Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is yfcL [H]

Identifier: 238920617

GI number: 238920617

Start: 2622317

End: 2622598

Strand: Reverse

Name: yfcL [H]

Synonym: NT01EI_2729

Alternate gene names: 238920617

Gene position: 2622598-2622317 (Counterclockwise)

Preceding gene: 238920618

Following gene: 238920615

Centisome position: 68.79

GC content: 62.77

Gene sequence:

>282_bases
ATGATTGTAGAGTTTGAAGAGCGTATTTTGACGCTGATTGATGAGATGGTTGACAGCGCCAGCGACGATGCGCTGTTTGC
CGGCGGCTACCTGCGTGGCCACCTGACCCTGGCTGTGGCGGAGATCGCCCTGCAGCCGCAGGCCGTGCCCGCGATGCTGG
ATGCGGCGGTGCGCGCCAGTCTGGCGCGCGCCATTCACGCCGGAGAGCTCTCCCCGCCCGATCAGGCGCTGGTATACAAC
CTATGGCAGGATCTCTACCATCGGGCTCAGCATGAGGCATGA

Upstream 100 bases:

>100_bases
CGTTTTATCATACGCCGGCACTGAGTGCCGCTGACTTTCCCTATCCCGACGATTTACAGTGATGCGCGGTGCAGCTGACG
CCGATACGCAAGGAATCCCC

Downstream 100 bases:

>100_bases
GGCATGAGGCATGAGGCATGAGGAATGAGGCATGAGGCTGGGTCTCTTTCGCGTGGTCAGGGGAGGGCAGGGTGAATCGC
GGCTTTGTGAATGGATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRASLARAIHAGELSPPDQALVYN
LWQDLYHRAQHEA

Sequences:

>Translated_93_residues
MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRASLARAIHAGELSPPDQALVYN
LWQDLYHRAQHEA
>Mature_93_residues
MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRASLARAIHAGELSPPDQALVYN
LWQDLYHRAQHEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788665, Length=92, Percent_Identity=56.5217391304348, Blast_Score=102, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014987 [H]

Pfam domain/function: PF08891 YfcL [H]

EC number: NA

Molecular weight: Translated: 10183; Mature: 10183

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRAS
CCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LARAIHAGELSPPDQALVYNLWQDLYHRAQHEA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVEFEERILTLIDEMVDSASDDALFAGGYLRGHLTLAVAEIALQPQAVPAMLDAAVRAS
CCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LARAIHAGELSPPDQALVYNLWQDLYHRAQHEA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]