCGTCGTCGCCGGTATCCGCCCCCTGAGCCAGGACAAGGTGACCCATCGCCCGGCGCGCCTGACGCGCCAGGTGG
CGCCGCAAAAGGTGTTGCAGGAGCAGATCGACGCCAGCTTCTATTTTTCCGATGAGTTTCAACCCAACTTAAGCAGCGAC
GGGCCGACCCATTACGTTCGCCCTGACGTCAGCCACTTTGAGCTGAAGCAGCTGCGCCGCGGCGACTATACACCAGAGAT
GTTTCTGGATCTGCACGGCCTGACCCAGCTACAGGCCAAACAGGAGCTGGGCGCGCTGATTGCCGCCTGCCGCCGTGAGC
ACCTCTGTTGCGCCTGCGTCATGCACGGTCACGGCAAACACGTCCTCAAACAGCAGACGCCGCTGTGGCTGGCACAGCAT
CCCGACATTCGCGCCTTTTACCAGGCACCGCGCGAATGGGGCGGCGATGCCGCGCTGCTGGTGCTCATTGACGTTGATGA
GCGGGAGGTGCCGCACCTCTGA

Upstream 100 bases:

>100_bases
GTATAGCGGCTGTAGTGTGCCATGAAGCCACGGACAAATCAGCAAGGATCCGCTGCCGACGGCGGTTTTACTTAGCGCGA
CGTCCATCTGCGGTTACACT

Downstream 100 bases:

>100_bases
GGCGCGGGATCCACGACGGCCGCCGTCGGATGATGGGGCCGAAGAGAAGATCAGAGGCCGTCGGCCAGCTGGGATGGGCT
CACCTGCCACTCCAGCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIISKKSANRHSMSKKHSINGDDAALFHTVVAGIRPLSQDKVTHRPARLTRQVAPQKVLQEQIDASFYFSDEFQPNLSSD
GPTHYVRPDVSHFELKQLRRGDYTPEMFLDLHGLTQLQAKQELGALIAACRREHLCCACVMHGHGKHVLKQQTPLWLAQH
PDIRAFYQAPREWGGDAALLVLIDVDEREVPHL

Sequences:

>Translated_193_residues
MIISKKSANRHSMSKKHSINGDDAALFHTVVAGIRPLSQDKVTHRPARLTRQVAPQKVLQEQIDASFYFSDEFQPNLSSD
GPTHYVRPDVSHFELKQLRRGDYTPEMFLDLHGLTQLQAKQELGALIAACRREHLCCACVMHGHGKHVLKQQTPLWLAQH
PDIRAFYQAPREWGGDAALLVLIDVDEREVPHL
>Mature_193_residues
MIISKKSANRHSMSKKHSINGDDAALFHTVVAGIRPLSQDKVTHRPARLTRQVAPQKVLQEQIDASFYFSDEFQPNLSSD
GPTHYVRPDVSHFELKQLRRGDYTPEMFLDLHGLTQLQAKQELGALIAACRREHLCCACVMHGHGKHVLKQQTPLWLAQH
PDIRAFYQAPREWGGDAALLVLIDVDEREVPHL

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=182, Percent_Identity=68.1318681318681, Blast_Score=262, Evalue=9e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 21884; Mature: 21884

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISKKSANRHSMSKKHSINGDDAALFHTVVAGIRPLSQDKVTHRPARLTRQVAPQKVLQ
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHH
EQIDASFYFSDEFQPNLSSDGPTHYVRPDVSHFELKQLRRGDYTPEMFLDLHGLTQLQAK
HHHCCEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QELGALIAACRREHLCCACVMHGHGKHVLKQQTPLWLAQHPDIRAFYQAPREWGGDAALL
HHHHHHHHHHHHCCHHEEEECCCCCHHHHHCCCCEEEECCCCHHHHHHCHHHCCCCEEEE
VLIDVDEREVPHL
EEEECCCCCCCCC
>Mature Secondary Structure
MIISKKSANRHSMSKKHSINGDDAALFHTVVAGIRPLSQDKVTHRPARLTRQVAPQKVLQ
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHH
EQIDASFYFSDEFQPNLSSDGPTHYVRPDVSHFELKQLRRGDYTPEMFLDLHGLTQLQAK
HHHCCEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QELGALIAACRREHLCCACVMHGHGKHVLKQQTPLWLAQHPDIRAFYQAPREWGGDAALL
HHHHHHHHHHHHCCHHEEEECCCCCHHHHHCCCCEEEECCCCHHHHHHCHHHCCCCEEEE
VLIDVDEREVPHL
EEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]