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The map label for this gene is dedD [H]

Identifier: 238920604

GI number: 238920604

Start: 2609226

End: 2609993

Strand: Reverse

Name: dedD [H]

Synonym: NT01EI_2716

Alternate gene names: 238920604

Gene position: 2609993-2609226 (Counterclockwise)

Preceding gene: 238920605

Following gene: 238920603

Centisome position: 68.46

GC content: 66.54

Gene sequence:

>768_bases
GTGGCAAGTAAGTTTCAGAACCGATTGGTCGGTACGGTGATCCTGGTGGCGCTGGGGGTGATCATTCTGCCCGGCCTGCT
GGATGGTCAGAAAAAGCATTATCAGGATGAGTTTGCCGCGATTCCACTGGTGCCGCGTCCGGGAGAGGACGACCCGACGG
ATGCCATTCCGCCGGTGACGCAGCCGCTGGGGGAAACGCCGTTGCCTAGCGCCAGCGCTGGCGCCGCTCCGGTAAGTGCT
GCGACGCCCTCTGCATCCGCGCCTGCGGTGGCCCCGGCACATACCCGCGGCGAGCTGGTGGAGCTGAAGCCGGTCGAGAG
CCGGGCGCCGGAGCCACCGCGTACGGCGCCACCGCCTATCAGCACTCCGTCGCCGCAGGAGAGCAGGCCGAAAGCCAGCG
AGCCGCCGACGCGGGTCGCGGAGAGCCGCCCCAAGGCCGTCGAGGCGGTGAAGAGCGTGACGCCGCCGCCAGAAAGCCGT
CCGCTGCCCGTCGCCAAGAGCGATGCTGGTGAGAAAGCGCCAGTCGGTCAGGCCTATGTGGTGCAGCTTGGCGCGCTGCG
TAACGCGGGCAAGGTGAATGAAATCATCGCCAAGCTGCGTCTGTCCGGCTACCGCGTCTATAGCGTACCGGCGACGCCGG
TGCAGGGTGAGATCAACCGGCTGTTCGTTGGCCCGGAGGCGTCGCGCGCCAAGCTGCAGTCGGCGCTGCCGGAGCTGAAC
AGTCTGAGTGGACTGAATGGGCAGATCCACAATTACAGCGTGCGCTAA

Upstream 100 bases:

>100_bases
CAGGCGATGGCCGATGCGGCCGCCGACGATACGGTGGTGGTCTGTGGTTCCTTCCATACGGTTGCTCACGTAATGGCAGC
CCTCGCGTCAGGAGAGACGG

Downstream 100 bases:

>100_bases
GCCGCGCGTAACGGTGTTCGACGGCGCTGTTCGCTGCGGCGGGCGGCGCCATTTTTTTGGTGAAAACGGACGGTCGGTGC
GACATATTTATTTATGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MASKFQNRLVGTVILVALGVIILPGLLDGQKKHYQDEFAAIPLVPRPGEDDPTDAIPPVTQPLGETPLPSASAGAAPVSA
ATPSASAPAVAPAHTRGELVELKPVESRAPEPPRTAPPPISTPSPQESRPKASEPPTRVAESRPKAVEAVKSVTPPPESR
PLPVAKSDAGEKAPVGQAYVVQLGALRNAGKVNEIIAKLRLSGYRVYSVPATPVQGEINRLFVGPEASRAKLQSALPELN
SLSGLNGQIHNYSVR

Sequences:

>Translated_255_residues
MASKFQNRLVGTVILVALGVIILPGLLDGQKKHYQDEFAAIPLVPRPGEDDPTDAIPPVTQPLGETPLPSASAGAAPVSA
ATPSASAPAVAPAHTRGELVELKPVESRAPEPPRTAPPPISTPSPQESRPKASEPPTRVAESRPKAVEAVKSVTPPPESR
PLPVAKSDAGEKAPVGQAYVVQLGALRNAGKVNEIIAKLRLSGYRVYSVPATPVQGEINRLFVGPEASRAKLQSALPELN
SLSGLNGQIHNYSVR
>Mature_254_residues
ASKFQNRLVGTVILVALGVIILPGLLDGQKKHYQDEFAAIPLVPRPGEDDPTDAIPPVTQPLGETPLPSASAGAAPVSAA
TPSASAPAVAPAHTRGELVELKPVESRAPEPPRTAPPPISTPSPQESRPKASEPPTRVAESRPKAVEAVKSVTPPPESRP
LPVAKSDAGEKAPVGQAYVVQLGALRNAGKVNEIIAKLRLSGYRVYSVPATPVQGEINRLFVGPEASRAKLQSALPELNS
LSGLNGQIHNYSVR

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=95, Percent_Identity=60, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 26602; Mature: 26470

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKFQNRLVGTVILVALGVIILPGLLDGQKKHYQDEFAAIPLVPRPGEDDPTDAIPPVT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QPLGETPLPSASAGAAPVSAATPSASAPAVAPAHTRGELVELKPVESRAPEPPRTAPPPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCC
STPSPQESRPKASEPPTRVAESRPKAVEAVKSVTPPPESRPLPVAKSDAGEKAPVGQAYV
CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VQLGALRNAGKVNEIIAKLRLSGYRVYSVPATPVQGEINRLFVGPEASRAKLQSALPELN
HHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
SLSGLNGQIHNYSVR
HHCCCCCCCCCCCCC
>Mature Secondary Structure 
ASKFQNRLVGTVILVALGVIILPGLLDGQKKHYQDEFAAIPLVPRPGEDDPTDAIPPVT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QPLGETPLPSASAGAAPVSAATPSASAPAVAPAHTRGELVELKPVESRAPEPPRTAPPPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCC
STPSPQESRPKASEPPTRVAESRPKAVEAVKSVTPPPESRPLPVAKSDAGEKAPVGQAYV
CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VQLGALRNAGKVNEIIAKLRLSGYRVYSVPATPVQGEINRLFVGPEASRAKLQSALPELN
HHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
SLSGLNGQIHNYSVR
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]