| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yfcL [H]
Identifier: 238920617
GI number: 238920617
Start: 2622317
End: 2622598
Strand: Reverse
Name: yfcL [H]
Synonym: NT01EI_2729
Alternate gene names: 238920617
Gene position: 2622598-2622317 (Counterclockwise)
Preceding gene: 238920618
Following gene: 238920615
Centisome position: 68.79
GC content: 62.77
Gene sequence:
>282_bases ATGATTGTAGAGTTTGAAGAGCGTATTTTGACGCTGATTGATGAGATGGTTGACAGCGCCAGCGACGATGCGCTGTTTGC CGGCGGCTACCTGCGTGGCCACCTGACCCTGGCTGTGGCGGAGATCGCCCTGCAGCCGCAGGCCGTGCCCGCGATGCTGG ATGCGGCGGTGCGCGCCAGTCTGGCGCGCGCCATTCACGCCGGAGAGCTCTCCCCGCCCGATCAGGCGCTGGTATACAAC CTATGGCAGGATCTCTACCATCGGGCTCAGCATGAGGCATGA
Upstream 100 bases:
>100_bases CGTTTTATCATACGCCGGCACTGAGTGCCGCTGACTTTCCCTATCCCGACGATTTACAGTGATGCGCGGTGCAGCTGACG CCGATACGCAAGGAATCCCC
Downstream 100 bases:
>100_bases GGCATGAGGCATGAGGCATGAGGAATGAGGCATGAGGCTGGGTCTCTTTCGCGTGGTCAGGGGAGGGCAGGGTGAATCGC GGCTTTGTGAATGGATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRASLARAIHAGELSPPDQALVYN LWQDLYHRAQHEA
Sequences:
>Translated_93_residues MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRASLARAIHAGELSPPDQALVYN LWQDLYHRAQHEA >Mature_93_residues MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRASLARAIHAGELSPPDQALVYN LWQDLYHRAQHEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788665, Length=92, Percent_Identity=56.5217391304348, Blast_Score=102, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014987 [H]
Pfam domain/function: PF08891 YfcL [H]
EC number: NA
Molecular weight: Translated: 10183; Mature: 10183
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRAS CCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LARAIHAGELSPPDQALVYNLWQDLYHRAQHEA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRAS CCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LARAIHAGELSPPDQALVYNLWQDLYHRAQHEA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]