Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is yfcM [H]

Identifier: 238920618

GI number: 238920618

Start: 2622637

End: 2623185

Strand: Reverse

Name: yfcM [H]

Synonym: NT01EI_2730

Alternate gene names: 238920618

Gene position: 2623185-2622637 (Counterclockwise)

Preceding gene: 238920619

Following gene: 238920617

Centisome position: 68.81

GC content: 60.11

Gene sequence:

>549_bases
ATGCCCGAGATCCATCATTATCAGCAGTTAATCGATCTGTTCGCGCAGACGTTCGGCAGCGAATACCATACCCGCCTGGT
GGCCGGCGACGGCGAACCTATCTATCTGCCGGCGGATGACGCGCATCCGGAGCACCGCATTCTGTTTGCCCATGGCTACT
ATGCCAGCGCGCTGCATGAGATCTCACACTGGTGCATCGCCGGGGAGGCACGTCGCCGCCTGGAGGACTATGGCTATTGG
TACTGCCCGGACGGGCGGGATACCGACACGCAGTCGCGCTTTGAGGCGGTAGAGATTAAGCCACAGGCACTGGACTGGCT
GTTCTGCGTTGCTGCCGGCTATCCCTTTAACGTCAGCTGCGATAATCTGGAGGGCACCTTCGAGCCGGATCGCATCGCGT
TTCAGCGCCGGGTGCGTGAACAGGTGCTGATCTATCTGGCCGGGGGCATCCCCCCGCGTCCGGCGCAGTTTATCCGTACG
CTTCAGGCGTTTTATCATACGCCGGCACTGAGTGCCGCTGACTTTCCCTATCCCGACGATTTACAGTGA

Upstream 100 bases:

>100_bases
CGCGGCGGATGCAAGGCGGCGGCGCCTGTGCGACAATCTGCCACCGTGATGCGGCGCCGTGGCGCCGCACGTTATTTTCT
CATCAGGCCCAGAGATAACC

Downstream 100 bases:

>100_bases
TGCGCGGTGCAGCTGACGCCGATACGCAAGGAATCCCCATGATTGTAGAGTTTGAAGAGCGTATTTTGACGCTGATTGAT
GAGATGGTTGACAGCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPEIHHYQQLIDLFAQTFGSEYHTRLVAGDGEPIYLPADDAHPEHRILFAHGYYASALHEISHWCIAGEARRRLEDYGYW
YCPDGRDTDTQSRFEAVEIKPQALDWLFCVAAGYPFNVSCDNLEGTFEPDRIAFQRRVREQVLIYLAGGIPPRPAQFIRT
LQAFYHTPALSAADFPYPDDLQ

Sequences:

>Translated_182_residues
MPEIHHYQQLIDLFAQTFGSEYHTRLVAGDGEPIYLPADDAHPEHRILFAHGYYASALHEISHWCIAGEARRRLEDYGYW
YCPDGRDTDTQSRFEAVEIKPQALDWLFCVAAGYPFNVSCDNLEGTFEPDRIAFQRRVREQVLIYLAGGIPPRPAQFIRT
LQAFYHTPALSAADFPYPDDLQ
>Mature_181_residues
PEIHHYQQLIDLFAQTFGSEYHTRLVAGDGEPIYLPADDAHPEHRILFAHGYYASALHEISHWCIAGEARRRLEDYGYWY
CPDGRDTDTQSRFEAVEIKPQALDWLFCVAAGYPFNVSCDNLEGTFEPDRIAFQRRVREQVLIYLAGGIPPRPAQFIRTL
QAFYHTPALSAADFPYPDDLQ

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=182, Percent_Identity=68.6813186813187, Blast_Score=277, Evalue=4e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20937; Mature: 20805

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEIHHYQQLIDLFAQTFGSEYHTRLVAGDGEPIYLPADDAHPEHRILFAHGYYASALHE
CCCHHHHHHHHHHHHHHHCCCHHEEEEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHH
ISHWCIAGEARRRLEDYGYWYCPDGRDTDTQSRFEAVEIKPQALDWLFCVAAGYPFNVSC
HHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHEEEEECHHHHHHHHHHHCCCCCCCEE
DNLEGTFEPDRIAFQRRVREQVLIYLAGGIPPRPAQFIRTLQAFYHTPALSAADFPYPDD
CCCCCCCCHHHHHHHHHHHHHHEEHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LQ
CC
>Mature Secondary Structure 
PEIHHYQQLIDLFAQTFGSEYHTRLVAGDGEPIYLPADDAHPEHRILFAHGYYASALHE
CCHHHHHHHHHHHHHHHCCCHHEEEEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHH
ISHWCIAGEARRRLEDYGYWYCPDGRDTDTQSRFEAVEIKPQALDWLFCVAAGYPFNVSC
HHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHEEEEECHHHHHHHHHHHCCCCCCCEE
DNLEGTFEPDRIAFQRRVREQVLIYLAGGIPPRPAQFIRTLQAFYHTPALSAADFPYPDD
CCCCCCCCHHHHHHHHHHHHHHEEHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]